EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018262 (Gene tree)
Gene ID: 102210317
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: RNA polymerase II-associated protein 3-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 9948 bases
Position: chrJH419234.1:4739810-4749757
Accession: 102210317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024153	RRM_1	PF00076.22	8.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024751	-	2763	XM_005728685	ENSPNYP00000024153	662 (aa)	XP_005728742	UPI0006AB1F6F

Gene Model

Click here to download ENSPNYG00000018262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018262	si:dkey-33c12.4	61	40.048	ENSPNYG00000001047	-	57	42.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018262	si:dkey-33c12.4	98	64.723	ENSAPOG00000005058	si:dkey-33c12.4	98	64.574	Acanthochromis_polyacanthus
ENSPNYG00000018262	si:dkey-33c12.4	55	32.533	ENSAPOG00000019633	zgc:123010	58	32.796	Acanthochromis_polyacanthus
ENSPNYG00000018262	si:dkey-33c12.4	98	63.964	ENSAOCG00000020066	si:dkey-33c12.4	97	64.264	Amphiprion_ocellaris
ENSPNYG00000018262	si:dkey-33c12.4	55	32.533	ENSAOCG00000005910	zgc:123010	58	32.796	Amphiprion_ocellaris
ENSPNYG00000018262	si:dkey-33c12.4	55	32.533	ENSAPEG00000014305	zgc:123010	62	32.533	Amphiprion_percula
ENSPNYG00000018262	si:dkey-33c12.4	64	35.461	ENSATEG00000022160	-	80	35.211	Anabas_testudineus
ENSPNYG00000018262	si:dkey-33c12.4	55	41.287	ENSATEG00000018302	-	80	35.472	Anabas_testudineus
ENSPNYG00000018262	si:dkey-33c12.4	99	60.902	ENSATEG00000018885	si:dkey-33c12.4	99	60.565	Anabas_testudineus
ENSPNYG00000018262	si:dkey-33c12.4	51	43.182	ENSACLG00000003019	-	74	36.709	Astatotilapia_calliptera
ENSPNYG00000018262	si:dkey-33c12.4	68	32.639	ENSACLG00000012346	-	65	36.634	Astatotilapia_calliptera
ENSPNYG00000018262	si:dkey-33c12.4	100	99.245	ENSACLG00000014192	si:dkey-33c12.4	100	98.131	Astatotilapia_calliptera
ENSPNYG00000018262	si:dkey-33c12.4	96	37.351	ENSAMXG00000010871	si:dkey-33c12.4	56	45.431	Astyanax_mexicanus
ENSPNYG00000018262	si:dkey-33c12.4	85	32.014	ENSCPBG00000024454	-	50	35.027	Chrysemys_picta_bellii
ENSPNYG00000018262	si:dkey-33c12.4	76	34.972	ENSCSEG00000002755	-	63	41.033	Cynoglossus_semilaevis
ENSPNYG00000018262	si:dkey-33c12.4	62	38.717	ENSCVAG00000004187	-	75	35.625	Cyprinodon_variegatus
ENSPNYG00000018262	si:dkey-33c12.4	100	56.652	ENSCVAG00000006564	-	100	54.559	Cyprinodon_variegatus
ENSPNYG00000018262	si:dkey-33c12.4	68	36.719	ENSDARG00000039082	zgc:123010	68	31.139	Danio_rerio
ENSPNYG00000018262	si:dkey-33c12.4	96	35.357	ENSDARG00000057890	si:dkey-33c12.4	55	42.632	Danio_rerio
ENSPNYG00000018262	si:dkey-33c12.4	96	39.470	ENSELUG00000002009	si:dkey-33c12.4	78	60.714	Esox_lucius
ENSPNYG00000018262	si:dkey-33c12.4	83	37.168	ENSELUG00000001633	-	60	40.547	Esox_lucius
ENSPNYG00000018262	si:dkey-33c12.4	68	31.511	ENSELUG00000021447	-	86	30.990	Esox_lucius
ENSPNYG00000018262	si:dkey-33c12.4	99	62.105	ENSFHEG00000005521	si:dkey-33c12.4	100	60.565	Fundulus_heteroclitus
ENSPNYG00000018262	si:dkey-33c12.4	50	36.782	ENSGMOG00000018473	zgc:123010	88	36.782	Gadus_morhua
ENSPNYG00000018262	si:dkey-33c12.4	50	43.605	ENSGAFG00000016594	-	52	42.814	Gambusia_affinis
ENSPNYG00000018262	si:dkey-33c12.4	99	61.619	ENSGAFG00000017596	si:dkey-33c12.4	99	61.769	Gambusia_affinis
ENSPNYG00000018262	si:dkey-33c12.4	56	32.637	ENSGAFG00000009373	zgc:123010	55	42.236	Gambusia_affinis
ENSPNYG00000018262	si:dkey-33c12.4	100	99.698	ENSHBUG00000010735	si:dkey-33c12.4	100	99.698	Haplochromis_burtoni
ENSPNYG00000018262	si:dkey-33c12.4	68	32.639	ENSHBUG00000016720	-	65	36.634	Haplochromis_burtoni
ENSPNYG00000018262	si:dkey-33c12.4	97	38.416	ENSIPUG00000005998	si:dkey-33c12.4	99	37.719	Ictalurus_punctatus
ENSPNYG00000018262	si:dkey-33c12.4	52	41.714	ENSKMAG00000006468	-	56	41.429	Kryptolebias_marmoratus
ENSPNYG00000018262	si:dkey-33c12.4	99	60.483	ENSKMAG00000016610	si:dkey-33c12.4	99	60.902	Kryptolebias_marmoratus
ENSPNYG00000018262	si:dkey-33c12.4	55	32.800	ENSKMAG00000021350	zgc:123010	59	32.800	Kryptolebias_marmoratus
ENSPNYG00000018262	si:dkey-33c12.4	61	39.100	ENSLBEG00000028046	-	62	39.430	Labrus_bergylta
ENSPNYG00000018262	si:dkey-33c12.4	99	55.976	ENSLBEG00000021088	-	99	56.884	Labrus_bergylta
ENSPNYG00000018262	si:dkey-33c12.4	90	55.464	ENSLBEG00000017203	-	99	56.507	Labrus_bergylta
ENSPNYG00000018262	si:dkey-33c12.4	88	31.169	ENSLACG00000004602	-	57	45.263	Latimeria_chalumnae
ENSPNYG00000018262	si:dkey-33c12.4	84	37.288	ENSLOCG00000001861	-	54	42.063	Lepisosteus_oculatus
ENSPNYG00000018262	si:dkey-33c12.4	67	33.974	ENSLOCG00000008967	zgc:123010	82	32.692	Lepisosteus_oculatus
ENSPNYG00000018262	si:dkey-33c12.4	99	65.158	ENSMAMG00000000111	si:dkey-33c12.4	99	65.158	Mastacembelus_armatus
ENSPNYG00000018262	si:dkey-33c12.4	76	36.133	ENSMAMG00000004311	-	58	43.716	Mastacembelus_armatus
ENSPNYG00000018262	si:dkey-33c12.4	61	40.048	ENSMZEG00005000585	-	74	36.897	Maylandia_zebra
ENSPNYG00000018262	si:dkey-33c12.4	100	99.849	ENSMZEG00005014276	si:dkey-33c12.4	100	99.849	Maylandia_zebra
ENSPNYG00000018262	si:dkey-33c12.4	55	33.067	ENSMALG00000017698	zgc:123010	59	33.333	Monopterus_albus
ENSPNYG00000018262	si:dkey-33c12.4	56	40.665	ENSMALG00000003167	-	55	40.731	Monopterus_albus
ENSPNYG00000018262	si:dkey-33c12.4	99	61.364	ENSMALG00000002265	si:dkey-33c12.4	99	62.500	Monopterus_albus
ENSPNYG00000018262	si:dkey-33c12.4	52	42.507	ENSONIG00000007538	-	90	55.357	Oreochromis_niloticus
ENSPNYG00000018262	si:dkey-33c12.4	55	30.159	ENSONIG00000018353	zgc:123010	63	30.504	Oreochromis_niloticus
ENSPNYG00000018262	si:dkey-33c12.4	97	52.174	ENSORLG00000029651	si:dkey-33c12.4	96	51.938	Oryzias_latipes
ENSPNYG00000018262	si:dkey-33c12.4	87	35.355	ENSORLG00000030385	-	69	36.404	Oryzias_latipes
ENSPNYG00000018262	si:dkey-33c12.4	97	52.886	ENSORLG00020008750	si:dkey-33c12.4	96	50.896	Oryzias_latipes_hni
ENSPNYG00000018262	si:dkey-33c12.4	80	36.604	ENSORLG00015008400	-	69	37.079	Oryzias_latipes_hsok
ENSPNYG00000018262	si:dkey-33c12.4	81	34.973	ENSOMEG00000009428	-	51	42.478	Oryzias_melastigma
ENSPNYG00000018262	si:dkey-33c12.4	98	51.036	ENSOMEG00000008913	-	98	51.412	Oryzias_melastigma
ENSPNYG00000018262	si:dkey-33c12.4	92	38.401	ENSPKIG00000011819	-	52	45.799	Paramormyrops_kingsleyae
ENSPNYG00000018262	si:dkey-33c12.4	51	38.813	ENSPMGG00000020251	zgc:123010	77	38.813	Periophthalmus_magnuspinnatus
ENSPNYG00000018262	si:dkey-33c12.4	99	60.831	ENSPFOG00000009143	si:dkey-33c12.4	99	61.276	Poecilia_formosa
ENSPNYG00000018262	si:dkey-33c12.4	50	43.149	ENSPFOG00000017092	-	84	38.756	Poecilia_formosa
ENSPNYG00000018262	si:dkey-33c12.4	96	60.836	ENSPLAG00000022537	si:dkey-33c12.4	99	61.290	Poecilia_latipinna
ENSPNYG00000018262	si:dkey-33c12.4	99	60.386	ENSPMEG00000015590	si:dkey-33c12.4	99	60.831	Poecilia_mexicana
ENSPNYG00000018262	si:dkey-33c12.4	50	42.647	ENSPMEG00000009905	-	64	38.313	Poecilia_mexicana
ENSPNYG00000018262	si:dkey-33c12.4	50	42.982	ENSPREG00000016861	-	66	38.517	Poecilia_reticulata
ENSPNYG00000018262	si:dkey-33c12.4	55	32.447	ENSPNAG00000007579	zgc:123010	59	32.708	Pygocentrus_nattereri
ENSPNYG00000018262	si:dkey-33c12.4	97	37.240	ENSPNAG00000018386	si:dkey-33c12.4	56	44.304	Pygocentrus_nattereri
ENSPNYG00000018262	si:dkey-33c12.4	84	38.918	ENSSFOG00015009199	-	79	37.570	Scleropages_formosus
ENSPNYG00000018262	si:dkey-33c12.4	66	31.757	ENSSFOG00015021394	zgc:123010	84	31.206	Scleropages_formosus
ENSPNYG00000018262	si:dkey-33c12.4	55	42.818	ENSSFOG00015005186	-	54	42.818	Scleropages_formosus
ENSPNYG00000018262	si:dkey-33c12.4	74	35.050	ENSSMAG00000010960	-	55	41.713	Scophthalmus_maximus
ENSPNYG00000018262	si:dkey-33c12.4	99	60.090	ENSSMAG00000008147	si:dkey-33c12.4	99	60.688	Scophthalmus_maximus
ENSPNYG00000018262	si:dkey-33c12.4	55	32.533	ENSSDUG00000008651	zgc:123010	58	32.533	Seriola_dumerili
ENSPNYG00000018262	si:dkey-33c12.4	99	65.762	ENSSDUG00000003213	si:dkey-33c12.4	99	65.762	Seriola_dumerili
ENSPNYG00000018262	si:dkey-33c12.4	61	41.190	ENSSDUG00000010976	-	72	37.053	Seriola_dumerili
ENSPNYG00000018262	si:dkey-33c12.4	55	32.533	ENSSLDG00000019386	zgc:123010	61	32.796	Seriola_lalandi_dorsalis
ENSPNYG00000018262	si:dkey-33c12.4	99	65.857	ENSSLDG00000009448	si:dkey-33c12.4	99	65.857	Seriola_lalandi_dorsalis
ENSPNYG00000018262	si:dkey-33c12.4	73	36.456	ENSSLDG00000012846	-	75	36.270	Seriola_lalandi_dorsalis
ENSPNYG00000018262	si:dkey-33c12.4	72	35.744	ENSSPAG00000004843	-	52	42.857	Stegastes_partitus
ENSPNYG00000018262	si:dkey-33c12.4	100	65.932	ENSSPAG00000022577	-	100	66.520	Stegastes_partitus
ENSPNYG00000018262	si:dkey-33c12.4	55	33.333	ENSSPAG00000013621	zgc:123010	58	33.602	Stegastes_partitus
ENSPNYG00000018262	si:dkey-33c12.4	65	34.884	ENSTRUG00000000057	-	61	36.340	Takifugu_rubripes
ENSPNYG00000018262	si:dkey-33c12.4	59	55.808	ENSTRUG00000022374	si:dkey-33c12.4	90	46.224	Takifugu_rubripes
ENSPNYG00000018262	si:dkey-33c12.4	54	30.997	ENSTNIG00000001303	zgc:123010	91	30.728	Tetraodon_nigroviridis
ENSPNYG00000018262	si:dkey-33c12.4	54	31.903	ENSXCOG00000012281	zgc:123010	72	31.635	Xiphophorus_couchianus
ENSPNYG00000018262	si:dkey-33c12.4	99	61.562	ENSXMAG00000018535	si:dkey-33c12.4	99	61.862	Xiphophorus_maculatus