EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000016705 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 1595 bases
Position: chrJH419598.1:149746-151340
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000022117	zf-CCCH	PF00642.24	1.6e-30	1	4
ENSPNYP00000022117	zf-CCCH	PF00642.24	1.6e-30	2	4
ENSPNYP00000022117	zf-CCCH	PF00642.24	1.6e-30	3	4
ENSPNYP00000022117	zf-CCCH	PF00642.24	1.6e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000022657	-	786	-	ENSPNYP00000022117	261 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000016705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000016705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000016705	cth1	85	64.032	ENSAPOG00000012552	cth1	89	64.173	Acanthochromis_polyacanthus
ENSPNYG00000016705	cth1	88	68.914	ENSACIG00000016026	cth1	91	69.580	Amphilophus_citrinellus
ENSPNYG00000016705	cth1	85	63.953	ENSAOCG00000001644	cth1	89	64.964	Amphiprion_ocellaris
ENSPNYG00000016705	cth1	85	63.953	ENSAPEG00000008930	cth1	89	64.964	Amphiprion_percula
ENSPNYG00000016705	cth1	84	61.232	ENSATEG00000002281	cth1	90	60.596	Anabas_testudineus
ENSPNYG00000016705	cth1	91	89.655	ENSACLG00000015353	cth1	94	89.655	Astatotilapia_calliptera
ENSPNYG00000016705	cth1	88	57.651	ENSAMXG00000025717	cth1	89	58.273	Astyanax_mexicanus
ENSPNYG00000016705	cth1	85	60.370	ENSCSEG00000014617	cth1	90	61.458	Cynoglossus_semilaevis
ENSPNYG00000016705	cth1	84	57.028	ENSCVAG00000001680	cth1	58	58.555	Cyprinodon_variegatus
ENSPNYG00000016705	cth1	79	60.000	ENSDARG00000057328	cth1	87	60.507	Danio_rerio
ENSPNYG00000016705	cth1	87	58.099	ENSELUG00000012738	cth1	80	54.275	Esox_lucius
ENSPNYG00000016705	cth1	81	55.512	ENSFHEG00000022665	cth1	83	54.864	Fundulus_heteroclitus
ENSPNYG00000016705	cth1	84	59.761	ENSGMOG00000007360	cth1	87	59.925	Gadus_morhua
ENSPNYG00000016705	cth1	89	55.634	ENSGAFG00000019288	cth1	87	55.556	Gambusia_affinis
ENSPNYG00000016705	cth1	93	61.594	ENSGACG00000000802	cth1	90	61.314	Gasterosteus_aculeatus
ENSPNYG00000016705	cth1	93	89.179	ENSHBUG00000014400	cth1	91	89.179	Haplochromis_burtoni
ENSPNYG00000016705	cth1	93	55.039	ENSHCOG00000010276	cth1	89	54.264	Hippocampus_comes
ENSPNYG00000016705	cth1	87	58.759	ENSIPUG00000018040	cth1	86	58.242	Ictalurus_punctatus
ENSPNYG00000016705	cth1	84	60.000	ENSKMAG00000005944	cth1	87	61.686	Kryptolebias_marmoratus
ENSPNYG00000016705	cth1	85	61.423	ENSLBEG00000019253	cth1	90	61.972	Labrus_bergylta
ENSPNYG00000016705	cth1	67	59.877	ENSLOCG00000002047	cth1	82	60.494	Lepisosteus_oculatus
ENSPNYG00000016705	cth1	68	60.577	ENSMAMG00000001525	cth1	60	58.744	Mastacembelus_armatus
ENSPNYG00000016705	cth1	93	88.060	ENSMZEG00005022335	cth1	91	88.060	Maylandia_zebra
ENSPNYG00000016705	cth1	85	61.255	ENSMMOG00000020518	cth1	96	61.168	Mola_mola
ENSPNYG00000016705	cth1	58	66.667	ENSMALG00000020738	cth1	51	64.737	Monopterus_albus
ENSPNYG00000016705	cth1	88	91.266	ENSNBRG00000022789	cth1	85	91.266	Neolamprologus_brichardi
ENSPNYG00000016705	cth1	93	80.292	ENSONIG00000021318	cth1	91	80.292	Oreochromis_niloticus
ENSPNYG00000016705	cth1	93	57.143	ENSORLG00000022847	cth1	91	57.875	Oryzias_latipes
ENSPNYG00000016705	cth1	93	57.143	ENSORLG00020011979	cth1	91	57.299	Oryzias_latipes_hni
ENSPNYG00000016705	cth1	93	57.143	ENSORLG00015013084	cth1	91	57.875	Oryzias_latipes_hsok
ENSPNYG00000016705	cth1	90	59.615	ENSOMEG00000005809	cth1	77	59.615	Oryzias_melastigma
ENSPNYG00000016705	cth1	94	51.389	ENSPKIG00000015883	cth1	89	50.694	Paramormyrops_kingsleyae
ENSPNYG00000016705	cth1	85	58.545	ENSPMGG00000004275	cth1	92	57.432	Periophthalmus_magnuspinnatus
ENSPNYG00000016705	cth1	91	57.721	ENSPFOG00000013583	cth1	82	59.108	Poecilia_formosa
ENSPNYG00000016705	cth1	92	57.664	ENSPLAG00000018158	cth1	82	59.041	Poecilia_latipinna
ENSPNYG00000016705	cth1	91	57.721	ENSPMEG00000005744	cth1	87	59.108	Poecilia_mexicana
ENSPNYG00000016705	cth1	89	58.621	ENSPREG00000004099	cth1	86	60.076	Poecilia_reticulata
ENSPNYG00000016705	cth1	87	58.333	ENSPNAG00000013147	cth1	86	57.664	Pygocentrus_nattereri
ENSPNYG00000016705	cth1	87	55.431	ENSSFOG00015017190	cth1	62	62.500	Scleropages_formosus
ENSPNYG00000016705	cth1	85	57.407	ENSSMAG00000007977	cth1	91	62.887	Scophthalmus_maximus
ENSPNYG00000016705	cth1	85	59.286	ENSSDUG00000004321	cth1	91	59.732	Seriola_dumerili
ENSPNYG00000016705	cth1	79	62.308	ENSSLDG00000004516	-	91	61.538	Seriola_lalandi_dorsalis
ENSPNYG00000016705	cth1	79	62.308	ENSSLDG00000010023	-	91	61.538	Seriola_lalandi_dorsalis
ENSPNYG00000016705	cth1	79	62.308	ENSSLDG00000012760	cth1	91	61.538	Seriola_lalandi_dorsalis
ENSPNYG00000016705	cth1	85	61.742	ENSSPAG00000018659	cth1	89	62.500	Stegastes_partitus
ENSPNYG00000016705	cth1	92	57.544	ENSTRUG00000012770	cth1	89	60.351	Takifugu_rubripes
ENSPNYG00000016705	cth1	92	58.947	ENSTNIG00000000740	cth1	88	59.431	Tetraodon_nigroviridis
ENSPNYG00000016705	cth1	84	65.297	ENSXCOG00000003710	cth1	82	63.415	Xiphophorus_couchianus
ENSPNYG00000016705	cth1	91	55.197	ENSXMAG00000023885	cth1	89	54.839	Xiphophorus_maculatus