EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000018401 (Gene tree)
Gene ID: 102195096
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 9739 bases
Position: chrJH419673.1:21479-31217
Accession: 102195096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024453	RNase_T	PF00929.24	1.5e-32	1	1
ENSPNYP00000024468	RNase_T	PF00929.24	6.2e-27	1	1
ENSPNYP00000024480	RNase_T	PF00929.24	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025053	-	780	XM_005753814	ENSPNYP00000024453	259 (aa)	XP_005753871	UPI0003AF62C7
ENSPNYT00000025081	-	444	-	ENSPNYP00000024480	147 (aa)	-	-
ENSPNYT00000025069	-	717	-	ENSPNYP00000024468	238 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000018401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018401	smfn	83	71.500	ENSG00000076043	REXO2	96	79.006	Homo_sapiens
ENSPNYG00000018401	smfn	82	72.768	ENSAMEG00000013263	REXO2	95	72.768	Ailuropoda_melanoleuca
ENSPNYG00000018401	smfn	71	89.189	ENSACIG00000023553	smfn	100	89.189	Amphilophus_citrinellus
ENSPNYG00000018401	smfn	65	74.118	ENSAOCG00000011565	smfn	90	74.118	Amphiprion_ocellaris
ENSPNYG00000018401	smfn	97	73.810	ENSAPEG00000012435	smfn	90	73.810	Amphiprion_percula
ENSPNYG00000018401	smfn	95	70.956	ENSATEG00000015385	smfn	97	70.956	Anabas_testudineus
ENSPNYG00000018401	smfn	73	76.562	ENSAPLG00000005045	REXO2	94	76.562	Anas_platyrhynchos
ENSPNYG00000018401	smfn	74	69.744	ENSACAG00000011631	REXO2	91	69.744	Anolis_carolinensis
ENSPNYG00000018401	smfn	92	64.979	ENSANAG00000020834	REXO2	95	71.806	Aotus_nancymaae
ENSPNYG00000018401	smfn	100	99.614	ENSACLG00000024566	smfn	100	99.614	Astatotilapia_calliptera
ENSPNYG00000018401	smfn	82	71.806	ENSBTAG00000005843	REXO2	95	71.806	Bos_taurus
ENSPNYG00000018401	smfn	71	47.283	WBGene00007429	C08B6.8	92	55.556	Caenorhabditis_elegans
ENSPNYG00000018401	smfn	60	60.227	ENSCJAG00000044911	-	94	60.227	Callithrix_jacchus
ENSPNYG00000018401	smfn	82	70.925	ENSCJAG00000012434	REXO2	95	70.925	Callithrix_jacchus
ENSPNYG00000018401	smfn	76	76.617	ENSCAFG00000013511	REXO2	99	64.407	Canis_familiaris
ENSPNYG00000018401	smfn	76	77.612	ENSCAFG00020002513	REXO2	85	77.612	Canis_lupus_dingo
ENSPNYG00000018401	smfn	82	71.806	ENSCHIG00000009264	REXO2	95	71.806	Capra_hircus
ENSPNYG00000018401	smfn	82	71.366	ENSTSYG00000002237	REXO2	95	71.366	Carlito_syrichta
ENSPNYG00000018401	smfn	75	65.761	ENSTSYG00000027948	-	99	66.304	Carlito_syrichta
ENSPNYG00000018401	smfn	69	79.558	ENSCAPG00000006093	REXO2	96	79.558	Cavia_aperea
ENSPNYG00000018401	smfn	86	72.124	ENSCPOG00000010548	REXO2	97	70.870	Cavia_porcellus
ENSPNYG00000018401	smfn	82	71.806	ENSCCAG00000034979	REXO2	95	71.806	Cebus_capucinus
ENSPNYG00000018401	smfn	77	74.641	ENSCATG00000015278	REXO2	95	72.768	Cercocebus_atys
ENSPNYG00000018401	smfn	82	73.543	ENSCLAG00000011195	REXO2	94	73.543	Chinchilla_lanigera
ENSPNYG00000018401	smfn	77	74.641	ENSCSAG00000002754	REXO2	95	72.768	Chlorocebus_sabaeus
ENSPNYG00000018401	smfn	82	71.429	ENSCHOG00000000642	-	95	71.429	Choloepus_hoffmanni
ENSPNYG00000018401	smfn	56	73.810	ENSCHOG00000013497	REXO2	79	81.081	Choloepus_hoffmanni
ENSPNYG00000018401	smfn	54	69.930	ENSCPBG00000009359	REXO2	99	69.930	Chrysemys_picta_bellii
ENSPNYG00000018401	smfn	71	60.656	ENSCING00000009858	-	88	60.656	Ciona_intestinalis
ENSPNYG00000018401	smfn	77	74.641	ENSCANG00000034756	REXO2	95	72.768	Colobus_angolensis_palliatus
ENSPNYG00000018401	smfn	87	70.870	ENSCGRG00001019814	-	97	70.870	Cricetulus_griseus_chok1gshd
ENSPNYG00000018401	smfn	73	78.646	ENSCGRG00001013673	-	94	78.646	Cricetulus_griseus_chok1gshd
ENSPNYG00000018401	smfn	73	77.083	ENSCGRG00001010922	-	94	77.083	Cricetulus_griseus_chok1gshd
ENSPNYG00000018401	smfn	87	70.870	ENSCGRG00000006235	Rexo2	97	70.870	Cricetulus_griseus_crigri
ENSPNYG00000018401	smfn	96	66.423	ENSCSEG00000007214	smfn	99	66.788	Cynoglossus_semilaevis
ENSPNYG00000018401	smfn	67	59.184	ENSCVAG00000012022	-	96	51.695	Cyprinodon_variegatus
ENSPNYG00000018401	smfn	65	88.166	ENSCVAG00000012008	smfn	91	88.166	Cyprinodon_variegatus
ENSPNYG00000018401	smfn	74	79.688	ENSDARG00000009806	smfn	74	79.688	Danio_rerio
ENSPNYG00000018401	smfn	71	76.963	ENSDNOG00000046533	REXO2	91	76.963	Dasypus_novemcinctus
ENSPNYG00000018401	smfn	76	78.109	ENSDORG00000011255	Rexo2	85	78.109	Dipodomys_ordii
ENSPNYG00000018401	smfn	78	58.621	ENSDORG00000025142	-	92	59.048	Dipodomys_ordii
ENSPNYG00000018401	smfn	74	51.042	FBgn0039115	CG10214	91	51.042	Drosophila_melanogaster
ENSPNYG00000018401	smfn	78	68.966	ENSEBUG00000013964	REXO2	70	68.966	Eptatretus_burgeri
ENSPNYG00000018401	smfn	76	77.612	ENSEASG00005006674	REXO2	85	77.612	Equus_asinus_asinus
ENSPNYG00000018401	smfn	76	77.612	ENSECAG00000005988	REXO2	85	77.612	Equus_caballus
ENSPNYG00000018401	smfn	76	77.889	ENSELUG00000020072	smfn	69	77.889	Esox_lucius
ENSPNYG00000018401	smfn	86	71.681	ENSFCAG00000018632	REXO2	95	71.681	Felis_catus
ENSPNYG00000018401	smfn	71	78.378	ENSFALG00000010044	REXO2	92	78.378	Ficedula_albicollis
ENSPNYG00000018401	smfn	92	64.979	ENSFDAG00000011764	REXO2	95	71.806	Fukomys_damarensis
ENSPNYG00000018401	smfn	73	79.688	ENSGMOG00000006370	smfn	99	79.688	Gadus_morhua
ENSPNYG00000018401	smfn	74	79.275	ENSGALG00000035980	REXO2	84	79.082	Gallus_gallus
ENSPNYG00000018401	smfn	82	80.000	ENSGAFG00000015349	smfn	77	80.000	Gambusia_affinis
ENSPNYG00000018401	smfn	72	84.946	ENSGACG00000020096	smfn	92	84.946	Gasterosteus_aculeatus
ENSPNYG00000018401	smfn	85	69.231	ENSGAGG00000021126	REXO2	96	69.231	Gopherus_agassizii
ENSPNYG00000018401	smfn	81	73.460	ENSGGOG00000023267	REXO2	98	68.932	Gorilla_gorilla
ENSPNYG00000018401	smfn	96	77.912	ENSHBUG00000020097	REXO2	100	77.912	Haplochromis_burtoni
ENSPNYG00000018401	smfn	82	72.768	ENSHGLG00000013556	REXO2	95	72.768	Heterocephalus_glaber_female
ENSPNYG00000018401	smfn	82	73.214	ENSHGLG00100005257	REXO2	95	73.214	Heterocephalus_glaber_male
ENSPNYG00000018401	smfn	69	83.708	ENSHCOG00000007122	smfn	98	83.708	Hippocampus_comes
ENSPNYG00000018401	smfn	75	81.726	ENSIPUG00000020440	rexo2	76	79.512	Ictalurus_punctatus
ENSPNYG00000018401	smfn	82	73.214	ENSSTOG00000012465	REXO2	95	73.214	Ictidomys_tridecemlineatus
ENSPNYG00000018401	smfn	82	58.824	ENSJJAG00000022605	-	89	58.824	Jaculus_jaculus
ENSPNYG00000018401	smfn	86	72.124	ENSJJAG00000013710	-	95	72.124	Jaculus_jaculus
ENSPNYG00000018401	smfn	75	86.598	ENSKMAG00000016795	smfn	70	86.294	Kryptolebias_marmoratus
ENSPNYG00000018401	smfn	70	83.152	ENSLBEG00000006021	smfn	97	83.152	Labrus_bergylta
ENSPNYG00000018401	smfn	84	63.964	ENSLACG00000018623	REXO2	91	63.964	Latimeria_chalumnae
ENSPNYG00000018401	smfn	76	78.894	ENSLOCG00000002389	smfn	95	78.894	Lepisosteus_oculatus
ENSPNYG00000018401	smfn	73	79.688	ENSLAFG00000012451	REXO2	85	77.612	Loxodonta_africana
ENSPNYG00000018401	smfn	77	74.641	ENSMFAG00000041155	REXO2	95	72.768	Macaca_fascicularis
ENSPNYG00000018401	smfn	77	74.641	ENSMMUG00000012269	REXO2	95	72.768	Macaca_mulatta
ENSPNYG00000018401	smfn	77	74.641	ENSMNEG00000033379	REXO2	95	72.768	Macaca_nemestrina
ENSPNYG00000018401	smfn	77	74.641	ENSMLEG00000036571	REXO2	95	72.768	Mandrillus_leucophaeus
ENSPNYG00000018401	smfn	80	87.981	ENSMAMG00000021209	smfn	75	87.981	Mastacembelus_armatus
ENSPNYG00000018401	smfn	100	99.614	ENSMZEG00005020730	REXO2	100	99.614	Maylandia_zebra
ENSPNYG00000018401	smfn	100	99.614	ENSMZEG00005023224	-	100	99.614	Maylandia_zebra
ENSPNYG00000018401	smfn	61	75.155	ENSMGAG00000003026	REXO2	99	75.155	Meleagris_gallopavo
ENSPNYG00000018401	smfn	87	70.870	ENSMAUG00000014576	Rexo2	97	70.870	Mesocricetus_auratus
ENSPNYG00000018401	smfn	76	78.109	ENSMICG00000010094	REXO2	85	78.109	Microcebus_murinus
ENSPNYG00000018401	smfn	87	70.870	ENSMOCG00000009016	Rexo2	97	70.870	Microtus_ochrogaster
ENSPNYG00000018401	smfn	96	67.293	ENSMMOG00000006430	smfn	99	67.293	Mola_mola
ENSPNYG00000018401	smfn	80	75.000	ENSMODG00000013913	REXO2	92	75.000	Monodelphis_domestica
ENSPNYG00000018401	smfn	86	75.210	ENSMALG00000018130	smfn	68	75.210	Monopterus_albus
ENSPNYG00000018401	smfn	88	69.397	MGP_CAROLIEiJ_G0032166	Rexo2	98	69.397	Mus_caroli
ENSPNYG00000018401	smfn	87	69.565	ENSMUSG00000032026	Rexo2	97	69.565	Mus_musculus
ENSPNYG00000018401	smfn	87	69.565	MGP_PahariEiJ_G0015034	Rexo2	97	69.565	Mus_pahari
ENSPNYG00000018401	smfn	87	69.565	MGP_SPRETEiJ_G0033305	Rexo2	97	69.565	Mus_spretus
ENSPNYG00000018401	smfn	82	72.768	ENSMPUG00000003947	REXO2	95	72.768	Mustela_putorius_furo
ENSPNYG00000018401	smfn	76	77.114	ENSMLUG00000009030	REXO2	85	77.114	Myotis_lucifugus
ENSPNYG00000018401	smfn	74	80.311	ENSNGAG00000008819	Rexo2	94	80.311	Nannospalax_galili
ENSPNYG00000018401	smfn	71	94.022	ENSNBRG00000006529	smfn	98	94.022	Neolamprologus_brichardi
ENSPNYG00000018401	smfn	88	90.000	ENSNBRG00000015319	-	99	90.000	Neolamprologus_brichardi
ENSPNYG00000018401	smfn	81	73.460	ENSNLEG00000029745	REXO2	95	71.681	Nomascus_leucogenys
ENSPNYG00000018401	smfn	76	78.109	ENSMEUG00000011558	REXO2	92	78.109	Notamacropus_eugenii
ENSPNYG00000018401	smfn	69	67.066	ENSODEG00000016046	-	91	67.066	Octodon_degus
ENSPNYG00000018401	smfn	59	64.646	ENSODEG00000009698	-	79	64.078	Octodon_degus
ENSPNYG00000018401	smfn	69	79.558	ENSODEG00000009750	-	96	79.558	Octodon_degus
ENSPNYG00000018401	smfn	89	97.403	ENSONIG00000001954	smfn	100	97.403	Oreochromis_niloticus
ENSPNYG00000018401	smfn	73	78.646	ENSOANG00000001754	REXO2	98	62.656	Ornithorhynchus_anatinus
ENSPNYG00000018401	smfn	76	78.109	ENSOCUG00000004274	REXO2	90	73.214	Oryctolagus_cuniculus
ENSPNYG00000018401	smfn	96	68.526	ENSORLG00000005119	smfn	74	68.526	Oryzias_latipes
ENSPNYG00000018401	smfn	75	82.234	ENSORLG00020010121	smfn	64	82.234	Oryzias_latipes_hni
ENSPNYG00000018401	smfn	76	81.500	ENSORLG00015015699	smfn	65	81.500	Oryzias_latipes_hsok
ENSPNYG00000018401	smfn	78	78.818	ENSOMEG00000016878	REXO2	75	78.818	Oryzias_melastigma
ENSPNYG00000018401	smfn	53	80.435	ENSOMEG00000008940	-	97	80.435	Oryzias_melastigma
ENSPNYG00000018401	smfn	82	71.806	ENSOGAG00000016860	REXO2	95	71.806	Otolemur_garnettii
ENSPNYG00000018401	smfn	74	79.275	ENSOARG00000001040	REXO2	93	77.387	Ovis_aries
ENSPNYG00000018401	smfn	81	73.460	ENSPPAG00000039849	REXO2	95	71.681	Pan_paniscus
ENSPNYG00000018401	smfn	86	71.681	ENSPPRG00000007255	REXO2	95	71.681	Panthera_pardus
ENSPNYG00000018401	smfn	69	79.006	ENSPTIG00000015578	REXO2	96	79.006	Panthera_tigris_altaica
ENSPNYG00000018401	smfn	81	73.460	ENSPTRG00000004306	REXO2	95	71.681	Pan_troglodytes
ENSPNYG00000018401	smfn	77	74.641	ENSPANG00000010675	REXO2	95	72.768	Papio_anubis
ENSPNYG00000018401	smfn	92	67.611	ENSPKIG00000000911	smfn	77	83.108	Paramormyrops_kingsleyae
ENSPNYG00000018401	smfn	84	73.182	ENSPSIG00000005151	REXO2	80	73.182	Pelodiscus_sinensis
ENSPNYG00000018401	smfn	70	81.967	ENSPMGG00000007442	smfn	97	81.967	Periophthalmus_magnuspinnatus
ENSPNYG00000018401	smfn	87	58.621	ENSPEMG00000001421	Rexo2	97	58.621	Peromyscus_maniculatus_bairdii
ENSPNYG00000018401	smfn	80	75.000	ENSPCIG00000011227	REXO2	58	75.000	Phascolarctos_cinereus
ENSPNYG00000018401	smfn	83	80.275	ENSPFOG00000017861	smfn	99	84.000	Poecilia_formosa
ENSPNYG00000018401	smfn	78	76.355	ENSPLAG00000007327	REXO2	77	76.355	Poecilia_latipinna
ENSPNYG00000018401	smfn	83	80.734	ENSPMEG00000017343	smfn	78	80.734	Poecilia_mexicana
ENSPNYG00000018401	smfn	86	78.319	ENSPREG00000016438	smfn	80	78.319	Poecilia_reticulata
ENSPNYG00000018401	smfn	81	73.460	ENSPPYG00000003895	REXO2	95	71.681	Pongo_abelii
ENSPNYG00000018401	smfn	73	79.167	ENSPCAG00000005237	REXO2	85	77.114	Procavia_capensis
ENSPNYG00000018401	smfn	63	80.723	ENSPCOG00000027639	REXO2	85	80.723	Propithecus_coquereli
ENSPNYG00000018401	smfn	76	66.010	ENSPVAG00000005295	REXO2	85	66.010	Pteropus_vampyrus
ENSPNYG00000018401	smfn	93	64.885	ENSPNAG00000005290	smfn	97	65.267	Pygocentrus_nattereri
ENSPNYG00000018401	smfn	87	69.565	ENSRNOG00000018939	Rexo2	97	69.565	Rattus_norvegicus
ENSPNYG00000018401	smfn	77	74.641	ENSRBIG00000037809	REXO2	95	72.768	Rhinopithecus_bieti
ENSPNYG00000018401	smfn	77	74.641	ENSRROG00000038928	REXO2	95	72.768	Rhinopithecus_roxellana
ENSPNYG00000018401	smfn	90	38.272	YLR059C	REX2	75	42.574	Saccharomyces_cerevisiae
ENSPNYG00000018401	smfn	92	64.979	ENSSBOG00000028651	REXO2	95	71.806	Saimiri_boliviensis_boliviensis
ENSPNYG00000018401	smfn	80	74.537	ENSSHAG00000008008	REXO2	92	74.537	Sarcophilus_harrisii
ENSPNYG00000018401	smfn	69	80.663	ENSSFOG00015022414	smfn	96	80.663	Scleropages_formosus
ENSPNYG00000018401	smfn	95	69.231	ENSSMAG00000003168	smfn	99	69.231	Scophthalmus_maximus
ENSPNYG00000018401	smfn	83	79.654	ENSSDUG00000015624	smfn	81	79.654	Seriola_dumerili
ENSPNYG00000018401	smfn	83	79.039	ENSSLDG00000014005	smfn	81	79.039	Seriola_lalandi_dorsalis
ENSPNYG00000018401	smfn	60	70.253	ENSSPUG00000006005	REXO2	85	70.253	Sphenodon_punctatus
ENSPNYG00000018401	smfn	70	89.130	ENSSPAG00000001530	smfn	99	89.130	Stegastes_partitus
ENSPNYG00000018401	smfn	92	64.979	ENSSSCG00000015056	REXO2	95	71.681	Sus_scrofa
ENSPNYG00000018401	smfn	75	78.462	ENSTGUG00000000121	REXO2	97	70.690	Taeniopygia_guttata
ENSPNYG00000018401	smfn	78	82.178	ENSTRUG00000021529	smfn	75	82.178	Takifugu_rubripes
ENSPNYG00000018401	smfn	79	79.630	ENSTNIG00000008588	smfn	100	76.068	Tetraodon_nigroviridis
ENSPNYG00000018401	smfn	86	72.124	ENSTBEG00000017040	REXO2	95	72.124	Tupaia_belangeri
ENSPNYG00000018401	smfn	78	72.477	ENSTTRG00000014928	REXO2	99	64.557	Tursiops_truncatus
ENSPNYG00000018401	smfn	82	67.411	ENSUAMG00000019096	REXO2	97	74.074	Ursus_americanus
ENSPNYG00000018401	smfn	82	72.768	ENSUMAG00000003770	REXO2	95	72.768	Ursus_maritimus
ENSPNYG00000018401	smfn	64	62.048	ENSVPAG00000006301	REXO2	96	60.221	Vicugna_pacos
ENSPNYG00000018401	smfn	76	77.612	ENSVVUG00000025223	REXO2	85	77.612	Vulpes_vulpes
ENSPNYG00000018401	smfn	79	75.355	ENSXETG00000012648	rexo2	95	70.259	Xenopus_tropicalis
ENSPNYG00000018401	smfn	74	79.793	ENSXCOG00000018838	smfn	95	82.258	Xiphophorus_couchianus
ENSPNYG00000018401	smfn	97	66.065	ENSXMAG00000021125	smfn	89	66.065	Xiphophorus_maculatus