EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000017929 (Gene tree)
Gene ID: 102206287
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 24946 bases
Position: chrJH419264.1:2597605-2622550
Accession: 102206287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000023818	Ribonuc_2-5A	PF06479.12	3.2e-40	1	1
ENSPNYP00000023798	Ribonuc_2-5A	PF06479.12	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024381	-	6024	XM_005734639	ENSPNYP00000023798	1088 (aa)	XP_005734696	UPI0003AF7E49
ENSPNYT00000024401	-	3099	-	ENSPNYP00000023818	1032 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000017929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000017929's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000017929	ern1	90	55.821	ENSPNYG00000014961	ern2	98	54.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000017929	ern1	99	93.053	ENSAPOG00000009999	ern1	99	90.691	Acanthochromis_polyacanthus
ENSPNYG00000017929	ern1	100	94.669	ENSACIG00000021716	ern1	100	94.669	Amphilophus_citrinellus
ENSPNYG00000017929	ern1	99	93.444	ENSAOCG00000012309	ern1	99	91.336	Amphiprion_ocellaris
ENSPNYG00000017929	ern1	99	92.955	ENSAPEG00000011263	ern1	98	94.811	Amphiprion_percula
ENSPNYG00000017929	ern1	99	91.879	ENSATEG00000024468	ern1	100	89.061	Anabas_testudineus
ENSPNYG00000017929	ern1	100	99.449	ENSACLG00000027919	ern1	100	99.449	Astatotilapia_calliptera
ENSPNYG00000017929	ern1	97	82.687	ENSAMXG00000000944	ern1	96	82.687	Astyanax_mexicanus
ENSPNYG00000017929	ern1	99	89.073	ENSCSEG00000014500	ern1	99	89.366	Cynoglossus_semilaevis
ENSPNYG00000017929	ern1	98	88.922	ENSCVAG00000002988	ern1	99	87.103	Cyprinodon_variegatus
ENSPNYG00000017929	ern1	94	82.154	ENSDARG00000013997	ern1	100	82.420	Danio_rerio
ENSPNYG00000017929	ern1	93	82.533	ENSELUG00000005957	ern1	93	82.533	Esox_lucius
ENSPNYG00000017929	ern1	98	88.560	ENSFHEG00000005578	ern1	97	87.488	Fundulus_heteroclitus
ENSPNYG00000017929	ern1	91	87.872	ENSGMOG00000011232	ern1	100	87.872	Gadus_morhua
ENSPNYG00000017929	ern1	99	89.510	ENSGAFG00000020231	ern1	99	86.679	Gambusia_affinis
ENSPNYG00000017929	ern1	92	90.795	ENSGACG00000011700	ern1	99	90.795	Gasterosteus_aculeatus
ENSPNYG00000017929	ern1	99	98.700	ENSHBUG00000012581	ern1	99	99.223	Haplochromis_burtoni
ENSPNYG00000017929	ern1	98	87.735	ENSHCOG00000016199	ern1	99	84.476	Hippocampus_comes
ENSPNYG00000017929	ern1	94	83.930	ENSIPUG00000011083	ern1	93	83.930	Ictalurus_punctatus
ENSPNYG00000017929	ern1	98	89.219	ENSKMAG00000019499	ern1	100	86.239	Kryptolebias_marmoratus
ENSPNYG00000017929	ern1	96	89.627	ENSLBEG00000025907	ern1	100	86.059	Labrus_bergylta
ENSPNYG00000017929	ern1	99	91.462	ENSMAMG00000023439	ern1	100	88.574	Mastacembelus_armatus
ENSPNYG00000017929	ern1	100	99.449	ENSMZEG00005003221	ern1	100	99.449	Maylandia_zebra
ENSPNYG00000017929	ern1	94	91.385	ENSMMOG00000007650	ern1	97	91.385	Mola_mola
ENSPNYG00000017929	ern1	99	89.729	ENSMALG00000017775	ern1	98	86.667	Monopterus_albus
ENSPNYG00000017929	ern1	99	97.214	ENSNBRG00000002179	ern1	99	97.214	Neolamprologus_brichardi
ENSPNYG00000017929	ern1	91	97.246	ENSONIG00000017169	ern1	98	97.246	Oreochromis_niloticus
ENSPNYG00000017929	ern1	98	89.020	ENSORLG00000008940	ern1	99	86.300	Oryzias_latipes
ENSPNYG00000017929	ern1	98	89.216	ENSORLG00020018387	ern1	99	86.309	Oryzias_latipes_hni
ENSPNYG00000017929	ern1	98	89.020	ENSORLG00015007946	ern1	99	86.216	Oryzias_latipes_hsok
ENSPNYG00000017929	ern1	99	88.361	ENSOMEG00000011741	ern1	99	86.216	Oryzias_melastigma
ENSPNYG00000017929	ern1	94	81.837	ENSPKIG00000005593	ern1	99	81.837	Paramormyrops_kingsleyae
ENSPNYG00000017929	ern1	98	88.420	ENSPMGG00000020442	ern1	98	87.819	Periophthalmus_magnuspinnatus
ENSPNYG00000017929	ern1	98	90.575	ENSPFOG00000007378	ern1	97	88.506	Poecilia_formosa
ENSPNYG00000017929	ern1	98	90.575	ENSPLAG00000014780	ern1	97	88.506	Poecilia_latipinna
ENSPNYG00000017929	ern1	98	90.675	ENSPMEG00000016324	ern1	97	88.506	Poecilia_mexicana
ENSPNYG00000017929	ern1	98	90.079	ENSPREG00000006286	ern1	97	88.027	Poecilia_reticulata
ENSPNYG00000017929	ern1	97	82.213	ENSPNAG00000029447	ern1	97	82.411	Pygocentrus_nattereri
ENSPNYG00000017929	ern1	99	90.802	ENSSMAG00000015042	ern1	100	87.694	Scophthalmus_maximus
ENSPNYG00000017929	ern1	99	93.683	ENSSDUG00000009098	ern1	100	90.967	Seriola_dumerili
ENSPNYG00000017929	ern1	99	93.294	ENSSLDG00000023254	ern1	100	90.511	Seriola_lalandi_dorsalis
ENSPNYG00000017929	ern1	99	92.473	ENSSPAG00000017539	ern1	99	90.198	Stegastes_partitus
ENSPNYG00000017929	ern1	95	89.796	ENSTRUG00000001041	ern1	97	88.276	Takifugu_rubripes
ENSPNYG00000017929	ern1	91	92.217	ENSTNIG00000017990	ern1	99	91.396	Tetraodon_nigroviridis
ENSPNYG00000017929	ern1	95	91.141	ENSXCOG00000010330	ern1	97	91.141	Xiphophorus_couchianus
ENSPNYG00000017929	ern1	98	90.278	ENSXMAG00000001310	ern1	96	88.547	Xiphophorus_maculatus