EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000016952 (Gene tree)
Gene ID: -
Gene Symbol: atxn2 (1 of many)
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 10076 bases
Position: chrJH419318.1:1332010-1342085
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000022472	LsmAD	PF06741.13	1.3e-14	1	1
ENSPNYP00000022458	LsmAD	PF06741.13	1.3e-14	1	1
ENSPNYP00000022458	SM-ATX	PF14438.6	1.9e-21	1	1
ENSPNYP00000022472	SM-ATX	PF14438.6	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000023023	-	1861	-	ENSPNYP00000022472	486 (aa)	-	-
ENSPNYT00000023009	-	1876	-	ENSPNYP00000022458	491 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000016952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000016952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000016952	atxn2	91	64.955	ENSG00000204842	ATXN2	90	73.333	Homo_sapiens
ENSPNYG00000016952	atxn2	59	51.815	ENSEBUG00000013060	-	86	52.685	Eptatretus_burgeri
ENSPNYG00000016952	atxn2	71	92.241	ENSLBEG00000017537	atxn2	77	92.241	Labrus_bergylta
ENSPNYG00000016952	atxn2	89	63.242	MGP_CAROLIEiJ_G0027692	Atxn2	50	66.387	Mus_caroli
ENSPNYG00000016952	atxn2	89	63.470	ENSMUSG00000042605	Atxn2	85	70.725	Mus_musculus
ENSPNYG00000016952	atxn2	53	74.231	ENSPSIG00000008144	-	88	74.231	Pelodiscus_sinensis
ENSPNYG00000016952	atxn2	74	60.763	ENSPCIG00000006165	-	50	64.526	Phascolarctos_cinereus