EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018303 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 13604 bases
Position: chrJH419289.1:2520191-2533794
Accession: 102199675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024255	ResIII	PF04851.15	5.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024853	-	2445	XM_005738579	ENSPNYP00000024255	814 (aa)	XP_005738636	-

Gene Model

Click here to download ENSPNYG00000018303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018303	rad54b	66	31.588	ENSPNYG00000013185	ercc6l	52	31.588
ENSPNYG00000018303	rad54b	61	32.150	ENSPNYG00000013001	chd1l	50	32.150
ENSPNYG00000018303	rad54b	82	43.192	ENSPNYG00000002942	rad54l	92	43.192
ENSPNYG00000018303	rad54b	66	30.537	ENSPNYG00000015347	ercc6l2	56	30.201
ENSPNYG00000018303	rad54b	56	31.781	ENSPNYG00000010087	smarcad1a	60	31.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018303	rad54b	96	58.481	ENSG00000197275	RAD54B	86	58.481	Homo_sapiens
ENSPNYG00000018303	rad54b	88	57.967	ENSG00000265817	FSBP	99	57.967	Homo_sapiens
ENSPNYG00000018303	rad54b	96	59.446	ENSAMEG00000005834	-	86	59.446	Ailuropoda_melanoleuca
ENSPNYG00000018303	rad54b	96	91.762	ENSACIG00000013005	rad54b	89	91.762	Amphilophus_citrinellus
ENSPNYG00000018303	rad54b	97	86.108	ENSAOCG00000008523	rad54b	86	86.108	Amphiprion_ocellaris
ENSPNYG00000018303	rad54b	97	82.206	ENSAPEG00000001673	rad54b	90	82.206	Amphiprion_percula
ENSPNYG00000018303	rad54b	97	85.316	ENSATEG00000001527	rad54b	91	85.316	Anabas_testudineus
ENSPNYG00000018303	rad54b	96	62.152	ENSAPLG00000014366	-	85	62.025	Anas_platyrhynchos
ENSPNYG00000018303	rad54b	97	59.649	ENSACAG00000003671	-	99	59.649	Anolis_carolinensis
ENSPNYG00000018303	rad54b	77	60.250	ENSANAG00000019528	-	99	60.250	Aotus_nancymaae
ENSPNYG00000018303	rad54b	97	95.734	ENSACLG00000007826	rad54b	93	95.734	Astatotilapia_calliptera
ENSPNYG00000018303	rad54b	95	68.966	ENSAMXG00000039985	rad54b	94	68.528	Astyanax_mexicanus
ENSPNYG00000018303	rad54b	96	59.521	ENSBTAG00000000632	RAD54B	87	59.521	Bos_taurus
ENSPNYG00000018303	rad54b	88	35.591	WBGene00013792	Y116A8C.13	84	35.724	Caenorhabditis_elegans
ENSPNYG00000018303	rad54b	96	59.189	ENSCJAG00000000080	-	99	58.322	Callithrix_jacchus
ENSPNYG00000018303	rad54b	96	59.673	ENSCAFG00000009179	RAD54B	87	59.673	Canis_familiaris
ENSPNYG00000018303	rad54b	96	59.799	ENSCAFG00020012084	-	87	59.799	Canis_lupus_dingo
ENSPNYG00000018303	rad54b	96	59.773	ENSCHIG00000008230	-	87	59.773	Capra_hircus
ENSPNYG00000018303	rad54b	97	58.780	ENSTSYG00000013234	-	88	58.780	Carlito_syrichta
ENSPNYG00000018303	rad54b	96	59.647	ENSCPOG00000011643	-	87	59.647	Cavia_porcellus
ENSPNYG00000018303	rad54b	96	59.222	ENSCCAG00000011754	-	99	58.095	Cebus_capucinus
ENSPNYG00000018303	rad54b	96	58.629	ENSCATG00000030661	-	99	58.127	Cercocebus_atys
ENSPNYG00000018303	rad54b	95	59.212	ENSCLAG00000010476	-	88	59.212	Chinchilla_lanigera
ENSPNYG00000018303	rad54b	96	58.756	ENSCSAG00000012712	-	86	58.682	Chlorocebus_sabaeus
ENSPNYG00000018303	rad54b	95	62.991	ENSCPBG00000003204	-	83	65.272	Chrysemys_picta_bellii
ENSPNYG00000018303	rad54b	96	58.883	ENSCANG00000017939	-	99	58.264	Colobus_angolensis_palliatus
ENSPNYG00000018303	rad54b	96	57.862	ENSCGRG00001020184	Rad54b	89	57.862	Cricetulus_griseus_chok1gshd
ENSPNYG00000018303	rad54b	96	56.855	ENSCGRG00000016752	Rad54b	89	56.855	Cricetulus_griseus_crigri
ENSPNYG00000018303	rad54b	96	82.592	ENSCSEG00000001601	rad54b	93	82.592	Cynoglossus_semilaevis
ENSPNYG00000018303	rad54b	96	84.036	ENSCVAG00000009200	rad54b	89	84.036	Cyprinodon_variegatus
ENSPNYG00000018303	rad54b	95	67.005	ENSDARG00000092134	rad54b	99	68.281	Danio_rerio
ENSPNYG00000018303	rad54b	95	60.000	ENSDNOG00000015535	-	85	60.000	Dasypus_novemcinctus
ENSPNYG00000018303	rad54b	97	58.509	ENSDORG00000002492	Rad54b	91	58.509	Dipodomys_ordii
ENSPNYG00000018303	rad54b	82	63.001	ENSETEG00000010605	-	85	63.001	Echinops_telfairi
ENSPNYG00000018303	rad54b	96	51.690	ENSEBUG00000009104	rad54b	84	51.694	Eptatretus_burgeri
ENSPNYG00000018303	rad54b	96	59.074	ENSEASG00005004021	-	89	59.074	Equus_asinus_asinus
ENSPNYG00000018303	rad54b	96	59.673	ENSECAG00000021949	-	92	59.673	Equus_caballus
ENSPNYG00000018303	rad54b	79	55.556	ENSEEUG00000008056	-	71	55.556	Erinaceus_europaeus
ENSPNYG00000018303	rad54b	97	76.884	ENSELUG00000009287	rad54b	85	76.884	Esox_lucius
ENSPNYG00000018303	rad54b	95	60.102	ENSFCAG00000015513	-	99	59.724	Felis_catus
ENSPNYG00000018303	rad54b	96	61.461	ENSFALG00000005467	-	85	61.461	Ficedula_albicollis
ENSPNYG00000018303	rad54b	96	59.142	ENSFDAG00000020541	-	87	59.142	Fukomys_damarensis
ENSPNYG00000018303	rad54b	97	80.427	ENSFHEG00000014382	rad54b	88	80.427	Fundulus_heteroclitus
ENSPNYG00000018303	rad54b	96	79.747	ENSGMOG00000014774	rad54b	98	79.747	Gadus_morhua
ENSPNYG00000018303	rad54b	95	61.929	ENSGALG00000043597	RAD54B	85	61.929	Gallus_gallus
ENSPNYG00000018303	rad54b	97	83.438	ENSGAFG00000007901	rad54b	94	83.438	Gambusia_affinis
ENSPNYG00000018303	rad54b	97	82.652	ENSGACG00000009128	rad54b	87	82.652	Gasterosteus_aculeatus
ENSPNYG00000018303	rad54b	95	63.104	ENSGAGG00000018747	-	85	62.944	Gopherus_agassizii
ENSPNYG00000018303	rad54b	96	58.491	ENSGGOG00000023516	-	87	58.491	Gorilla_gorilla
ENSPNYG00000018303	rad54b	97	95.262	ENSHBUG00000016017	rad54b	86	95.262	Haplochromis_burtoni
ENSPNYG00000018303	rad54b	96	58.677	ENSHGLG00000008263	RAD54B	86	58.677	Heterocephalus_glaber_female
ENSPNYG00000018303	rad54b	96	57.869	ENSHGLG00100008108	-	86	57.869	Heterocephalus_glaber_male
ENSPNYG00000018303	rad54b	97	78.113	ENSHCOG00000004764	rad54b	98	76.000	Hippocampus_comes
ENSPNYG00000018303	rad54b	96	67.500	ENSIPUG00000018531	rad54b	84	67.500	Ictalurus_punctatus
ENSPNYG00000018303	rad54b	95	58.831	ENSSTOG00000010791	-	86	58.831	Ictidomys_tridecemlineatus
ENSPNYG00000018303	rad54b	96	59.068	ENSJJAG00000010314	Rad54b	86	59.068	Jaculus_jaculus
ENSPNYG00000018303	rad54b	95	84.903	ENSKMAG00000004744	rad54b	91	84.903	Kryptolebias_marmoratus
ENSPNYG00000018303	rad54b	91	63.382	ENSLACG00000000859	-	100	63.382	Latimeria_chalumnae
ENSPNYG00000018303	rad54b	97	68.789	ENSLOCG00000010100	rad54b	94	68.703	Lepisosteus_oculatus
ENSPNYG00000018303	rad54b	96	57.233	ENSLAFG00000015315	-	98	57.233	Loxodonta_africana
ENSPNYG00000018303	rad54b	96	58.756	ENSMFAG00000031629	-	99	58.264	Macaca_fascicularis
ENSPNYG00000018303	rad54b	96	58.756	ENSMMUG00000005659	-	86	58.756	Macaca_mulatta
ENSPNYG00000018303	rad54b	96	58.629	ENSMNEG00000016408	-	86	58.629	Macaca_nemestrina
ENSPNYG00000018303	rad54b	96	58.756	ENSMLEG00000006946	-	86	58.682	Mandrillus_leucophaeus
ENSPNYG00000018303	rad54b	97	82.728	ENSMAMG00000012269	rad54b	90	82.728	Mastacembelus_armatus
ENSPNYG00000018303	rad54b	97	95.734	ENSMZEG00005005281	rad54b	96	95.734	Maylandia_zebra
ENSPNYG00000018303	rad54b	95	61.548	ENSMGAG00000012024	-	85	61.548	Meleagris_gallopavo
ENSPNYG00000018303	rad54b	96	57.557	ENSMAUG00000013586	Rad54b	89	57.557	Mesocricetus_auratus
ENSPNYG00000018303	rad54b	95	59.669	ENSMICG00000000754	-	90	59.669	Microcebus_murinus
ENSPNYG00000018303	rad54b	96	58.712	ENSMOCG00000020035	Rad54b	88	58.712	Microtus_ochrogaster
ENSPNYG00000018303	rad54b	97	84.025	ENSMMOG00000003394	rad54b	90	84.025	Mola_mola
ENSPNYG00000018303	rad54b	95	59.137	ENSMODG00000007343	-	97	59.137	Monodelphis_domestica
ENSPNYG00000018303	rad54b	78	84.424	ENSMALG00000001520	rad54b	99	84.424	Monopterus_albus
ENSPNYG00000018303	rad54b	95	58.981	MGP_CAROLIEiJ_G0025810	Rad54b	87	58.981	Mus_caroli
ENSPNYG00000018303	rad54b	95	58.101	ENSMUSG00000078773	Rad54b	87	58.101	Mus_musculus
ENSPNYG00000018303	rad54b	95	59.108	MGP_PahariEiJ_G0023933	Rad54b	87	59.108	Mus_pahari
ENSPNYG00000018303	rad54b	95	58.981	MGP_SPRETEiJ_G0026758	Rad54b	87	58.981	Mus_spretus
ENSPNYG00000018303	rad54b	96	58.764	ENSMPUG00000008878	-	97	58.764	Mustela_putorius_furo
ENSPNYG00000018303	rad54b	95	60.229	ENSMLUG00000008953	-	86	60.229	Myotis_lucifugus
ENSPNYG00000018303	rad54b	96	58.302	ENSNGAG00000017537	Rad54b	88	58.302	Nannospalax_galili
ENSPNYG00000018303	rad54b	97	95.609	ENSNBRG00000013394	rad54b	93	95.609	Neolamprologus_brichardi
ENSPNYG00000018303	rad54b	96	58.407	ENSNLEG00000003062	-	99	57.888	Nomascus_leucogenys
ENSPNYG00000018303	rad54b	77	61.381	ENSMEUG00000012426	-	69	61.381	Notamacropus_eugenii
ENSPNYG00000018303	rad54b	96	58.942	ENSODEG00000019564	-	87	58.942	Octodon_degus
ENSPNYG00000018303	rad54b	88	75.000	ENSODEG00000002650	-	93	73.913	Octodon_degus
ENSPNYG00000018303	rad54b	97	94.332	ENSONIG00000006067	rad54b	87	94.332	Oreochromis_niloticus
ENSPNYG00000018303	rad54b	91	59.868	ENSOANG00000011348	-	99	59.868	Ornithorhynchus_anatinus
ENSPNYG00000018303	rad54b	97	58.801	ENSOCUG00000016478	-	87	58.801	Oryctolagus_cuniculus
ENSPNYG00000018303	rad54b	97	83.458	ENSORLG00000008918	rad54b	100	85.271	Oryzias_latipes
ENSPNYG00000018303	rad54b	78	85.116	ENSORLG00020012171	rad54b	100	85.116	Oryzias_latipes_hni
ENSPNYG00000018303	rad54b	97	82.981	ENSORLG00015018536	rad54b	85	82.981	Oryzias_latipes_hsok
ENSPNYG00000018303	rad54b	94	84.355	ENSOMEG00000004345	rad54b	100	84.355	Oryzias_melastigma
ENSPNYG00000018303	rad54b	96	57.828	ENSOGAG00000007854	-	86	57.828	Otolemur_garnettii
ENSPNYG00000018303	rad54b	96	59.673	ENSOARG00000007691	-	97	59.673	Ovis_aries
ENSPNYG00000018303	rad54b	96	57.396	ENSPPAG00000029572	-	86	57.396	Pan_paniscus
ENSPNYG00000018303	rad54b	95	59.975	ENSPPRG00000007571	-	99	59.586	Panthera_pardus
ENSPNYG00000018303	rad54b	88	59.724	ENSPTIG00000012670	-	99	59.724	Panthera_tigris_altaica
ENSPNYG00000018303	rad54b	96	58.660	ENSPTRG00000020427	-	99	58.162	Pan_troglodytes
ENSPNYG00000018303	rad54b	96	58.756	ENSPANG00000019566	-	86	58.756	Papio_anubis
ENSPNYG00000018303	rad54b	97	68.414	ENSPKIG00000014974	rad54b	86	68.414	Paramormyrops_kingsleyae
ENSPNYG00000018303	rad54b	95	61.343	ENSPSIG00000002383	-	95	61.343	Pelodiscus_sinensis
ENSPNYG00000018303	rad54b	96	58.291	ENSPEMG00000012133	Rad54b	88	58.291	Peromyscus_maniculatus_bairdii
ENSPNYG00000018303	rad54b	95	58.376	ENSPMAG00000002916	rad54b	98	58.376	Petromyzon_marinus
ENSPNYG00000018303	rad54b	95	59.770	ENSPCIG00000020151	-	91	59.719	Phascolarctos_cinereus
ENSPNYG00000018303	rad54b	96	83.965	ENSPFOG00000023411	rad54b	84	84.071	Poecilia_formosa
ENSPNYG00000018303	rad54b	96	83.838	ENSPLAG00000010430	rad54b	84	83.944	Poecilia_latipinna
ENSPNYG00000018303	rad54b	96	84.399	ENSPMEG00000016873	rad54b	93	84.399	Poecilia_mexicana
ENSPNYG00000018303	rad54b	97	84.211	ENSPREG00000018443	rad54b	92	84.211	Poecilia_reticulata
ENSPNYG00000018303	rad54b	96	58.660	ENSPPYG00000018750	-	86	58.586	Pongo_abelii
ENSPNYG00000018303	rad54b	95	59.542	ENSPCOG00000026845	-	99	58.702	Propithecus_coquereli
ENSPNYG00000018303	rad54b	90	58.221	ENSPVAG00000000261	-	85	58.221	Pteropus_vampyrus
ENSPNYG00000018303	rad54b	96	67.844	ENSPNAG00000000295	rad54b	93	67.213	Pygocentrus_nattereri
ENSPNYG00000018303	rad54b	96	58.365	ENSRNOG00000039949	Rad54b	88	58.365	Rattus_norvegicus
ENSPNYG00000018303	rad54b	96	58.376	ENSRBIG00000020419	-	86	58.302	Rhinopithecus_bieti
ENSPNYG00000018303	rad54b	96	58.376	ENSRROG00000039897	-	86	58.376	Rhinopithecus_roxellana
ENSPNYG00000018303	rad54b	93	36.342	YBR073W	RDH54	82	36.124	Saccharomyces_cerevisiae
ENSPNYG00000018303	rad54b	96	59.189	ENSSBOG00000028501	-	86	59.114	Saimiri_boliviensis_boliviensis
ENSPNYG00000018303	rad54b	95	60.178	ENSSHAG00000017038	-	85	60.178	Sarcophilus_harrisii
ENSPNYG00000018303	rad54b	70	71.454	ENSSFOG00015008483	rad54b	89	71.454	Scleropages_formosus
ENSPNYG00000018303	rad54b	96	85.120	ENSSMAG00000018659	rad54b	91	83.965	Scophthalmus_maximus
ENSPNYG00000018303	rad54b	93	85.494	ENSSDUG00000001122	rad54b	81	85.494	Seriola_dumerili
ENSPNYG00000018303	rad54b	97	85.750	ENSSLDG00000013787	rad54b	92	82.828	Seriola_lalandi_dorsalis
ENSPNYG00000018303	rad54b	97	60.625	ENSSPUG00000016497	-	89	60.625	Sphenodon_punctatus
ENSPNYG00000018303	rad54b	96	87.516	ENSSPAG00000012800	rad54b	90	87.516	Stegastes_partitus
ENSPNYG00000018303	rad54b	95	59.363	ENSSSCG00000006101	-	97	59.363	Sus_scrofa
ENSPNYG00000018303	rad54b	96	61.917	ENSTGUG00000011880	-	86	61.917	Taeniopygia_guttata
ENSPNYG00000018303	rad54b	96	82.219	ENSTRUG00000010015	rad54b	84	82.219	Takifugu_rubripes
ENSPNYG00000018303	rad54b	96	54.477	ENSTTRG00000006312	-	87	54.477	Tursiops_truncatus
ENSPNYG00000018303	rad54b	96	59.748	ENSUMAG00000016401	-	86	59.748	Ursus_maritimus
ENSPNYG00000018303	rad54b	96	59.446	ENSVPAG00000003157	-	87	59.446	Vicugna_pacos
ENSPNYG00000018303	rad54b	96	53.015	ENSXETG00000025924	rad54b	99	53.015	Xenopus_tropicalis
ENSPNYG00000018303	rad54b	97	82.979	ENSXMAG00000013141	rad54b	93	83.083	Xiphophorus_maculatus