EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000018125 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 2544 bases
Position: chrJH419289.1:2463849-2466392
Accession: 102196933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024016	RRM_1	PF00076.22	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024608	-	1182	XM_005738568	ENSPNYP00000024016	393 (aa)	XP_005738625	-

Gene Model

Click here to download ENSPNYG00000018125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018125	zgc:153215	97	51.247	ENSAPOG00000008836	zgc:153215	97	51.247	Acanthochromis_polyacanthus
ENSPNYG00000018125	zgc:153215	99	31.235	ENSACIG00000014943	rbm12b	97	31.935	Amphilophus_citrinellus
ENSPNYG00000018125	zgc:153215	96	81.395	ENSACIG00000013317	zgc:153215	86	81.395	Amphilophus_citrinellus
ENSPNYG00000018125	zgc:153215	93	75.000	ENSAOCG00000010819	zgc:153215	99	50.605	Amphiprion_ocellaris
ENSPNYG00000018125	zgc:153215	59	31.250	ENSAPEG00000022079	rbm12b	99	31.250	Amphiprion_percula
ENSPNYG00000018125	zgc:153215	94	78.049	ENSATEG00000001886	zgc:153215	79	74.194	Anabas_testudineus
ENSPNYG00000018125	zgc:153215	97	97.872	ENSACLG00000007675	zgc:153215	85	97.872	Astatotilapia_calliptera
ENSPNYG00000018125	zgc:153215	97	52.747	ENSAMXG00000020853	zgc:153215	71	52.747	Astyanax_mexicanus
ENSPNYG00000018125	zgc:153215	70	50.581	ENSCSEG00000001575	-	99	50.581	Cynoglossus_semilaevis
ENSPNYG00000018125	zgc:153215	97	46.667	ENSCVAG00000009259	-	100	46.667	Cyprinodon_variegatus
ENSPNYG00000018125	zgc:153215	96	54.737	ENSDARG00000055889	zgc:153215	87	54.737	Danio_rerio
ENSPNYG00000018125	zgc:153215	96	61.250	ENSELUG00000009039	zgc:153215	71	59.341	Esox_lucius
ENSPNYG00000018125	zgc:153215	96	43.182	ENSFALG00000014893	RBM12B	61	43.182	Ficedula_albicollis
ENSPNYG00000018125	zgc:153215	95	55.164	ENSFHEG00000014539	zgc:153215	96	55.164	Fundulus_heteroclitus
ENSPNYG00000018125	zgc:153215	97	30.303	ENSGMOG00000013467	rbm12b	74	30.303	Gadus_morhua
ENSPNYG00000018125	zgc:153215	95	58.586	ENSGAFG00000007845	zgc:153215	91	58.586	Gambusia_affinis
ENSPNYG00000018125	zgc:153215	99	43.182	ENSGAGG00000009774	RBM12B	64	43.182	Gopherus_agassizii
ENSPNYG00000018125	zgc:153215	97	97.872	ENSHBUG00000016150	zgc:153215	81	97.872	Haplochromis_burtoni
ENSPNYG00000018125	zgc:153215	97	48.454	ENSIPUG00000019731	zgc:153215	84	48.454	Ictalurus_punctatus
ENSPNYG00000018125	zgc:153215	97	55.125	ENSKMAG00000004958	zgc:153215	99	55.125	Kryptolebias_marmoratus
ENSPNYG00000018125	zgc:153215	97	52.500	ENSLBEG00000002597	zgc:153215	99	52.708	Labrus_bergylta
ENSPNYG00000018125	zgc:153215	97	73.404	ENSMAMG00000012038	zgc:153215	82	73.404	Mastacembelus_armatus
ENSPNYG00000018125	zgc:153215	97	97.872	ENSMZEG00005005435	zgc:153215	81	97.872	Maylandia_zebra
ENSPNYG00000018125	zgc:153215	97	30.751	ENSMMOG00000002404	rbm12b	69	30.751	Mola_mola
ENSPNYG00000018125	zgc:153215	97	44.554	ENSMMOG00000003372	zgc:153215	99	45.885	Mola_mola
ENSPNYG00000018125	zgc:153215	98	53.145	ENSMALG00000001222	zgc:153215	99	53.145	Monopterus_albus
ENSPNYG00000018125	zgc:153215	97	95.745	ENSNBRG00000013644	zgc:153215	81	95.745	Neolamprologus_brichardi
ENSPNYG00000018125	zgc:153215	96	80.672	ENSONIG00000006054	zgc:153215	99	73.563	Oreochromis_niloticus
ENSPNYG00000018125	zgc:153215	99	43.182	ENSOANG00000015735	-	62	43.182	Ornithorhynchus_anatinus
ENSPNYG00000018125	zgc:153215	97	52.941	ENSOMEG00000004220	zgc:153215	96	53.186	Oryzias_melastigma
ENSPNYG00000018125	zgc:153215	95	45.882	ENSPKIG00000014851	zgc:153215	83	45.882	Paramormyrops_kingsleyae
ENSPNYG00000018125	zgc:153215	94	46.154	ENSPKIG00000018719	rbm12b	63	46.154	Paramormyrops_kingsleyae
ENSPNYG00000018125	zgc:153215	97	63.736	ENSPFOG00000017451	zgc:153215	74	63.736	Poecilia_formosa
ENSPNYG00000018125	zgc:153215	97	48.402	ENSPLAG00000000232	zgc:153215	99	48.402	Poecilia_latipinna
ENSPNYG00000018125	zgc:153215	97	48.975	ENSPMEG00000016662	zgc:153215	99	48.975	Poecilia_mexicana
ENSPNYG00000018125	zgc:153215	97	43.902	ENSPREG00000018608	zgc:153215	99	43.902	Poecilia_reticulata
ENSPNYG00000018125	zgc:153215	97	50.526	ENSPNAG00000025628	zgc:153215	86	50.526	Pygocentrus_nattereri
ENSPNYG00000018125	zgc:153215	94	51.136	ENSSFOG00015009427	zgc:153215	83	51.136	Scleropages_formosus
ENSPNYG00000018125	zgc:153215	97	50.731	ENSSMAG00000019013	zgc:153215	96	50.731	Scophthalmus_maximus
ENSPNYG00000018125	zgc:153215	97	53.292	ENSSDUG00000012545	zgc:153215	98	53.292	Seriola_dumerili
ENSPNYG00000018125	zgc:153215	94	72.840	ENSSLDG00000013581	zgc:153215	80	65.385	Seriola_lalandi_dorsalis
ENSPNYG00000018125	zgc:153215	97	42.697	ENSSPUG00000016954	RBM12B	77	42.697	Sphenodon_punctatus
ENSPNYG00000018125	zgc:153215	97	54.831	ENSSPAG00000023584	zgc:153215	98	54.157	Stegastes_partitus
ENSPNYG00000018125	zgc:153215	68	69.737	ENSTNIG00000018374	-	99	42.711	Tetraodon_nigroviridis
ENSPNYG00000018125	zgc:153215	97	30.839	ENSXETG00000014694	rbm12b	99	30.839	Xenopus_tropicalis
ENSPNYG00000018125	zgc:153215	96	45.082	ENSXCOG00000019654	zgc:153215	98	45.082	Xiphophorus_couchianus
ENSPNYG00000018125	zgc:153215	97	39.732	ENSXMAG00000013169	-	97	39.732	Xiphophorus_maculatus