EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018564 (Gene tree)
Gene ID: 102200688
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6423 bases
Position: chrJH419319.1:220098-226520
Accession: 102200688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024567	RRM_5	PF13893.6	2.5e-11	1	2
ENSPNYP00000024567	RRM_5	PF13893.6	2.5e-11	2	2
ENSPNYP00000024573	RRM_5	PF13893.6	2.5e-11	1	2
ENSPNYP00000024573	RRM_5	PF13893.6	2.5e-11	2	2
ENSPNYP00000024578	RRM_5	PF13893.6	2.5e-11	1	2
ENSPNYP00000024578	RRM_5	PF13893.6	2.5e-11	2	2
ENSPNYP00000024567	RRM_1	PF00076.22	3e-26	1	2
ENSPNYP00000024567	RRM_1	PF00076.22	3e-26	2	2
ENSPNYP00000024573	RRM_1	PF00076.22	3e-26	1	2
ENSPNYP00000024573	RRM_1	PF00076.22	3e-26	2	2
ENSPNYP00000024578	RRM_1	PF00076.22	3e-26	1	2
ENSPNYP00000024578	RRM_1	PF00076.22	3e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025181	-	2404	XM_005741817	ENSPNYP00000024578	345 (aa)	XP_005741874	UPI0003AF6BA0
ENSPNYT00000025176	-	1908	XM_005741818	ENSPNYP00000024573	345 (aa)	XP_005741875	UPI0003AF6BA0
ENSPNYT00000025170	-	3587	-	ENSPNYP00000024567	345 (aa)	-	UPI0003AF6BA0

Gene Model

Click here to download ENSPNYG00000018564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018564	rbm4.3	86	54.248	ENSPNYG00000004662	rbm4.1	66	54.667
ENSPNYG00000018564	rbm4.3	99	66.952	ENSPNYG00000018541	rbm4.3	99	67.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018564	rbm4.3	100	83.815	ENSAPOG00000002991	rbm4.3	100	83.526	Acanthochromis_polyacanthus
ENSPNYG00000018564	rbm4.3	99	70.655	ENSAPOG00000002953	rbm4.3	99	70.940	Acanthochromis_polyacanthus
ENSPNYG00000018564	rbm4.3	100	91.014	ENSACIG00000021295	rbm4.3	100	91.014	Amphilophus_citrinellus
ENSPNYG00000018564	rbm4.3	99	66.097	ENSACIG00000021311	-	99	66.667	Amphilophus_citrinellus
ENSPNYG00000018564	rbm4.3	100	83.237	ENSAOCG00000007992	rbm4.3	96	84.290	Amphiprion_ocellaris
ENSPNYG00000018564	rbm4.3	99	70.857	ENSAOCG00000008015	rbm4.3	99	70.857	Amphiprion_ocellaris
ENSPNYG00000018564	rbm4.3	100	83.526	ENSAPEG00000017288	rbm4.3	96	84.290	Amphiprion_percula
ENSPNYG00000018564	rbm4.3	99	71.060	ENSAPEG00000017324	rbm4.3	99	70.774	Amphiprion_percula
ENSPNYG00000018564	rbm4.3	100	80.747	ENSATEG00000019395	rbm4.3	100	81.897	Anabas_testudineus
ENSPNYG00000018564	rbm4.3	99	70.000	ENSATEG00000019375	rbm4.3	99	70.000	Anabas_testudineus
ENSPNYG00000018564	rbm4.3	99	66.952	ENSACLG00000010620	-	99	67.236	Astatotilapia_calliptera
ENSPNYG00000018564	rbm4.3	100	98.841	ENSACLG00000010642	rbm4.3	100	98.841	Astatotilapia_calliptera
ENSPNYG00000018564	rbm4.3	52	74.302	ENSAMXG00000040224	rbm4.3	73	73.184	Astyanax_mexicanus
ENSPNYG00000018564	rbm4.3	97	64.348	ENSCSEG00000013659	rbm4.3	97	65.782	Cynoglossus_semilaevis
ENSPNYG00000018564	rbm4.3	96	65.294	ENSCVAG00000008508	rbm4.3	97	65.782	Cyprinodon_variegatus
ENSPNYG00000018564	rbm4.3	100	77.937	ENSCVAG00000008502	rbm4.3	100	78.223	Cyprinodon_variegatus
ENSPNYG00000018564	rbm4.3	94	70.517	ENSDARG00000022129	rbm4.3	97	69.552	Danio_rerio
ENSPNYG00000018564	rbm4.3	97	68.805	ENSELUG00000022168	rbm4.3	97	70.414	Esox_lucius
ENSPNYG00000018564	rbm4.3	97	69.075	ENSELUG00000022155	rbm4.3	97	68.622	Esox_lucius
ENSPNYG00000018564	rbm4.3	97	66.957	ENSELUG00000022150	rbm4.3	97	66.176	Esox_lucius
ENSPNYG00000018564	rbm4.3	79	69.675	ENSFHEG00000023137	rbm4.3	87	69.675	Fundulus_heteroclitus
ENSPNYG00000018564	rbm4.3	100	75.281	ENSFHEG00000023096	rbm4.3	100	76.404	Fundulus_heteroclitus
ENSPNYG00000018564	rbm4.3	63	74.208	ENSGMOG00000004032	rbm4.3	52	76.279	Gadus_morhua
ENSPNYG00000018564	rbm4.3	99	76.000	ENSGAFG00000001935	rbm4.3	99	74.571	Gambusia_affinis
ENSPNYG00000018564	rbm4.3	99	79.909	ENSGACG00000019980	rbm4.3	100	77.208	Gasterosteus_aculeatus
ENSPNYG00000018564	rbm4.3	100	98.551	ENSHBUG00000009051	rbm4.3	100	98.551	Haplochromis_burtoni
ENSPNYG00000018564	rbm4.3	99	66.952	ENSHBUG00000009020	-	99	67.236	Haplochromis_burtoni
ENSPNYG00000018564	rbm4.3	94	66.465	ENSHCOG00000010349	rbm4.3	96	65.579	Hippocampus_comes
ENSPNYG00000018564	rbm4.3	100	66.572	ENSHCOG00000010363	rbm4.3	94	70.623	Hippocampus_comes
ENSPNYG00000018564	rbm4.3	96	65.192	ENSIPUG00000022943	RBM4B	97	65.192	Ictalurus_punctatus
ENSPNYG00000018564	rbm4.3	100	76.353	ENSKMAG00000014541	rbm4.3	100	76.923	Kryptolebias_marmoratus
ENSPNYG00000018564	rbm4.3	97	61.290	ENSKMAG00000017468	rbm4.3	97	62.941	Kryptolebias_marmoratus
ENSPNYG00000018564	rbm4.3	54	83.069	ENSLBEG00000001025	rbm4.3	86	82.540	Labrus_bergylta
ENSPNYG00000018564	rbm4.3	99	67.806	ENSLBEG00000001071	-	99	68.376	Labrus_bergylta
ENSPNYG00000018564	rbm4.3	94	56.198	ENSLOCG00000002755	rbm4.3	97	56.403	Lepisosteus_oculatus
ENSPNYG00000018564	rbm4.3	99	69.429	ENSMAMG00000004715	-	83	69.714	Mastacembelus_armatus
ENSPNYG00000018564	rbm4.3	100	81.844	ENSMAMG00000004701	rbm4.3	100	82.709	Mastacembelus_armatus
ENSPNYG00000018564	rbm4.3	83	62.838	ENSMZEG00005028537	-	83	64.527	Maylandia_zebra
ENSPNYG00000018564	rbm4.3	84	99.656	ENSMZEG00005007441	rbm4.3	79	99.656	Maylandia_zebra
ENSPNYG00000018564	rbm4.3	99	63.248	ENSMZEG00005007417	-	99	63.533	Maylandia_zebra
ENSPNYG00000018564	rbm4.3	100	98.841	ENSMZEG00005028540	rbm4.3	100	98.841	Maylandia_zebra
ENSPNYG00000018564	rbm4.3	100	78.286	ENSMMOG00000012191	rbm4.3	100	78.571	Mola_mola
ENSPNYG00000018564	rbm4.3	90	79.743	ENSMALG00000003032	rbm4.3	95	80.386	Monopterus_albus
ENSPNYG00000018564	rbm4.3	100	79.251	ENSMALG00000015014	-	96	80.060	Monopterus_albus
ENSPNYG00000018564	rbm4.3	84	68.919	ENSMALG00000003001	rbm4.3	87	70.847	Monopterus_albus
ENSPNYG00000018564	rbm4.3	100	97.101	ENSNBRG00000012372	rbm4.3	100	97.101	Neolamprologus_brichardi
ENSPNYG00000018564	rbm4.3	100	95.115	ENSONIG00000018378	rbm4.3	100	95.115	Oreochromis_niloticus
ENSPNYG00000018564	rbm4.3	99	66.952	ENSONIG00000018380	-	99	67.236	Oreochromis_niloticus
ENSPNYG00000018564	rbm4.3	100	69.540	ENSORLG00000024749	rbm4.3	100	69.540	Oryzias_latipes
ENSPNYG00000018564	rbm4.3	96	57.514	ENSORLG00000012473	rbm4.3	97	59.078	Oryzias_latipes
ENSPNYG00000018564	rbm4.3	96	58.480	ENSORLG00000011589	rbm4.3	97	59.538	Oryzias_latipes
ENSPNYG00000018564	rbm4.3	100	67.816	ENSORLG00020012482	rbm4.3	100	68.103	Oryzias_latipes_hni
ENSPNYG00000018564	rbm4.3	96	58.187	ENSORLG00020012474	rbm4.3	97	59.249	Oryzias_latipes_hni
ENSPNYG00000018564	rbm4.3	96	57.514	ENSORLG00020012464	rbm4.3	97	59.078	Oryzias_latipes_hni
ENSPNYG00000018564	rbm4.3	96	57.018	ENSORLG00015013698	rbm4.3	97	59.538	Oryzias_latipes_hsok
ENSPNYG00000018564	rbm4.3	100	68.391	ENSORLG00015013721	rbm4.3	100	68.391	Oryzias_latipes_hsok
ENSPNYG00000018564	rbm4.3	96	57.225	ENSORLG00015013686	rbm4.3	97	58.790	Oryzias_latipes_hsok
ENSPNYG00000018564	rbm4.3	100	72.046	ENSOMEG00000005950	rbm4.3	100	72.622	Oryzias_melastigma
ENSPNYG00000018564	rbm4.3	96	57.849	ENSOMEG00000005929	rbm4.3	97	58.790	Oryzias_melastigma
ENSPNYG00000018564	rbm4.3	97	59.091	ENSOMEG00000005918	rbm4.3	94	60.961	Oryzias_melastigma
ENSPNYG00000018564	rbm4.3	92	66.970	ENSPKIG00000007001	rbm4.3	97	67.164	Paramormyrops_kingsleyae
ENSPNYG00000018564	rbm4.3	97	63.848	ENSPLAG00000006131	rbm4.3	97	64.602	Poecilia_latipinna
ENSPNYG00000018564	rbm4.3	100	80.453	ENSPLAG00000006077	rbm4.3	100	80.170	Poecilia_latipinna
ENSPNYG00000018564	rbm4.3	97	64.035	ENSPMEG00000024271	rbm4.3	97	64.897	Poecilia_mexicana
ENSPNYG00000018564	rbm4.3	100	80.966	ENSPMEG00000024260	rbm4.3	100	80.682	Poecilia_mexicana
ENSPNYG00000018564	rbm4.3	99	65.057	ENSPMEG00000024263	rbm4.3	99	65.341	Poecilia_mexicana
ENSPNYG00000018564	rbm4.3	100	79.545	ENSPREG00000002093	-	100	80.114	Poecilia_reticulata
ENSPNYG00000018564	rbm4.3	97	63.018	ENSPREG00000002156	rbm4.3	97	63.174	Poecilia_reticulata
ENSPNYG00000018564	rbm4.3	97	65.819	ENSPNAG00000013053	rbm4.3	97	66.954	Pygocentrus_nattereri
ENSPNYG00000018564	rbm4.3	97	62.674	ENSSFOG00015015563	rbm4.3	97	62.678	Scleropages_formosus
ENSPNYG00000018564	rbm4.3	99	69.054	ENSSMAG00000013644	rbm4.3	99	69.143	Scophthalmus_maximus
ENSPNYG00000018564	rbm4.3	100	75.072	ENSSMAG00000013653	rbm4.3	100	77.937	Scophthalmus_maximus
ENSPNYG00000018564	rbm4.3	99	69.429	ENSSDUG00000018435	rbm4.3	99	69.429	Seriola_dumerili
ENSPNYG00000018564	rbm4.3	100	82.235	ENSSDUG00000018422	rbm4.3	100	82.235	Seriola_dumerili
ENSPNYG00000018564	rbm4.3	100	81.089	ENSSLDG00000017182	rbm4.3	100	81.089	Seriola_lalandi_dorsalis
ENSPNYG00000018564	rbm4.3	99	69.429	ENSSLDG00000017204	rbm4.3	99	69.429	Seriola_lalandi_dorsalis
ENSPNYG00000018564	rbm4.3	99	68.857	ENSSPAG00000008062	rbm4.3	97	71.131	Stegastes_partitus
ENSPNYG00000018564	rbm4.3	100	83.285	ENSSPAG00000008041	rbm4.3	81	84.802	Stegastes_partitus
ENSPNYG00000018564	rbm4.3	97	67.151	ENSTRUG00000020901	rbm4.3	97	67.456	Takifugu_rubripes
ENSPNYG00000018564	rbm4.3	100	77.143	ENSTRUG00000023874	rbm4.3	100	78.000	Takifugu_rubripes
ENSPNYG00000018564	rbm4.3	97	64.516	ENSTNIG00000005668	rbm4.3	97	65.179	Tetraodon_nigroviridis
ENSPNYG00000018564	rbm4.3	99	64.489	ENSXCOG00000006001	rbm4.3	99	64.489	Xiphophorus_couchianus
ENSPNYG00000018564	rbm4.3	96	80.299	ENSXCOG00000005996	rbm4.3	97	80.597	Xiphophorus_couchianus
ENSPNYG00000018564	rbm4.3	96	80.119	ENSXMAG00000025173	rbm4.3	100	79.830	Xiphophorus_maculatus
ENSPNYG00000018564	rbm4.3	97	64.723	ENSXMAG00000011698	rbm4.3	97	65.487	Xiphophorus_maculatus
ENSPNYG00000018564	rbm4.3	99	64.205	ENSXMAG00000021997	rbm4.3	99	64.205	Xiphophorus_maculatus