EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000017888 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 64679 bases
Position: chrJH419303.1:524501-589179
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000023688	zf-C2H2	PF00096.26	1e-19	1	4
ENSPNYP00000023688	zf-C2H2	PF00096.26	1e-19	2	4
ENSPNYP00000023688	zf-C2H2	PF00096.26	1e-19	3	4
ENSPNYP00000023688	zf-C2H2	PF00096.26	1e-19	4	4
ENSPNYP00000023674	zf-C2H2	PF00096.26	7.2e-14	1	2
ENSPNYP00000023674	zf-C2H2	PF00096.26	7.2e-14	2	2
ENSPNYP00000023688	zf-met	PF12874.7	2e-10	1	2
ENSPNYP00000023688	zf-met	PF12874.7	2e-10	2	2
ENSPNYP00000023674	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024256	-	813	-	ENSPNYP00000023674	270 (aa)	-	-
ENSPNYT00000024271	-	1314	-	ENSPNYP00000023688	437 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000017888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000017888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000017888	-	66	46.729	ENSPNYG00000005777	-	83	46.729
ENSPNYG00000017888	-	60	43.529	ENSPNYG00000000713	-	55	47.222
ENSPNYG00000017888	-	67	48.936	ENSPNYG00000007814	-	92	48.936
ENSPNYG00000017888	-	53	42.056	ENSPNYG00000009360	-	67	44.275
ENSPNYG00000017888	-	59	51.923	ENSPNYG00000018372	-	61	40.884
ENSPNYG00000017888	-	55	46.094	ENSPNYG00000011973	-	86	46.094
ENSPNYG00000017888	-	55	45.946	ENSPNYG00000023882	-	84	38.411
ENSPNYG00000017888	-	65	47.000	ENSPNYG00000023764	-	72	47.000
ENSPNYG00000017888	-	65	42.268	ENSPNYG00000019241	-	93	42.268
ENSPNYG00000017888	-	73	45.312	ENSPNYG00000020245	-	72	47.656
ENSPNYG00000017888	-	53	48.462	ENSPNYG00000007597	-	86	47.656
ENSPNYG00000017888	-	57	32.710	ENSPNYG00000012572	zbtb17	52	36.893
ENSPNYG00000017888	-	89	41.176	ENSPNYG00000018422	gfi1b	82	41.176
ENSPNYG00000017888	-	81	39.370	ENSPNYG00000015514	zbtb16b	58	39.370
ENSPNYG00000017888	-	74	49.398	ENSPNYG00000005202	-	97	51.899
ENSPNYG00000017888	-	88	37.168	ENSPNYG00000015217	snai2	92	37.168
ENSPNYG00000017888	-	50	43.902	ENSPNYG00000022271	znf319b	93	35.519
ENSPNYG00000017888	-	51	42.857	ENSPNYG00000015106	znf341	59	51.020
ENSPNYG00000017888	-	56	50.909	ENSPNYG00000024244	-	85	42.056
ENSPNYG00000017888	-	80	50.000	ENSPNYG00000011024	-	80	50.000
ENSPNYG00000017888	-	58	44.860	ENSPNYG00000007756	-	74	44.860
ENSPNYG00000017888	-	63	50.476	ENSPNYG00000011987	-	76	50.476
ENSPNYG00000017888	-	53	38.636	ENSPNYG00000021795	-	60	38.636
ENSPNYG00000017888	-	88	52.336	ENSPNYG00000002684	-	99	52.336
ENSPNYG00000017888	-	74	40.187	ENSPNYG00000000726	-	86	37.870
ENSPNYG00000017888	-	73	43.777	ENSPNYG00000018920	-	83	55.238
ENSPNYG00000017888	-	54	50.467	ENSPNYG00000023088	-	84	43.038
ENSPNYG00000017888	-	53	40.678	ENSPNYG00000024192	-	65	49.462
ENSPNYG00000017888	-	64	37.391	ENSPNYG00000022279	PRDM15	50	31.844
ENSPNYG00000017888	-	56	49.533	ENSPNYG00000008731	-	90	48.544
ENSPNYG00000017888	-	50	42.857	ENSPNYG00000007972	-	81	51.250
ENSPNYG00000017888	-	58	47.573	ENSPNYG00000012188	-	84	47.573
ENSPNYG00000017888	-	50	42.667	ENSPNYG00000022227	-	52	43.750
ENSPNYG00000017888	-	56	47.619	ENSPNYG00000007781	-	94	47.619
ENSPNYG00000017888	-	70	38.806	ENSPNYG00000018616	-	79	44.595
ENSPNYG00000017888	-	59	45.872	ENSPNYG00000010637	-	80	45.872
ENSPNYG00000017888	-	61	45.192	ENSPNYG00000009700	-	79	37.778
ENSPNYG00000017888	-	77	41.860	ENSPNYG00000012877	znf236	68	44.954
ENSPNYG00000017888	-	51	39.189	ENSPNYG00000019343	-	81	44.000
ENSPNYG00000017888	-	62	38.333	ENSPNYG00000017692	znf646	72	38.333
ENSPNYG00000017888	-	76	41.333	ENSPNYG00000023637	-	72	41.333
ENSPNYG00000017888	-	50	50.467	ENSPNYG00000021671	-	84	50.467
ENSPNYG00000017888	-	51	43.697	ENSPNYG00000003762	-	84	43.697
ENSPNYG00000017888	-	84	43.878	ENSPNYG00000016563	-	95	43.878
ENSPNYG00000017888	-	50	40.854	ENSPNYG00000004923	-	66	48.113
ENSPNYG00000017888	-	55	46.377	ENSPNYG00000005671	-	73	46.377
ENSPNYG00000017888	-	80	38.272	ENSPNYG00000016610	-	84	38.272
ENSPNYG00000017888	-	53	47.368	ENSPNYG00000019187	-	83	36.607
ENSPNYG00000017888	-	54	56.757	ENSPNYG00000019549	-	92	56.757
ENSPNYG00000017888	-	70	42.857	ENSPNYG00000017733	scrt1b	80	42.857
ENSPNYG00000017888	-	50	39.726	ENSPNYG00000019219	-	89	33.480
ENSPNYG00000017888	-	55	37.273	ENSPNYG00000020716	-	91	37.273
ENSPNYG00000017888	-	51	47.664	ENSPNYG00000019503	-	91	47.664
ENSPNYG00000017888	-	57	45.255	ENSPNYG00000020699	-	90	45.255
ENSPNYG00000017888	-	84	46.617	ENSPNYG00000003392	-	97	45.631
ENSPNYG00000017888	-	71	41.361	ENSPNYG00000017980	-	72	49.412
ENSPNYG00000017888	-	66	39.474	ENSPNYG00000005945	-	68	48.544
ENSPNYG00000017888	-	66	42.222	ENSPNYG00000005296	-	90	39.759
ENSPNYG00000017888	-	56	49.593	ENSPNYG00000019368	-	90	37.097
ENSPNYG00000017888	-	52	43.529	ENSPNYG00000007552	-	87	48.819
ENSPNYG00000017888	-	53	47.619	ENSPNYG00000002862	-	50	47.619
ENSPNYG00000017888	-	55	55.340	ENSPNYG00000003684	-	96	57.143
ENSPNYG00000017888	-	94	48.246	ENSPNYG00000019396	-	94	48.246
ENSPNYG00000017888	-	63	44.578	ENSPNYG00000012194	prdm5	73	44.578
ENSPNYG00000017888	-	54	50.549	ENSPNYG00000022330	-	79	50.549
ENSPNYG00000017888	-	91	45.669	ENSPNYG00000022104	-	91	45.669
ENSPNYG00000017888	-	66	40.201	ENSPNYG00000017141	-	95	36.759
ENSPNYG00000017888	-	67	43.902	ENSPNYG00000001524	ZNF319	87	36.612
ENSPNYG00000017888	-	51	39.474	ENSPNYG00000019325	-	60	48.598
ENSPNYG00000017888	-	50	41.989	ENSPNYG00000021217	-	72	51.402
ENSPNYG00000017888	-	50	47.126	ENSPNYG00000002699	-	94	44.231
ENSPNYG00000017888	-	50	40.437	ENSPNYG00000018360	-	76	49.524
ENSPNYG00000017888	-	53	49.533	ENSPNYG00000002873	-	66	49.533
ENSPNYG00000017888	-	65	44.828	ENSPNYG00000018779	-	89	50.000
ENSPNYG00000017888	-	83	41.085	ENSPNYG00000020737	-	86	41.085
ENSPNYG00000017888	-	70	43.411	ENSPNYG00000023916	-	74	43.411
ENSPNYG00000017888	-	69	44.809	ENSPNYG00000019565	-	94	51.485
ENSPNYG00000017888	-	53	41.026	ENSPNYG00000015486	-	58	41.026
ENSPNYG00000017888	-	94	41.509	ENSPNYG00000015803	-	91	49.593
ENSPNYG00000017888	-	73	35.644	ENSPNYG00000010647	-	90	47.222
ENSPNYG00000017888	-	84	42.202	ENSPNYG00000024243	-	92	42.202
ENSPNYG00000017888	-	50	52.475	ENSPNYG00000018597	-	81	52.475
ENSPNYG00000017888	-	76	42.991	ENSPNYG00000021571	-	83	42.991
ENSPNYG00000017888	-	51	38.462	ENSPNYG00000015933	-	84	44.565
ENSPNYG00000017888	-	56	43.519	ENSPNYG00000022345	znf526	51	43.519
ENSPNYG00000017888	-	83	42.991	ENSPNYG00000003834	-	94	39.881
ENSPNYG00000017888	-	53	42.683	ENSPNYG00000008664	-	93	40.437
ENSPNYG00000017888	-	64	35.032	ENSPNYG00000024183	zgc:173577	96	34.884
ENSPNYG00000017888	-	50	38.889	ENSPNYG00000019820	-	64	48.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000017888	-	56	47.664	ENSAPOG00000008319	-	52	40.000	Acanthochromis_polyacanthus
ENSPNYG00000017888	-	97	50.000	ENSAPOG00000019138	-	77	50.000	Acanthochromis_polyacanthus
ENSPNYG00000017888	-	67	40.187	ENSACIG00000006826	-	61	45.455	Amphilophus_citrinellus
ENSPNYG00000017888	-	59	38.286	ENSACIG00000007464	-	52	38.286	Amphilophus_citrinellus
ENSPNYG00000017888	-	51	49.515	ENSACIG00000004641	-	52	49.515	Amphilophus_citrinellus
ENSPNYG00000017888	-	53	43.617	ENSACIG00000017892	-	78	40.777	Amphilophus_citrinellus
ENSPNYG00000017888	-	67	37.640	ENSAOCG00000015944	-	52	48.598	Amphiprion_ocellaris
ENSPNYG00000017888	-	55	48.598	ENSAOCG00000014769	-	58	48.598	Amphiprion_ocellaris
ENSPNYG00000017888	-	94	48.544	ENSAOCG00000016897	-	82	48.544	Amphiprion_ocellaris
ENSPNYG00000017888	-	50	34.940	ENSAOCG00000001325	-	68	40.541	Amphiprion_ocellaris
ENSPNYG00000017888	-	94	47.573	ENSAPEG00000001556	-	82	47.573	Amphiprion_percula
ENSPNYG00000017888	-	53	42.520	ENSAPEG00000010013	-	63	42.520	Amphiprion_percula
ENSPNYG00000017888	-	81	46.774	ENSAPEG00000018762	-	58	46.774	Amphiprion_percula
ENSPNYG00000017888	-	86	34.426	ENSATEG00000018931	-	88	40.212	Anabas_testudineus
ENSPNYG00000017888	-	50	48.193	ENSACLG00000011658	-	73	47.826	Astatotilapia_calliptera
ENSPNYG00000017888	-	55	44.444	ENSAMXG00000029518	-	62	44.444	Astyanax_mexicanus
ENSPNYG00000017888	-	50	38.053	ENSCING00000002128	zf(c2h2)-35	62	39.252	Ciona_intestinalis
ENSPNYG00000017888	-	52	37.500	ENSCSEG00000010453	-	54	45.794	Cynoglossus_semilaevis
ENSPNYG00000017888	-	51	43.878	ENSCSEG00000010264	-	79	43.158	Cynoglossus_semilaevis
ENSPNYG00000017888	-	61	50.467	ENSCSEG00000008528	-	59	50.467	Cynoglossus_semilaevis
ENSPNYG00000017888	-	53	46.729	ENSCVAG00000006653	-	57	46.729	Cyprinodon_variegatus
ENSPNYG00000017888	-	50	47.273	ENSCVAG00000015616	-	73	47.273	Cyprinodon_variegatus
ENSPNYG00000017888	-	53	48.276	ENSCVAG00000003250	-	63	48.276	Cyprinodon_variegatus
ENSPNYG00000017888	-	62	34.500	ENSEBUG00000011449	-	98	36.364	Eptatretus_burgeri
ENSPNYG00000017888	-	53	42.991	ENSEBUG00000002290	-	53	40.331	Eptatretus_burgeri
ENSPNYG00000017888	-	53	42.056	ENSEBUG00000007931	-	66	42.056	Eptatretus_burgeri
ENSPNYG00000017888	-	66	54.082	ENSELUG00000024007	-	75	50.000	Esox_lucius
ENSPNYG00000017888	-	52	42.697	ENSELUG00000001909	-	78	42.056	Esox_lucius
ENSPNYG00000017888	-	50	38.415	ENSGAFG00000001879	-	55	47.619	Gambusia_affinis
ENSPNYG00000017888	-	73	33.571	ENSGAFG00000011998	-	65	45.783	Gambusia_affinis
ENSPNYG00000017888	-	51	41.803	ENSHBUG00000006656	-	60	41.803	Haplochromis_burtoni
ENSPNYG00000017888	-	82	42.520	ENSHCOG00000008550	-	86	42.520	Hippocampus_comes
ENSPNYG00000017888	-	57	46.226	ENSHCOG00000015497	-	77	46.226	Hippocampus_comes
ENSPNYG00000017888	-	63	37.975	ENSHCOG00000008227	-	54	37.755	Hippocampus_comes
ENSPNYG00000017888	-	67	45.455	ENSHCOG00000013489	-	88	48.529	Hippocampus_comes
ENSPNYG00000017888	-	82	42.520	ENSHCOG00000001873	-	86	42.520	Hippocampus_comes
ENSPNYG00000017888	-	75	46.847	ENSLBEG00000011210	-	71	46.847	Labrus_bergylta
ENSPNYG00000017888	-	50	37.975	ENSLBEG00000007106	-	59	42.241	Labrus_bergylta
ENSPNYG00000017888	-	73	38.071	ENSLBEG00000001132	-	79	38.071	Labrus_bergylta
ENSPNYG00000017888	-	54	39.048	ENSLBEG00000017424	-	97	39.048	Labrus_bergylta
ENSPNYG00000017888	-	59	41.259	ENSLBEG00000006161	-	73	43.382	Labrus_bergylta
ENSPNYG00000017888	-	57	46.154	ENSLOCG00000004208	-	99	46.154	Lepisosteus_oculatus
ENSPNYG00000017888	-	78	44.444	ENSMAMG00000017939	-	77	44.444	Mastacembelus_armatus
ENSPNYG00000017888	-	64	40.157	ENSMALG00000004279	-	79	40.157	Monopterus_albus
ENSPNYG00000017888	-	59	48.598	ENSONIG00000007967	-	54	48.598	Oreochromis_niloticus
ENSPNYG00000017888	-	53	36.090	ENSONIG00000005050	-	86	33.333	Oreochromis_niloticus
ENSPNYG00000017888	-	53	41.912	ENSORLG00000021885	-	67	48.148	Oryzias_latipes
ENSPNYG00000017888	-	73	36.098	ENSORLG00000002268	-	94	35.870	Oryzias_latipes
ENSPNYG00000017888	-	53	41.228	ENSORLG00020018921	-	66	41.228	Oryzias_latipes_hni
ENSPNYG00000017888	-	52	40.120	ENSORLG00015018099	-	63	45.977	Oryzias_latipes_hsok
ENSPNYG00000017888	-	68	34.555	ENSOMEG00000005578	-	77	34.555	Oryzias_melastigma
ENSPNYG00000017888	-	56	45.349	ENSPMGG00000006928	-	51	45.349	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	53	47.619	ENSPMGG00000002659	-	64	51.136	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	78	47.059	ENSPMGG00000009571	-	77	47.059	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	50	35.928	ENSPMGG00000019750	-	82	39.706	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	54	46.875	ENSPMGG00000002455	-	92	43.220	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	54	45.745	ENSPMGG00000007051	-	55	45.000	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	53	48.077	ENSPMGG00000002661	-	67	46.875	Periophthalmus_magnuspinnatus
ENSPNYG00000017888	-	65	36.747	ENSPMAG00000004189	-	95	42.593	Petromyzon_marinus
ENSPNYG00000017888	-	50	32.258	ENSPMAG00000002022	-	100	40.187	Petromyzon_marinus
ENSPNYG00000017888	-	96	48.276	ENSPFOG00000018860	-	100	48.276	Poecilia_formosa
ENSPNYG00000017888	-	53	45.133	ENSPFOG00000009491	-	52	45.133	Poecilia_formosa
ENSPNYG00000017888	-	56	37.615	ENSPLAG00000014832	-	74	37.615	Poecilia_latipinna
ENSPNYG00000017888	-	51	36.937	ENSPLAG00000008941	-	69	48.276	Poecilia_latipinna
ENSPNYG00000017888	-	52	42.500	ENSPLAG00000010067	-	63	46.729	Poecilia_latipinna
ENSPNYG00000017888	-	67	42.609	ENSPMEG00000002953	-	74	42.609	Poecilia_mexicana
ENSPNYG00000017888	-	56	37.615	ENSPMEG00000005210	-	74	37.615	Poecilia_mexicana
ENSPNYG00000017888	-	53	45.133	ENSPMEG00000024117	-	52	45.133	Poecilia_mexicana
ENSPNYG00000017888	-	83	38.835	ENSPREG00000002603	-	97	38.835	Poecilia_reticulata
ENSPNYG00000017888	-	70	35.052	ENSPNAG00000005946	-	86	43.925	Pygocentrus_nattereri
ENSPNYG00000017888	-	79	42.241	ENSSFOG00015011531	-	93	38.614	Scleropages_formosus
ENSPNYG00000017888	-	63	46.296	ENSSMAG00000013291	-	92	50.000	Scophthalmus_maximus
ENSPNYG00000017888	-	59	46.154	ENSSMAG00000008308	-	58	40.645	Scophthalmus_maximus
ENSPNYG00000017888	-	57	48.598	ENSSLDG00000011849	-	55	40.645	Seriola_lalandi_dorsalis
ENSPNYG00000017888	-	50	36.076	ENSSPAG00000011544	-	53	40.602	Stegastes_partitus
ENSPNYG00000017888	-	60	43.396	ENSSPAG00000011533	-	89	43.396	Stegastes_partitus
ENSPNYG00000017888	-	56	42.308	ENSXETG00000012506	znf91	99	42.308	Xenopus_tropicalis
ENSPNYG00000017888	-	50	51.163	ENSXCOG00000000254	-	58	51.163	Xiphophorus_couchianus
ENSPNYG00000017888	-	54	40.909	ENSXCOG00000003441	-	58	40.909	Xiphophorus_couchianus
ENSPNYG00000017888	-	51	47.664	ENSXCOG00000020768	-	66	48.246	Xiphophorus_couchianus
ENSPNYG00000017888	-	60	37.615	ENSXMAG00000012936	-	90	34.426	Xiphophorus_maculatus