EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018541 (Gene tree)
Gene ID: 102200125
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 4872 bases
Position: chrJH419319.1:209520-214391
Accession: 102200125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024528	RRM_5	PF13893.6	5.5e-12	1	2
ENSPNYP00000024528	RRM_5	PF13893.6	5.5e-12	2	2
ENSPNYP00000024528	RRM_1	PF00076.22	6.2e-29	1	2
ENSPNYP00000024528	RRM_1	PF00076.22	6.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025130	-	4018	XM_005741815	ENSPNYP00000024528	338 (aa)	XP_005741872	UPI00022B0AB5

Gene Model

Click here to download ENSPNYG00000018541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018541	rbm4.3	99	67.236	ENSPNYG00000018564	rbm4.3	99	66.952
ENSPNYG00000018541	rbm4.3	94	50.829	ENSPNYG00000004662	rbm4.1	66	56.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018541	rbm4.3	97	68.437	ENSAPOG00000002991	rbm4.3	96	65.976	Acanthochromis_polyacanthus
ENSPNYG00000018541	rbm4.3	100	89.080	ENSAPOG00000002953	rbm4.3	100	89.080	Acanthochromis_polyacanthus
ENSPNYG00000018541	rbm4.3	100	98.521	ENSACIG00000021311	-	100	98.521	Amphilophus_citrinellus
ENSPNYG00000018541	rbm4.3	97	67.953	ENSACIG00000021295	rbm4.3	96	66.469	Amphilophus_citrinellus
ENSPNYG00000018541	rbm4.3	97	68.343	ENSAOCG00000007992	rbm4.3	99	66.667	Amphiprion_ocellaris
ENSPNYG00000018541	rbm4.3	100	87.896	ENSAOCG00000008015	rbm4.3	100	87.608	Amphiprion_ocellaris
ENSPNYG00000018541	rbm4.3	97	68.343	ENSAPEG00000017288	rbm4.3	99	66.667	Amphiprion_percula
ENSPNYG00000018541	rbm4.3	100	88.761	ENSAPEG00000017324	rbm4.3	100	87.032	Amphiprion_percula
ENSPNYG00000018541	rbm4.3	100	89.049	ENSATEG00000019375	rbm4.3	100	88.761	Anabas_testudineus
ENSPNYG00000018541	rbm4.3	97	70.270	ENSATEG00000019395	rbm4.3	96	68.168	Anabas_testudineus
ENSPNYG00000018541	rbm4.3	100	100.000	ENSACLG00000010620	-	100	100.000	Astatotilapia_calliptera
ENSPNYG00000018541	rbm4.3	99	67.521	ENSACLG00000010642	rbm4.3	99	66.952	Astatotilapia_calliptera
ENSPNYG00000018541	rbm4.3	62	75.829	ENSAMXG00000040224	rbm4.3	82	73.529	Astyanax_mexicanus
ENSPNYG00000018541	rbm4.3	100	81.143	ENSCSEG00000013659	rbm4.3	100	79.714	Cynoglossus_semilaevis
ENSPNYG00000018541	rbm4.3	99	63.324	ENSCVAG00000008502	rbm4.3	99	63.897	Cyprinodon_variegatus
ENSPNYG00000018541	rbm4.3	100	76.023	ENSCVAG00000008508	rbm4.3	100	79.532	Cyprinodon_variegatus
ENSPNYG00000018541	rbm4.3	95	71.893	ENSDARG00000022129	rbm4.3	97	67.742	Danio_rerio
ENSPNYG00000018541	rbm4.3	99	71.714	ENSELUG00000022150	rbm4.3	99	68.768	Esox_lucius
ENSPNYG00000018541	rbm4.3	99	73.926	ENSELUG00000022155	rbm4.3	99	72.206	Esox_lucius
ENSPNYG00000018541	rbm4.3	100	67.614	ENSELUG00000022168	rbm4.3	100	68.661	Esox_lucius
ENSPNYG00000018541	rbm4.3	83	81.004	ENSFHEG00000023137	rbm4.3	84	81.852	Fundulus_heteroclitus
ENSPNYG00000018541	rbm4.3	100	61.648	ENSGAFG00000001935	rbm4.3	100	60.227	Gambusia_affinis
ENSPNYG00000018541	rbm4.3	94	78.082	ENSGACG00000019980	rbm4.3	95	63.050	Gasterosteus_aculeatus
ENSPNYG00000018541	rbm4.3	99	67.806	ENSHBUG00000009051	rbm4.3	99	67.236	Haplochromis_burtoni
ENSPNYG00000018541	rbm4.3	100	100.000	ENSHBUG00000009020	-	100	100.000	Haplochromis_burtoni
ENSPNYG00000018541	rbm4.3	95	72.372	ENSHCOG00000010349	rbm4.3	100	72.159	Hippocampus_comes
ENSPNYG00000018541	rbm4.3	100	67.045	ENSIPUG00000022943	RBM4B	100	67.330	Ictalurus_punctatus
ENSPNYG00000018541	rbm4.3	97	60.534	ENSKMAG00000014541	rbm4.3	95	61.176	Kryptolebias_marmoratus
ENSPNYG00000018541	rbm4.3	100	78.592	ENSKMAG00000017468	rbm4.3	100	75.367	Kryptolebias_marmoratus
ENSPNYG00000018541	rbm4.3	55	74.332	ENSLBEG00000001025	rbm4.3	68	76.667	Labrus_bergylta
ENSPNYG00000018541	rbm4.3	100	84.483	ENSLBEG00000001071	-	100	84.483	Labrus_bergylta
ENSPNYG00000018541	rbm4.3	95	59.834	ENSLOCG00000002755	rbm4.3	100	61.376	Lepisosteus_oculatus
ENSPNYG00000018541	rbm4.3	97	67.359	ENSMAMG00000004701	rbm4.3	96	65.579	Mastacembelus_armatus
ENSPNYG00000018541	rbm4.3	100	88.184	ENSMAMG00000004715	-	84	87.896	Mastacembelus_armatus
ENSPNYG00000018541	rbm4.3	100	95.858	ENSMZEG00005007417	-	100	95.858	Maylandia_zebra
ENSPNYG00000018541	rbm4.3	99	67.521	ENSMZEG00005028540	rbm4.3	99	66.952	Maylandia_zebra
ENSPNYG00000018541	rbm4.3	88	71.141	ENSMZEG00005007441	rbm4.3	78	68.707	Maylandia_zebra
ENSPNYG00000018541	rbm4.3	89	91.060	ENSMZEG00005028537	-	85	91.060	Maylandia_zebra
ENSPNYG00000018541	rbm4.3	97	64.897	ENSMMOG00000012191	rbm4.3	96	64.602	Mola_mola
ENSPNYG00000018541	rbm4.3	93	69.649	ENSMALG00000015014	-	89	65.815	Monopterus_albus
ENSPNYG00000018541	rbm4.3	87	90.169	ENSMALG00000003001	rbm4.3	86	89.761	Monopterus_albus
ENSPNYG00000018541	rbm4.3	98	66.465	ENSMALG00000003032	rbm4.3	93	65.696	Monopterus_albus
ENSPNYG00000018541	rbm4.3	97	67.160	ENSNBRG00000012372	rbm4.3	96	65.089	Neolamprologus_brichardi
ENSPNYG00000018541	rbm4.3	97	67.155	ENSONIG00000018378	rbm4.3	96	65.396	Oreochromis_niloticus
ENSPNYG00000018541	rbm4.3	100	100.000	ENSONIG00000018380	-	100	100.000	Oreochromis_niloticus
ENSPNYG00000018541	rbm4.3	96	57.567	ENSORLG00000024749	rbm4.3	95	52.679	Oryzias_latipes
ENSPNYG00000018541	rbm4.3	100	80.000	ENSORLG00000011589	rbm4.3	100	77.714	Oryzias_latipes
ENSPNYG00000018541	rbm4.3	100	77.429	ENSORLG00000012473	rbm4.3	100	75.714	Oryzias_latipes
ENSPNYG00000018541	rbm4.3	100	79.714	ENSORLG00020012474	rbm4.3	100	77.714	Oryzias_latipes_hni
ENSPNYG00000018541	rbm4.3	99	58.621	ENSORLG00020012482	rbm4.3	99	53.890	Oryzias_latipes_hni
ENSPNYG00000018541	rbm4.3	100	77.429	ENSORLG00020012464	rbm4.3	100	75.714	Oryzias_latipes_hni
ENSPNYG00000018541	rbm4.3	100	77.429	ENSORLG00015013686	rbm4.3	100	75.714	Oryzias_latipes_hsok
ENSPNYG00000018541	rbm4.3	97	58.065	ENSORLG00015013721	rbm4.3	99	53.448	Oryzias_latipes_hsok
ENSPNYG00000018541	rbm4.3	100	78.286	ENSORLG00015013698	rbm4.3	100	78.000	Oryzias_latipes_hsok
ENSPNYG00000018541	rbm4.3	96	59.706	ENSOMEG00000005950	rbm4.3	99	59.026	Oryzias_melastigma
ENSPNYG00000018541	rbm4.3	97	76.991	ENSOMEG00000005929	rbm4.3	100	76.353	Oryzias_melastigma
ENSPNYG00000018541	rbm4.3	100	72.394	ENSOMEG00000005918	rbm4.3	100	72.394	Oryzias_melastigma
ENSPNYG00000018541	rbm4.3	93	71.293	ENSPKIG00000007001	rbm4.3	100	67.429	Paramormyrops_kingsleyae
ENSPNYG00000018541	rbm4.3	99	63.068	ENSPLAG00000006077	rbm4.3	99	61.648	Poecilia_latipinna
ENSPNYG00000018541	rbm4.3	100	74.929	ENSPLAG00000006131	rbm4.3	100	74.929	Poecilia_latipinna
ENSPNYG00000018541	rbm4.3	99	63.248	ENSPMEG00000024260	rbm4.3	99	61.538	Poecilia_mexicana
ENSPNYG00000018541	rbm4.3	100	78.363	ENSPMEG00000024263	rbm4.3	100	81.287	Poecilia_mexicana
ENSPNYG00000018541	rbm4.3	100	74.644	ENSPMEG00000024271	rbm4.3	100	74.644	Poecilia_mexicana
ENSPNYG00000018541	rbm4.3	100	71.264	ENSPREG00000002156	rbm4.3	100	72.126	Poecilia_reticulata
ENSPNYG00000018541	rbm4.3	99	62.817	ENSPREG00000002093	-	99	62.393	Poecilia_reticulata
ENSPNYG00000018541	rbm4.3	100	67.403	ENSPNAG00000013053	rbm4.3	100	66.852	Pygocentrus_nattereri
ENSPNYG00000018541	rbm4.3	100	64.641	ENSSFOG00015015563	rbm4.3	100	64.365	Scleropages_formosus
ENSPNYG00000018541	rbm4.3	97	65.179	ENSSMAG00000013653	rbm4.3	96	60.417	Scophthalmus_maximus
ENSPNYG00000018541	rbm4.3	100	85.303	ENSSMAG00000013644	rbm4.3	100	83.573	Scophthalmus_maximus
ENSPNYG00000018541	rbm4.3	97	67.552	ENSSDUG00000018422	rbm4.3	99	63.610	Seriola_dumerili
ENSPNYG00000018541	rbm4.3	100	88.184	ENSSDUG00000018435	rbm4.3	100	87.896	Seriola_dumerili
ENSPNYG00000018541	rbm4.3	97	66.864	ENSSLDG00000017182	rbm4.3	96	62.426	Seriola_lalandi_dorsalis
ENSPNYG00000018541	rbm4.3	100	88.184	ENSSLDG00000017204	rbm4.3	100	87.896	Seriola_lalandi_dorsalis
ENSPNYG00000018541	rbm4.3	96	65.774	ENSSPAG00000008041	rbm4.3	81	63.095	Stegastes_partitus
ENSPNYG00000018541	rbm4.3	100	87.320	ENSSPAG00000008062	rbm4.3	100	87.032	Stegastes_partitus
ENSPNYG00000018541	rbm4.3	97	62.426	ENSTRUG00000023874	rbm4.3	96	64.897	Takifugu_rubripes
ENSPNYG00000018541	rbm4.3	100	84.241	ENSTRUG00000020901	rbm4.3	100	82.808	Takifugu_rubripes
ENSPNYG00000018541	rbm4.3	100	83.285	ENSTNIG00000005668	rbm4.3	100	82.997	Tetraodon_nigroviridis
ENSPNYG00000018541	rbm4.3	100	79.532	ENSXCOG00000006001	rbm4.3	100	80.117	Xiphophorus_couchianus
ENSPNYG00000018541	rbm4.3	97	62.757	ENSXCOG00000005996	rbm4.3	97	62.647	Xiphophorus_couchianus
ENSPNYG00000018541	rbm4.3	97	62.391	ENSXMAG00000025173	rbm4.3	99	62.108	Xiphophorus_maculatus
ENSPNYG00000018541	rbm4.3	100	79.532	ENSXMAG00000021997	rbm4.3	100	80.117	Xiphophorus_maculatus
ENSPNYG00000018541	rbm4.3	100	74.929	ENSXMAG00000011698	rbm4.3	100	75.783	Xiphophorus_maculatus