EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000017153 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 9764 bases
Position: chrJH419768.1:11337-21100
Accession: 102209641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000022835	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSPNYP00000022809	MMR_HSR1	PF01926.23	8.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000023396	-	540	-	ENSPNYP00000022835	179 (aa)	-	-
ENSPNYT00000023370	-	717	-	ENSPNYP00000022809	238 (aa)	-	-
ENSPNYT00000023334	-	660	-	ENSPNYP00000022772	219 (aa)	-	-
ENSPNYT00000023380	-	666	XM_013907860	ENSPNYP00000022819	221 (aa)	XP_013763314	-

Gene Model

Click here to download ENSPNYG00000017153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000017153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000017153	rab34b	84	31.034	ENSPNYG00000002252	rab11a	93	31.034
ENSPNYG00000017153	rab34b	83	38.514	ENSPNYG00000015841	-	78	37.267
ENSPNYG00000017153	rab34b	82	41.333	ENSPNYG00000003511	-	62	41.333
ENSPNYG00000017153	rab34b	84	32.870	ENSPNYG00000008498	-	92	32.870
ENSPNYG00000017153	rab34b	83	38.514	ENSPNYG00000004681	-	79	37.500
ENSPNYG00000017153	rab34b	60	38.318	ENSPNYG00000023810	-	52	38.318
ENSPNYG00000017153	rab34b	73	38.462	ENSPNYG00000012426	rab2a	76	35.152
ENSPNYG00000017153	rab34b	87	36.478	ENSPNYG00000007314	-	94	32.039
ENSPNYG00000017153	rab34b	82	36.301	ENSPNYG00000000512	rab15	77	34.731
ENSPNYG00000017153	rab34b	73	33.333	ENSPNYG00000004098	rab11bb	74	33.333
ENSPNYG00000017153	rab34b	68	36.066	ENSPNYG00000007064	rab18a	74	33.333
ENSPNYG00000017153	rab34b	84	37.086	ENSPNYG00000005326	-	76	35.329
ENSPNYG00000017153	rab34b	82	34.000	ENSPNYG00000018613	si:dkey-13a21.4	93	30.542
ENSPNYG00000017153	rab34b	83	38.255	ENSPNYG00000010861	rab6bb	76	38.710
ENSPNYG00000017153	rab34b	66	43.697	ENSPNYG00000010377	rab1ba	79	36.646
ENSPNYG00000017153	rab34b	82	38.514	ENSPNYG00000019276	-	96	32.524
ENSPNYG00000017153	rab34b	59	31.132	ENSPNYG00000007565	RAP2B	88	33.333
ENSPNYG00000017153	rab34b	83	39.333	ENSPNYG00000013288	rab41	75	40.123
ENSPNYG00000017153	rab34b	82	38.776	ENSPNYG00000007156	rab35b	96	34.500
ENSPNYG00000017153	rab34b	87	37.821	ENSPNYG00000015774	RAB39B	77	37.349
ENSPNYG00000017153	rab34b	82	37.838	ENSPNYG00000009490	si:dkey-16l2.16	95	33.333
ENSPNYG00000017153	rab34b	77	31.690	ENSPNYG00000011135	RAB17	62	31.690
ENSPNYG00000017153	rab34b	70	36.508	ENSPNYG00000018214	rab25b	60	36.508
ENSPNYG00000017153	rab34b	68	41.270	ENSPNYG00000015355	RAB29	62	40.310
ENSPNYG00000017153	rab34b	66	36.975	ENSPNYG00000010615	rab5c	71	33.750
ENSPNYG00000017153	rab34b	83	35.333	ENSPNYG00000023905	rab12	65	34.375
ENSPNYG00000017153	rab34b	82	34.667	ENSPNYG00000005809	-	79	33.333
ENSPNYG00000017153	rab34b	74	35.227	ENSPNYG00000018244	rab11al	79	35.227
ENSPNYG00000017153	rab34b	83	35.333	ENSPNYG00000005654	rab12	65	34.375
ENSPNYG00000017153	rab34b	76	30.601	ENSPNYG00000001751	rab18b	88	30.601
ENSPNYG00000017153	rab34b	83	38.255	ENSPNYG00000019963	rab6ba	92	37.288
ENSPNYG00000017153	rab34b	99	73.034	ENSPNYG00000017514	rab34a	99	61.776
ENSPNYG00000017153	rab34b	76	39.706	ENSPNYG00000019639	rab23	91	36.364
ENSPNYG00000017153	rab34b	66	36.975	ENSPNYG00000015851	-	53	36.975
ENSPNYG00000017153	rab34b	83	33.553	ENSPNYG00000020409	RAB7A	78	33.129
ENSPNYG00000017153	rab34b	82	34.437	ENSPNYG00000000233	rab9b	71	33.750
ENSPNYG00000017153	rab34b	84	31.500	ENSPNYG00000010612	rab5aa	89	31.500
ENSPNYG00000017153	rab34b	82	35.811	ENSPNYG00000010325	rab42a	65	32.948
ENSPNYG00000017153	rab34b	70	44.444	ENSPNYG00000012922	zgc:101559	54	44.444
ENSPNYG00000017153	rab34b	84	32.212	ENSPNYG00000019644	rab11ba	93	32.212
ENSPNYG00000017153	rab34b	69	40.800	ENSPNYG00000000044	rab33a	52	40.800
ENSPNYG00000017153	rab34b	83	39.865	ENSPNYG00000007520	-	75	39.752
ENSPNYG00000017153	rab34b	82	32.667	ENSPNYG00000015328	RAB9A	72	32.075
ENSPNYG00000017153	rab34b	83	39.597	ENSPNYG00000020556	rab6a	76	40.373
ENSPNYG00000017153	rab34b	84	34.483	ENSPNYG00000009172	rab1ab	85	34.483
ENSPNYG00000017153	rab34b	66	39.831	ENSPNYG00000022091	RAB15	55	39.831
ENSPNYG00000017153	rab34b	84	31.884	ENSPNYG00000019611	-	93	31.884
ENSPNYG00000017153	rab34b	66	41.525	ENSPNYG00000009728	rab30	72	36.875
ENSPNYG00000017153	rab34b	69	39.200	ENSPNYG00000010491	rab25a	59	39.200
ENSPNYG00000017153	rab34b	68	36.800	ENSPNYG00000008014	rab32b	57	36.800
ENSPNYG00000017153	rab34b	66	43.333	ENSPNYG00000013054	rab33ba	50	43.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000017153	rab34b	99	92.090	ENSAPOG00000019147	rab34b	96	80.808	Acanthochromis_polyacanthus
ENSPNYG00000017153	rab34b	99	79.661	ENSACIG00000004859	rab34b	100	80.579	Amphilophus_citrinellus
ENSPNYG00000017153	rab34b	99	91.525	ENSAOCG00000007106	rab34b	94	77.821	Amphiprion_ocellaris
ENSPNYG00000017153	rab34b	99	92.090	ENSAPEG00000018607	rab34b	74	88.835	Amphiprion_percula
ENSPNYG00000017153	rab34b	100	91.620	ENSATEG00000006851	rab34b	81	87.923	Anabas_testudineus
ENSPNYG00000017153	rab34b	99	98.870	ENSACLG00000005733	rab34b	100	86.415	Astatotilapia_calliptera
ENSPNYG00000017153	rab34b	99	80.791	ENSAMXG00000006018	rab34b	99	64.706	Astyanax_mexicanus
ENSPNYG00000017153	rab34b	99	85.393	ENSCSEG00000018133	rab34b	96	72.199	Cynoglossus_semilaevis
ENSPNYG00000017153	rab34b	99	79.775	ENSDARG00000010977	rab34b	99	67.984	Danio_rerio
ENSPNYG00000017153	rab34b	99	87.571	ENSELUG00000005597	rab34b	99	73.047	Esox_lucius
ENSPNYG00000017153	rab34b	99	89.831	ENSFHEG00000004532	rab34b	100	74.803	Fundulus_heteroclitus
ENSPNYG00000017153	rab34b	85	88.889	ENSGMOG00000007140	rab34b	100	82.524	Gadus_morhua
ENSPNYG00000017153	rab34b	99	92.090	ENSGACG00000020514	rab34b	99	78.125	Gasterosteus_aculeatus
ENSPNYG00000017153	rab34b	99	78.531	ENSIPUG00000024531	rab34	99	65.748	Ictalurus_punctatus
ENSPNYG00000017153	rab34b	99	90.395	ENSKMAG00000019341	rab34b	100	77.381	Kryptolebias_marmoratus
ENSPNYG00000017153	rab34b	97	93.103	ENSLBEG00000027819	rab34b	87	93.103	Labrus_bergylta
ENSPNYG00000017153	rab34b	99	90.960	ENSMAMG00000020214	rab34b	100	77.778	Mastacembelus_armatus
ENSPNYG00000017153	rab34b	99	88.764	ENSMMOG00000010936	rab34b	89	73.745	Mola_mola
ENSPNYG00000017153	rab34b	100	87.151	ENSMALG00000018499	rab34b	89	78.571	Monopterus_albus
ENSPNYG00000017153	rab34b	99	98.305	ENSONIG00000005519	rab34b	100	86.220	Oreochromis_niloticus
ENSPNYG00000017153	rab34b	99	90.960	ENSORLG00000003119	rab34b	96	75.573	Oryzias_latipes
ENSPNYG00000017153	rab34b	99	91.525	ENSORLG00020016139	rab34b	96	76.336	Oryzias_latipes_hni
ENSPNYG00000017153	rab34b	99	90.960	ENSORLG00015000584	rab34b	96	75.954	Oryzias_latipes_hsok
ENSPNYG00000017153	rab34b	99	92.090	ENSOMEG00000010334	rab34b	84	87.864	Oryzias_melastigma
ENSPNYG00000017153	rab34b	99	74.011	ENSPKIG00000013326	rab34b	99	64.202	Paramormyrops_kingsleyae
ENSPNYG00000017153	rab34b	99	87.571	ENSPMGG00000021697	rab34b	100	75.391	Periophthalmus_magnuspinnatus
ENSPNYG00000017153	rab34b	99	89.831	ENSPFOG00000011444	rab34b	100	76.863	Poecilia_formosa
ENSPNYG00000017153	rab34b	99	89.831	ENSPLAG00000005074	rab34b	100	76.772	Poecilia_latipinna
ENSPNYG00000017153	rab34b	99	89.831	ENSPMEG00000013297	rab34b	100	76.772	Poecilia_mexicana
ENSPNYG00000017153	rab34b	99	89.266	ENSPREG00000009813	rab34b	100	75.984	Poecilia_reticulata
ENSPNYG00000017153	rab34b	99	80.791	ENSPNAG00000015040	rab34b	88	74.286	Pygocentrus_nattereri
ENSPNYG00000017153	rab34b	99	77.966	ENSSFOG00015005188	rab34	99	63.953	Scleropages_formosus
ENSPNYG00000017153	rab34b	99	89.831	ENSSMAG00000019926	rab34b	89	88.462	Scophthalmus_maximus
ENSPNYG00000017153	rab34b	99	94.350	ENSSDUG00000016760	rab34b	80	80.469	Seriola_dumerili
ENSPNYG00000017153	rab34b	100	93.855	ENSSLDG00000014812	rab34b	87	93.855	Seriola_lalandi_dorsalis
ENSPNYG00000017153	rab34b	99	89.831	ENSSPAG00000002801	rab34b	100	76.378	Stegastes_partitus
ENSPNYG00000017153	rab34b	99	86.441	ENSTRUG00000014481	rab34b	98	74.274	Takifugu_rubripes
ENSPNYG00000017153	rab34b	99	88.701	ENSTNIG00000016158	rab34b	99	76.172	Tetraodon_nigroviridis