EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018422 (Gene tree)
Gene ID: 102203597
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 4044 bases
Position: chrJH419221.1:4270653-4274696
Accession: 102203597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024391	zf-C2H2	PF00096.26	2.9e-25	1	5
ENSPNYP00000024391	zf-C2H2	PF00096.26	2.9e-25	2	5
ENSPNYP00000024391	zf-C2H2	PF00096.26	2.9e-25	3	5
ENSPNYP00000024391	zf-C2H2	PF00096.26	2.9e-25	4	5
ENSPNYP00000024391	zf-C2H2	PF00096.26	2.9e-25	5	5
ENSPNYP00000024391	zf-met	PF12874.7	1.3e-07	1	2
ENSPNYP00000024391	zf-met	PF12874.7	1.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000024991	-	960	XM_005725604	ENSPNYP00000024391	319 (aa)	XP_005725661	-

Gene Model

Click here to download ENSPNYG00000018422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018422	gfi1b	54	38.462	ENSPNYG00000023088	-	73	36.932
ENSPNYG00000018422	gfi1b	60	41.916	ENSPNYG00000023637	-	72	41.916
ENSPNYG00000018422	gfi1b	52	42.405	ENSPNYG00000003834	-	75	42.405
ENSPNYG00000018422	gfi1b	71	43.885	ENSPNYG00000018360	-	85	43.885
ENSPNYG00000018422	gfi1b	67	42.683	ENSPNYG00000005945	-	73	42.683
ENSPNYG00000018422	gfi1b	53	42.690	ENSPNYG00000003762	-	88	42.690
ENSPNYG00000018422	gfi1b	79	43.609	ENSPNYG00000022271	znf319b	91	43.609
ENSPNYG00000018422	gfi1b	65	34.454	ENSPNYG00000002412	zbtb41	55	34.454
ENSPNYG00000018422	gfi1b	85	41.975	ENSPNYG00000011987	-	94	42.143
ENSPNYG00000018422	gfi1b	85	46.875	ENSPNYG00000002684	-	98	46.875
ENSPNYG00000018422	gfi1b	52	44.048	ENSPNYG00000010647	-	92	44.048
ENSPNYG00000018422	gfi1b	61	48.125	ENSPNYG00000019368	-	80	48.125
ENSPNYG00000018422	gfi1b	88	43.103	ENSPNYG00000000726	-	85	43.624
ENSPNYG00000018422	gfi1b	55	39.726	ENSPNYG00000024243	-	92	39.726
ENSPNYG00000018422	gfi1b	71	39.073	ENSPNYG00000024244	-	88	39.073
ENSPNYG00000018422	gfi1b	63	45.000	ENSPNYG00000019396	-	95	45.000
ENSPNYG00000018422	gfi1b	56	42.105	ENSPNYG00000008664	-	86	42.105
ENSPNYG00000018422	gfi1b	52	40.252	ENSPNYG00000019549	-	95	40.252
ENSPNYG00000018422	gfi1b	55	41.463	ENSPNYG00000012194	prdm5	73	41.463
ENSPNYG00000018422	gfi1b	52	47.423	ENSPNYG00000003744	-	91	47.423
ENSPNYG00000018422	gfi1b	55	42.143	ENSPNYG00000010637	-	81	42.143
ENSPNYG00000018422	gfi1b	70	40.625	ENSPNYG00000016563	-	98	40.625
ENSPNYG00000018422	gfi1b	52	44.715	ENSPNYG00000001254	-	78	44.715
ENSPNYG00000018422	gfi1b	91	39.873	ENSPNYG00000015514	zbtb16b	59	39.873
ENSPNYG00000018422	gfi1b	55	36.697	ENSPNYG00000012188	-	80	36.697
ENSPNYG00000018422	gfi1b	61	47.887	ENSPNYG00000017141	-	79	45.588
ENSPNYG00000018422	gfi1b	70	46.875	ENSPNYG00000018920	-	87	46.250
ENSPNYG00000018422	gfi1b	52	42.073	ENSPNYG00000007597	-	99	41.875
ENSPNYG00000018422	gfi1b	51	47.619	ENSPNYG00000007552	-	89	47.619
ENSPNYG00000018422	gfi1b	50	45.378	ENSPNYG00000023764	-	51	45.378
ENSPNYG00000018422	gfi1b	52	47.917	ENSPNYG00000005755	-	76	47.917
ENSPNYG00000018422	gfi1b	50	44.186	ENSPNYG00000000700	-	51	44.186
ENSPNYG00000018422	gfi1b	59	39.286	ENSPNYG00000021571	-	85	39.286
ENSPNYG00000018422	gfi1b	51	41.085	ENSPNYG00000012572	zbtb17	54	35.417
ENSPNYG00000018422	gfi1b	55	39.844	ENSPNYG00000024183	zgc:173577	99	39.844
ENSPNYG00000018422	gfi1b	59	40.268	ENSPNYG00000003392	-	97	41.791
ENSPNYG00000018422	gfi1b	53	44.604	ENSPNYG00000016157	-	51	44.604
ENSPNYG00000018422	gfi1b	55	42.857	ENSPNYG00000001524	ZNF319	89	42.857
ENSPNYG00000018422	gfi1b	51	50.388	ENSPNYG00000018597	-	82	50.388
ENSPNYG00000018422	gfi1b	69	41.250	ENSPNYG00000022330	-	68	41.250
ENSPNYG00000018422	gfi1b	52	46.429	ENSPNYG00000011973	-	84	46.429
ENSPNYG00000018422	gfi1b	80	42.520	ENSPNYG00000002873	-	95	42.520
ENSPNYG00000018422	gfi1b	62	43.382	ENSPNYG00000024192	-	70	43.382
ENSPNYG00000018422	gfi1b	52	79.464	ENSPNYG00000001775	-	88	79.464
ENSPNYG00000018422	gfi1b	61	43.750	ENSPNYG00000023882	-	66	43.750
ENSPNYG00000018422	gfi1b	55	41.781	ENSPNYG00000020699	-	89	41.781
ENSPNYG00000018422	gfi1b	71	41.935	ENSPNYG00000023916	-	99	41.935
ENSPNYG00000018422	gfi1b	85	43.590	ENSPNYG00000020245	-	96	43.590
ENSPNYG00000018422	gfi1b	57	41.667	ENSPNYG00000005671	-	75	41.667
ENSPNYG00000018422	gfi1b	61	36.184	ENSPNYG00000013542	patz1	51	36.184
ENSPNYG00000018422	gfi1b	50	46.875	ENSPNYG00000019241	-	83	45.000
ENSPNYG00000018422	gfi1b	52	38.889	ENSPNYG00000015933	-	85	38.889
ENSPNYG00000018422	gfi1b	70	44.286	ENSPNYG00000022104	-	99	37.179
ENSPNYG00000018422	gfi1b	52	42.105	ENSPNYG00000011024	-	57	42.105
ENSPNYG00000018422	gfi1b	52	47.368	ENSPNYG00000018779	-	92	47.368
ENSPNYG00000018422	gfi1b	52	38.272	ENSPNYG00000010799	-	53	38.272
ENSPNYG00000018422	gfi1b	52	43.609	ENSPNYG00000019325	-	66	43.609
ENSPNYG00000018422	gfi1b	53	46.914	ENSPNYG00000005202	-	98	45.570
ENSPNYG00000018422	gfi1b	50	46.154	ENSPNYG00000002699	-	93	46.154
ENSPNYG00000018422	gfi1b	57	46.875	ENSPNYG00000019503	-	91	46.875
ENSPNYG00000018422	gfi1b	56	45.600	ENSPNYG00000021217	-	77	45.600
ENSPNYG00000018422	gfi1b	55	44.578	ENSPNYG00000022227	-	52	44.578
ENSPNYG00000018422	gfi1b	75	37.647	ENSPNYG00000005777	-	87	37.647
ENSPNYG00000018422	gfi1b	52	43.885	ENSPNYG00000019219	-	66	43.885
ENSPNYG00000018422	gfi1b	72	42.857	ENSPNYG00000015803	-	95	42.857
ENSPNYG00000018422	gfi1b	53	44.304	ENSPNYG00000023848	-	70	44.304
ENSPNYG00000018422	gfi1b	52	41.071	ENSPNYG00000021671	-	84	41.071
ENSPNYG00000018422	gfi1b	70	42.012	ENSPNYG00000020737	-	93	42.012
ENSPNYG00000018422	gfi1b	58	41.860	ENSPNYG00000016610	-	70	41.860
ENSPNYG00000018422	gfi1b	87	39.416	ENSPNYG00000007756	-	87	39.416
ENSPNYG00000018422	gfi1b	50	52.830	ENSPNYG00000006306	-	92	52.830
ENSPNYG00000018422	gfi1b	55	44.375	ENSPNYG00000019187	-	83	43.373
ENSPNYG00000018422	gfi1b	55	36.752	ENSPNYG00000021795	-	61	36.752
ENSPNYG00000018422	gfi1b	68	45.161	ENSPNYG00000012877	znf236	61	45.161
ENSPNYG00000018422	gfi1b	59	50.000	ENSPNYG00000003684	-	96	50.000
ENSPNYG00000018422	gfi1b	82	41.176	ENSPNYG00000017888	-	89	41.176
ENSPNYG00000018422	gfi1b	94	44.375	ENSPNYG00000002862	-	86	44.375
ENSPNYG00000018422	gfi1b	75	43.373	ENSPNYG00000008731	-	90	43.312
ENSPNYG00000018422	gfi1b	55	46.250	ENSPNYG00000019343	-	80	46.250
ENSPNYG00000018422	gfi1b	76	58.947	ENSPNYG00000021183	gfi1ab	72	58.947
ENSPNYG00000018422	gfi1b	55	39.850	ENSPNYG00000009700	-	54	39.850
ENSPNYG00000018422	gfi1b	58	39.655	ENSPNYG00000007781	-	93	40.476
ENSPNYG00000018422	gfi1b	61	44.762	ENSPNYG00000007814	-	96	44.762
ENSPNYG00000018422	gfi1b	86	46.154	ENSPNYG00000018616	-	91	46.154
ENSPNYG00000018422	gfi1b	56	41.611	ENSPNYG00000006847	-	58	41.611
ENSPNYG00000018422	gfi1b	70	42.384	ENSPNYG00000007972	-	86	42.169
ENSPNYG00000018422	gfi1b	52	39.344	ENSPNYG00000020716	-	89	38.931
ENSPNYG00000018422	gfi1b	62	48.062	ENSPNYG00000004923	-	68	48.062
ENSPNYG00000018422	gfi1b	53	45.570	ENSPNYG00000019565	-	97	45.570
ENSPNYG00000018422	gfi1b	52	48.148	ENSPNYG00000023736	-	51	48.148
ENSPNYG00000018422	gfi1b	53	37.956	ENSPNYG00000015217	snai2	57	37.956
ENSPNYG00000018422	gfi1b	54	45.192	ENSPNYG00000019820	-	64	45.192
ENSPNYG00000018422	gfi1b	90	44.526	ENSPNYG00000017980	-	99	44.526
ENSPNYG00000018422	gfi1b	61	40.000	ENSPNYG00000005296	-	91	40.000
ENSPNYG00000018422	gfi1b	52	42.029	ENSPNYG00000015486	-	60	42.029
ENSPNYG00000018422	gfi1b	55	38.750	ENSPNYG00000009360	-	57	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018422	gfi1b	99	77.410	ENSAPOG00000001296	gfi1b	99	77.410	Acanthochromis_polyacanthus
ENSPNYG00000018422	gfi1b	100	75.076	ENSACIG00000002190	gfi1b	100	75.076	Amphilophus_citrinellus
ENSPNYG00000018422	gfi1b	99	77.108	ENSAOCG00000021187	gfi1b	99	77.108	Amphiprion_ocellaris
ENSPNYG00000018422	gfi1b	99	77.711	ENSAPEG00000016196	gfi1b	99	77.711	Amphiprion_percula
ENSPNYG00000018422	gfi1b	100	77.108	ENSATEG00000002534	gfi1b	100	77.108	Anabas_testudineus
ENSPNYG00000018422	gfi1b	100	57.310	ENSAPLG00000003373	GFI1B	100	57.310	Anas_platyrhynchos
ENSPNYG00000018422	gfi1b	100	94.737	ENSACLG00000027053	gfi1b	100	94.737	Astatotilapia_calliptera
ENSPNYG00000018422	gfi1b	100	66.472	ENSAMXG00000037544	GFI1B	100	66.472	Astyanax_mexicanus
ENSPNYG00000018422	gfi1b	70	71.366	ENSCAPG00000010404	GFI1B	70	71.366	Cavia_aperea
ENSPNYG00000018422	gfi1b	70	73.333	ENSCPBG00000021186	GFI1B	65	73.333	Chrysemys_picta_bellii
ENSPNYG00000018422	gfi1b	100	73.252	ENSCSEG00000001315	gfi1b	100	73.252	Cynoglossus_semilaevis
ENSPNYG00000018422	gfi1b	100	72.222	ENSCVAG00000017168	gfi1b	100	72.222	Cyprinodon_variegatus
ENSPNYG00000018422	gfi1b	100	66.372	ENSDARG00000079947	gfi1b	99	82.278	Danio_rerio
ENSPNYG00000018422	gfi1b	64	51.471	ENSEEUG00000012609	-	90	51.471	Erinaceus_europaeus
ENSPNYG00000018422	gfi1b	100	67.257	ENSELUG00000016933	gfi1b	100	67.257	Esox_lucius
ENSPNYG00000018422	gfi1b	100	52.973	ENSFALG00000001479	GFI1B	100	52.973	Ficedula_albicollis
ENSPNYG00000018422	gfi1b	100	75.000	ENSFHEG00000015138	gfi1b	100	75.000	Fundulus_heteroclitus
ENSPNYG00000018422	gfi1b	74	80.658	ENSGMOG00000019123	gfi1b	91	80.658	Gadus_morhua
ENSPNYG00000018422	gfi1b	100	55.394	ENSGALG00000003478	GFI1B	100	55.394	Gallus_gallus
ENSPNYG00000018422	gfi1b	76	86.777	ENSGAFG00000003059	gfi1b	100	86.777	Gambusia_affinis
ENSPNYG00000018422	gfi1b	100	68.908	ENSGACG00000018134	gfi1b	100	68.908	Gasterosteus_aculeatus
ENSPNYG00000018422	gfi1b	100	56.140	ENSGAGG00000021327	GFI1B	100	56.140	Gopherus_agassizii
ENSPNYG00000018422	gfi1b	100	94.737	ENSHBUG00000005451	gfi1b	100	94.737	Haplochromis_burtoni
ENSPNYG00000018422	gfi1b	99	71.827	ENSHCOG00000013713	gfi1b	99	71.827	Hippocampus_comes
ENSPNYG00000018422	gfi1b	100	68.060	ENSIPUG00000012769	gfi1b	100	68.060	Ictalurus_punctatus
ENSPNYG00000018422	gfi1b	76	59.140	ENSJJAG00000016355	Gfi1b	74	59.140	Jaculus_jaculus
ENSPNYG00000018422	gfi1b	100	74.769	ENSKMAG00000016047	gfi1b	100	74.769	Kryptolebias_marmoratus
ENSPNYG00000018422	gfi1b	99	75.455	ENSLBEG00000020297	gfi1b	99	76.061	Labrus_bergylta
ENSPNYG00000018422	gfi1b	100	58.610	ENSLACG00000012207	GFI1B	100	58.610	Latimeria_chalumnae
ENSPNYG00000018422	gfi1b	100	63.636	ENSLOCG00000005750	gfi1b	100	63.636	Lepisosteus_oculatus
ENSPNYG00000018422	gfi1b	100	55.000	ENSLAFG00000022367	GFI1B	100	55.000	Loxodonta_africana
ENSPNYG00000018422	gfi1b	100	78.354	ENSMAMG00000003040	gfi1b	100	78.354	Mastacembelus_armatus
ENSPNYG00000018422	gfi1b	100	94.118	ENSMZEG00005015594	gfi1b	100	94.118	Maylandia_zebra
ENSPNYG00000018422	gfi1b	100	55.685	ENSMGAG00000006129	GFI1B	100	55.685	Meleagris_gallopavo
ENSPNYG00000018422	gfi1b	100	75.988	ENSMMOG00000011764	gfi1b	100	75.988	Mola_mola
ENSPNYG00000018422	gfi1b	99	49.735	ENSMODG00000012600	GFI1B	99	49.735	Monodelphis_domestica
ENSPNYG00000018422	gfi1b	99	75.758	ENSMALG00000004034	gfi1b	99	75.758	Monopterus_albus
ENSPNYG00000018422	gfi1b	100	54.810	ENSNGAG00000003333	Gfi1b	100	54.810	Nannospalax_galili
ENSPNYG00000018422	gfi1b	53	67.407	ENSNBRG00000012376	-	100	67.407	Neolamprologus_brichardi
ENSPNYG00000018422	gfi1b	100	92.401	ENSNBRG00000012391	gfi1b	100	92.401	Neolamprologus_brichardi
ENSPNYG00000018422	gfi1b	100	91.489	ENSONIG00000013011	gfi1b	100	91.489	Oreochromis_niloticus
ENSPNYG00000018422	gfi1b	100	57.143	ENSOANG00000014723	GFI1B	100	57.143	Ornithorhynchus_anatinus
ENSPNYG00000018422	gfi1b	100	55.864	ENSORLG00000014390	GFI1B	96	64.130	Oryzias_latipes
ENSPNYG00000018422	gfi1b	100	70.122	ENSORLG00020003719	GFI1B	100	70.122	Oryzias_latipes_hni
ENSPNYG00000018422	gfi1b	100	69.512	ENSORLG00015017142	gfi1b	100	69.512	Oryzias_latipes_hsok
ENSPNYG00000018422	gfi1b	100	70.000	ENSOMEG00000015149	GFI1B	100	70.000	Oryzias_melastigma
ENSPNYG00000018422	gfi1b	100	56.805	ENSOGAG00000008879	GFI1B	100	56.805	Otolemur_garnettii
ENSPNYG00000018422	gfi1b	100	66.964	ENSPKIG00000007643	gfi1b	100	66.964	Paramormyrops_kingsleyae
ENSPNYG00000018422	gfi1b	87	64.875	ENSPSIG00000012112	GFI1B	78	64.875	Pelodiscus_sinensis
ENSPNYG00000018422	gfi1b	70	82.251	ENSPMGG00000006021	gfi1b	74	83.550	Periophthalmus_magnuspinnatus
ENSPNYG00000018422	gfi1b	70	62.257	ENSPCIG00000019724	GFI1B	71	62.257	Phascolarctos_cinereus
ENSPNYG00000018422	gfi1b	100	74.925	ENSPFOG00000003460	gfi1b	100	74.925	Poecilia_formosa
ENSPNYG00000018422	gfi1b	100	76.596	ENSPLAG00000021960	GFI1B	100	76.596	Poecilia_latipinna
ENSPNYG00000018422	gfi1b	100	74.336	ENSPLAG00000017181	GFI1B	100	74.336	Poecilia_latipinna
ENSPNYG00000018422	gfi1b	100	76.292	ENSPMEG00000001556	GFI1B	100	76.292	Poecilia_mexicana
ENSPNYG00000018422	gfi1b	100	76.292	ENSPMEG00000019220	gfi1b	100	76.292	Poecilia_mexicana
ENSPNYG00000018422	gfi1b	100	75.988	ENSPREG00000021718	gfi1b	100	75.988	Poecilia_reticulata
ENSPNYG00000018422	gfi1b	100	67.560	ENSPNAG00000021118	gfi1b	100	67.560	Pygocentrus_nattereri
ENSPNYG00000018422	gfi1b	99	47.411	ENSSHAG00000006462	GFI1B	99	47.411	Sarcophilus_harrisii
ENSPNYG00000018422	gfi1b	74	65.560	ENSSFOG00015011566	gfi1b	90	59.643	Scleropages_formosus
ENSPNYG00000018422	gfi1b	99	74.613	ENSSMAG00000015181	gfi1b	99	74.613	Scophthalmus_maximus
ENSPNYG00000018422	gfi1b	100	77.879	ENSSDUG00000011604	gfi1b	100	77.879	Seriola_dumerili
ENSPNYG00000018422	gfi1b	100	77.273	ENSSLDG00000013823	gfi1b	100	77.273	Seriola_lalandi_dorsalis
ENSPNYG00000018422	gfi1b	91	52.901	ENSSPUG00000016039	GFI1B	83	52.901	Sphenodon_punctatus
ENSPNYG00000018422	gfi1b	100	75.684	ENSSPAG00000022914	gfi1b	100	75.684	Stegastes_partitus
ENSPNYG00000018422	gfi1b	52	90.351	ENSTGUG00000005282	-	99	90.351	Taeniopygia_guttata
ENSPNYG00000018422	gfi1b	99	73.394	ENSTRUG00000004525	gfi1b	99	73.394	Takifugu_rubripes
ENSPNYG00000018422	gfi1b	99	72.171	ENSTNIG00000003834	gfi1b	99	72.171	Tetraodon_nigroviridis
ENSPNYG00000018422	gfi1b	82	46.545	ENSTBEG00000014459	GFI1B	82	46.545	Tupaia_belangeri
ENSPNYG00000018422	gfi1b	73	72.574	ENSXETG00000006263	gfi1b	99	59.760	Xenopus_tropicalis
ENSPNYG00000018422	gfi1b	100	76.596	ENSXMAG00000027589	gfi1b	100	76.596	Xiphophorus_maculatus