EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000017096 (Gene tree)
Gene ID: 102214574
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 17503 bases
Position: chrJH419496.1:565442-582944
Accession: 102214574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000022707	Upf2	PF04050.14	3.1e-31	1	1
ENSPNYP00000022707	MIF4G	PF02854.19	5.6e-72	1	3
ENSPNYP00000022707	MIF4G	PF02854.19	5.6e-72	2	3
ENSPNYP00000022707	MIF4G	PF02854.19	5.6e-72	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000023267	UPF2-201	3741	XM_005750892	ENSPNYP00000022707	1246 (aa)	XP_005750949	-

Gene Model

Click here to download ENSPNYG00000017096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000017096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000017096	UPF2	100	80.172	ENSG00000151461	UPF2	99	78.454	Homo_sapiens
ENSPNYG00000017096	UPF2	100	88.166	ENSAPOG00000015837	UPF2	100	87.774	Acanthochromis_polyacanthus
ENSPNYG00000017096	UPF2	100	80.703	ENSAMEG00000004586	UPF2	99	78.906	Ailuropoda_melanoleuca
ENSPNYG00000017096	UPF2	100	95.915	ENSACIG00000018078	UPF2	100	95.915	Amphilophus_citrinellus
ENSPNYG00000017096	UPF2	100	94.122	ENSAOCG00000016766	UPF2	99	94.122	Amphiprion_ocellaris
ENSPNYG00000017096	UPF2	100	94.201	ENSAPEG00000019084	UPF2	99	94.201	Amphiprion_percula
ENSPNYG00000017096	UPF2	100	94.201	ENSATEG00000021677	UPF2	99	94.201	Anabas_testudineus
ENSPNYG00000017096	UPF2	100	76.809	ENSAPLG00000010287	UPF2	90	80.726	Anas_platyrhynchos
ENSPNYG00000017096	UPF2	100	80.469	ENSACAG00000009259	UPF2	99	80.547	Anolis_carolinensis
ENSPNYG00000017096	UPF2	91	78.272	ENSANAG00000028451	UPF2	93	78.348	Aotus_nancymaae
ENSPNYG00000017096	UPF2	100	97.251	ENSACLG00000012696	UPF2	99	97.251	Astatotilapia_calliptera
ENSPNYG00000017096	UPF2	100	86.865	ENSAMXG00000013700	UPF2	99	86.787	Astyanax_mexicanus
ENSPNYG00000017096	UPF2	100	80.781	ENSBTAG00000000288	UPF2	99	78.906	Bos_taurus
ENSPNYG00000017096	UPF2	100	79.922	ENSCJAG00000020685	UPF2	99	78.594	Callithrix_jacchus
ENSPNYG00000017096	UPF2	100	80.703	ENSCAFG00000004839	UPF2	99	78.906	Canis_familiaris
ENSPNYG00000017096	UPF2	95	86.735	ENSCAFG00020005882	UPF2	99	87.755	Canis_lupus_dingo
ENSPNYG00000017096	UPF2	100	80.781	ENSCHIG00000020359	UPF2	99	78.906	Capra_hircus
ENSPNYG00000017096	UPF2	100	80.391	ENSTSYG00000000935	UPF2	97	86.932	Carlito_syrichta
ENSPNYG00000017096	UPF2	91	72.432	ENSCAPG00000016658	UPF2	95	72.014	Cavia_aperea
ENSPNYG00000017096	UPF2	99	77.437	ENSCPOG00000008809	UPF2	100	76.730	Cavia_porcellus
ENSPNYG00000017096	UPF2	100	73.832	ENSCCAG00000035991	UPF2	99	72.465	Cebus_capucinus
ENSPNYG00000017096	UPF2	100	80.328	ENSCATG00000032679	UPF2	99	78.610	Cercocebus_atys
ENSPNYG00000017096	UPF2	100	79.437	ENSCLAG00000011434	UPF2	99	78.733	Chinchilla_lanigera
ENSPNYG00000017096	UPF2	100	80.328	ENSCSAG00000013372	UPF2	99	78.610	Chlorocebus_sabaeus
ENSPNYG00000017096	UPF2	78	82.040	ENSCHOG00000000422	UPF2	81	82.040	Choloepus_hoffmanni
ENSPNYG00000017096	UPF2	94	87.006	ENSCPBG00000027823	UPF2	100	79.062	Chrysemys_picta_bellii
ENSPNYG00000017096	UPF2	78	47.685	ENSCSAVG00000007772	-	99	46.673	Ciona_savignyi
ENSPNYG00000017096	UPF2	100	75.213	ENSCANG00000040396	UPF2	100	73.791	Colobus_angolensis_palliatus
ENSPNYG00000017096	UPF2	100	79.984	ENSCGRG00001019347	Upf2	99	78.108	Cricetulus_griseus_chok1gshd
ENSPNYG00000017096	UPF2	100	79.984	ENSCGRG00000017993	Upf2	99	78.108	Cricetulus_griseus_crigri
ENSPNYG00000017096	UPF2	99	83.177	ENSCSEG00000003520	UPF2	99	82.862	Cynoglossus_semilaevis
ENSPNYG00000017096	UPF2	99	91.627	ENSCVAG00000006167	UPF2	100	91.074	Cyprinodon_variegatus
ENSPNYG00000017096	UPF2	100	80.469	ENSDNOG00000018160	UPF2	99	78.594	Dasypus_novemcinctus
ENSPNYG00000017096	UPF2	100	80.312	ENSDORG00000002478	Upf2	99	78.516	Dipodomys_ordii
ENSPNYG00000017096	UPF2	72	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSPNYG00000017096	UPF2	63	73.826	ENSEBUG00000012448	-	93	64.425	Eptatretus_burgeri
ENSPNYG00000017096	UPF2	100	79.750	ENSEASG00005019274	UPF2	99	79.046	Equus_asinus_asinus
ENSPNYG00000017096	UPF2	100	79.750	ENSECAG00000017022	UPF2	99	79.046	Equus_caballus
ENSPNYG00000017096	UPF2	78	89.744	ENSEEUG00000007819	UPF2	69	89.744	Erinaceus_europaeus
ENSPNYG00000017096	UPF2	100	86.339	ENSELUG00000012014	UPF2	99	86.807	Esox_lucius
ENSPNYG00000017096	UPF2	100	85.475	ENSFCAG00000005785	UPF2	92	86.932	Felis_catus
ENSPNYG00000017096	UPF2	100	81.421	ENSFALG00000001889	UPF2	98	79.157	Ficedula_albicollis
ENSPNYG00000017096	UPF2	100	78.968	ENSFDAG00000014348	UPF2	99	78.108	Fukomys_damarensis
ENSPNYG00000017096	UPF2	99	91.785	ENSFHEG00000009826	UPF2	99	91.390	Fundulus_heteroclitus
ENSPNYG00000017096	UPF2	91	87.727	ENSGMOG00000005557	UPF2	100	85.870	Gadus_morhua
ENSPNYG00000017096	UPF2	100	81.889	ENSGALG00000033772	UPF2	99	80.016	Gallus_gallus
ENSPNYG00000017096	UPF2	100	90.909	ENSGAFG00000020867	UPF2	99	90.517	Gambusia_affinis
ENSPNYG00000017096	UPF2	100	90.632	ENSGACG00000001080	UPF2	100	91.179	Gasterosteus_aculeatus
ENSPNYG00000017096	UPF2	100	80.172	ENSGAGG00000002700	UPF2	99	78.393	Gopherus_agassizii
ENSPNYG00000017096	UPF2	100	80.172	ENSGGOG00000001479	UPF2	99	78.454	Gorilla_gorilla
ENSPNYG00000017096	UPF2	100	97.408	ENSHBUG00000004249	UPF2	100	97.408	Haplochromis_burtoni
ENSPNYG00000017096	UPF2	100	79.046	ENSHGLG00000015176	-	99	78.342	Heterocephalus_glaber_female
ENSPNYG00000017096	UPF2	100	71.975	ENSHGLG00000003822	-	99	72.054	Heterocephalus_glaber_female
ENSPNYG00000017096	UPF2	100	76.779	ENSHGLG00100010036	UPF2	100	75.587	Heterocephalus_glaber_male
ENSPNYG00000017096	UPF2	100	88.603	ENSHCOG00000004025	UPF2	99	88.525	Hippocampus_comes
ENSPNYG00000017096	UPF2	100	85.301	ENSIPUG00000015524	UPF2	99	83.255	Ictalurus_punctatus
ENSPNYG00000017096	UPF2	100	80.391	ENSSTOG00000013075	UPF2	99	78.438	Ictidomys_tridecemlineatus
ENSPNYG00000017096	UPF2	100	77.326	ENSJJAG00000004913	Upf2	99	78.186	Jaculus_jaculus
ENSPNYG00000017096	UPF2	99	91.785	ENSKMAG00000001071	UPF2	99	91.785	Kryptolebias_marmoratus
ENSPNYG00000017096	UPF2	100	92.868	ENSLBEG00000016394	-	99	92.868	Labrus_bergylta
ENSPNYG00000017096	UPF2	80	89.422	ENSLBEG00000000728	-	94	89.335	Labrus_bergylta
ENSPNYG00000017096	UPF2	99	74.961	ENSLACG00000015945	UPF2	100	75.195	Latimeria_chalumnae
ENSPNYG00000017096	UPF2	99	86.120	ENSLOCG00000015698	UPF2	99	85.804	Lepisosteus_oculatus
ENSPNYG00000017096	UPF2	100	80.328	ENSMFAG00000043865	UPF2	99	78.610	Macaca_fascicularis
ENSPNYG00000017096	UPF2	100	80.328	ENSMMUG00000008241	UPF2	99	78.610	Macaca_mulatta
ENSPNYG00000017096	UPF2	80	80.507	ENSMNEG00000008062	UPF2	99	78.168	Macaca_nemestrina
ENSPNYG00000017096	UPF2	100	78.315	ENSMLEG00000036120	UPF2	100	76.503	Mandrillus_leucophaeus
ENSPNYG00000017096	UPF2	100	94.122	ENSMAMG00000018276	UPF2	99	94.122	Mastacembelus_armatus
ENSPNYG00000017096	UPF2	100	97.251	ENSMZEG00005021595	UPF2	99	97.251	Maylandia_zebra
ENSPNYG00000017096	UPF2	99	81.490	ENSMGAG00000004573	UPF2	99	79.765	Meleagris_gallopavo
ENSPNYG00000017096	UPF2	100	79.335	ENSMAUG00000016512	Upf2	99	77.435	Mesocricetus_auratus
ENSPNYG00000017096	UPF2	95	86.224	ENSMICG00000001716	UPF2	99	87.245	Microcebus_murinus
ENSPNYG00000017096	UPF2	100	78.951	ENSMOCG00000008263	Upf2	99	78.482	Microtus_ochrogaster
ENSPNYG00000017096	UPF2	100	88.715	ENSMMOG00000006528	UPF2	100	88.245	Mola_mola
ENSPNYG00000017096	UPF2	100	78.672	ENSMODG00000016794	UPF2	99	78.906	Monodelphis_domestica
ENSPNYG00000017096	UPF2	100	92.241	ENSMALG00000002663	UPF2	100	91.536	Monopterus_albus
ENSPNYG00000017096	UPF2	100	79.828	MGP_CAROLIEiJ_G0023157	Upf2	99	83.333	Mus_caroli
ENSPNYG00000017096	UPF2	100	80.141	ENSMUSG00000043241	Upf2	99	83.902	Mus_musculus
ENSPNYG00000017096	UPF2	100	80.219	MGP_PahariEiJ_G0019217	Upf2	99	83.902	Mus_pahari
ENSPNYG00000017096	UPF2	100	80.375	MGP_SPRETEiJ_G0024075	Upf2	99	83.902	Mus_spretus
ENSPNYG00000017096	UPF2	100	80.547	ENSMPUG00000001064	UPF2	99	78.906	Mustela_putorius_furo
ENSPNYG00000017096	UPF2	100	80.031	ENSMLUG00000000228	UPF2	100	78.271	Myotis_lucifugus
ENSPNYG00000017096	UPF2	100	97.408	ENSNBRG00000013629	UPF2	99	97.408	Neolamprologus_brichardi
ENSPNYG00000017096	UPF2	100	80.172	ENSNLEG00000012058	UPF2	99	78.454	Nomascus_leucogenys
ENSPNYG00000017096	UPF2	71	93.662	ENSOPRG00000006801	-	70	93.662	Ochotona_princeps
ENSPNYG00000017096	UPF2	100	79.281	ENSODEG00000001290	UPF2	99	78.421	Octodon_degus
ENSPNYG00000017096	UPF2	100	97.015	ENSONIG00000017991	UPF2	99	97.015	Oreochromis_niloticus
ENSPNYG00000017096	UPF2	100	79.300	ENSOCUG00000006230	UPF2	100	78.444	Oryctolagus_cuniculus
ENSPNYG00000017096	UPF2	100	89.977	ENSORLG00000017189	UPF2	99	90.133	Oryzias_latipes
ENSPNYG00000017096	UPF2	100	90.055	ENSORLG00020005969	UPF2	99	90.211	Oryzias_latipes_hni
ENSPNYG00000017096	UPF2	100	90.055	ENSORLG00015005713	UPF2	99	90.211	Oryzias_latipes_hsok
ENSPNYG00000017096	UPF2	100	86.912	ENSOMEG00000023420	UPF2	98	86.912	Oryzias_melastigma
ENSPNYG00000017096	UPF2	100	80.781	ENSOGAG00000005796	UPF2	99	78.516	Otolemur_garnettii
ENSPNYG00000017096	UPF2	100	80.655	ENSOARG00000014587	UPF2	99	78.783	Ovis_aries
ENSPNYG00000017096	UPF2	100	77.691	ENSPPAG00000037953	UPF2	100	75.878	Pan_paniscus
ENSPNYG00000017096	UPF2	100	80.547	ENSPPRG00000000690	UPF2	99	78.750	Panthera_pardus
ENSPNYG00000017096	UPF2	100	80.547	ENSPTIG00000008867	UPF2	99	78.750	Panthera_tigris_altaica
ENSPNYG00000017096	UPF2	100	80.172	ENSPTRG00000002291	UPF2	99	78.454	Pan_troglodytes
ENSPNYG00000017096	UPF2	100	80.328	ENSPANG00000023399	UPF2	99	78.610	Papio_anubis
ENSPNYG00000017096	UPF2	100	85.927	ENSPKIG00000025502	UPF2	99	84.363	Paramormyrops_kingsleyae
ENSPNYG00000017096	UPF2	58	77.368	ENSPSIG00000015158	UPF2	95	77.237	Pelodiscus_sinensis
ENSPNYG00000017096	UPF2	100	87.618	ENSPMGG00000005259	UPF2	100	87.618	Periophthalmus_magnuspinnatus
ENSPNYG00000017096	UPF2	93	76.945	ENSPEMG00000015731	Upf2	99	69.452	Peromyscus_maniculatus_bairdii
ENSPNYG00000017096	UPF2	100	80.859	ENSPCIG00000006656	UPF2	100	78.984	Phascolarctos_cinereus
ENSPNYG00000017096	UPF2	100	91.301	ENSPFOG00000017118	UPF2	99	90.909	Poecilia_formosa
ENSPNYG00000017096	UPF2	100	91.301	ENSPLAG00000005094	UPF2	99	90.909	Poecilia_latipinna
ENSPNYG00000017096	UPF2	100	91.223	ENSPMEG00000017009	UPF2	99	90.831	Poecilia_mexicana
ENSPNYG00000017096	UPF2	100	89.577	ENSPREG00000021880	UPF2	100	89.577	Poecilia_reticulata
ENSPNYG00000017096	UPF2	65	81.213	ENSPPYG00000002089	-	99	81.451	Pongo_abelii
ENSPNYG00000017096	UPF2	92	94.872	ENSPCAG00000000684	UPF2	95	73.549	Procavia_capensis
ENSPNYG00000017096	UPF2	100	77.812	ENSPCOG00000021656	UPF2	100	76.562	Propithecus_coquereli
ENSPNYG00000017096	UPF2	100	74.083	ENSPVAG00000017286	UPF2	99	72.209	Pteropus_vampyrus
ENSPNYG00000017096	UPF2	100	87.354	ENSPNAG00000009357	UPF2	99	87.276	Pygocentrus_nattereri
ENSPNYG00000017096	UPF2	100	76.342	ENSRNOG00000023593	Upf2	98	94.318	Rattus_norvegicus
ENSPNYG00000017096	UPF2	100	79.141	ENSRBIG00000037780	UPF2	100	77.639	Rhinopithecus_bieti
ENSPNYG00000017096	UPF2	100	80.094	ENSRROG00000043547	UPF2	99	78.298	Rhinopithecus_roxellana
ENSPNYG00000017096	UPF2	100	79.688	ENSSBOG00000020012	UPF2	99	78.281	Saimiri_boliviensis_boliviensis
ENSPNYG00000017096	UPF2	100	84.832	ENSSFOG00015023788	upf2	100	84.404	Scleropages_formosus
ENSPNYG00000017096	UPF2	90	89.341	ENSSMAG00000007637	UPF2	100	89.286	Scophthalmus_maximus
ENSPNYG00000017096	UPF2	100	93.417	ENSSDUG00000017244	UPF2	99	93.417	Seriola_dumerili
ENSPNYG00000017096	UPF2	100	90.439	ENSSLDG00000016866	UPF2	100	90.047	Seriola_lalandi_dorsalis
ENSPNYG00000017096	UPF2	100	79.313	ENSSARG00000008615	UPF2	99	77.674	Sorex_araneus
ENSPNYG00000017096	UPF2	100	78.359	ENSSPUG00000014544	UPF2	99	78.203	Sphenodon_punctatus
ENSPNYG00000017096	UPF2	67	83.333	ENSSSCG00000011117	-	99	83.570	Sus_scrofa
ENSPNYG00000017096	UPF2	99	81.016	ENSTGUG00000002163	-	100	78.906	Taeniopygia_guttata
ENSPNYG00000017096	UPF2	100	91.379	ENSTRUG00000007519	UPF2	99	91.379	Takifugu_rubripes
ENSPNYG00000017096	UPF2	100	87.715	ENSTNIG00000004453	UPF2	99	87.246	Tetraodon_nigroviridis
ENSPNYG00000017096	UPF2	93	72.651	ENSTBEG00000012679	UPF2	93	70.889	Tupaia_belangeri
ENSPNYG00000017096	UPF2	100	79.437	ENSTTRG00000016388	UPF2	99	78.812	Tursiops_truncatus
ENSPNYG00000017096	UPF2	87	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSPNYG00000017096	UPF2	100	80.781	ENSUMAG00000012953	UPF2	95	78.984	Ursus_maritimus
ENSPNYG00000017096	UPF2	82	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSPNYG00000017096	UPF2	100	80.703	ENSVVUG00000006166	UPF2	99	78.906	Vulpes_vulpes
ENSPNYG00000017096	UPF2	100	77.397	ENSXETG00000033103	UPF2	91	81.740	Xenopus_tropicalis
ENSPNYG00000017096	UPF2	100	91.066	ENSXCOG00000011604	UPF2	100	90.674	Xiphophorus_couchianus
ENSPNYG00000017096	UPF2	100	91.223	ENSXMAG00000017209	UPF2	99	90.831	Xiphophorus_maculatus