EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000018613 (Gene tree)
Gene ID: 102206717
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 3420 bases
Position: chrJH419383.1:63027-66446
Accession: 102206717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000024642	MMR_HSR1	PF01926.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025245	-	683	XM_005746374	ENSPNYP00000024642	206 (aa)	XP_005746431	UPI0003AF9CE0

Gene Model

Click here to download ENSPNYG00000018613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000018613	si:dkey-13a21.4	79	34.146	ENSPNYG00000015851	-	72	34.146
ENSPNYG00000018613	si:dkey-13a21.4	82	33.333	ENSPNYG00000004098	rab11bb	76	33.333
ENSPNYG00000018613	si:dkey-13a21.4	82	33.333	ENSPNYG00000019611	-	76	33.333
ENSPNYG00000018613	si:dkey-13a21.4	79	36.810	ENSPNYG00000012426	rab2a	75	36.810
ENSPNYG00000018613	si:dkey-13a21.4	83	30.994	ENSPNYG00000004845	rabl2	73	30.994
ENSPNYG00000018613	si:dkey-13a21.4	76	33.544	ENSPNYG00000018244	rab11al	71	33.544
ENSPNYG00000018613	si:dkey-13a21.4	78	39.506	ENSPNYG00000007520	-	75	39.506
ENSPNYG00000018613	si:dkey-13a21.4	76	38.365	ENSPNYG00000010325	rab42a	59	38.365
ENSPNYG00000018613	si:dkey-13a21.4	80	34.118	ENSPNYG00000008498	-	72	34.118
ENSPNYG00000018613	si:dkey-13a21.4	81	36.905	ENSPNYG00000009490	si:dkey-16l2.16	97	32.850
ENSPNYG00000018613	si:dkey-13a21.4	85	33.898	ENSPNYG00000000512	rab15	81	33.898
ENSPNYG00000018613	si:dkey-13a21.4	72	38.667	ENSPNYG00000013054	rab33ba	61	38.667
ENSPNYG00000018613	si:dkey-13a21.4	95	35.784	ENSPNYG00000000044	rab33a	83	35.784
ENSPNYG00000018613	si:dkey-13a21.4	83	37.853	ENSPNYG00000007064	rab18a	85	37.853
ENSPNYG00000018613	si:dkey-13a21.4	62	36.434	ENSPNYG00000011135	RAB17	55	36.434
ENSPNYG00000018613	si:dkey-13a21.4	81	52.381	ENSPNYG00000000233	rab9b	76	52.381
ENSPNYG00000018613	si:dkey-13a21.4	78	37.037	ENSPNYG00000010377	rab1ba	79	37.037
ENSPNYG00000018613	si:dkey-13a21.4	80	35.152	ENSPNYG00000019639	rab23	77	34.409
ENSPNYG00000018613	si:dkey-13a21.4	82	37.059	ENSPNYG00000005654	rab12	68	37.059
ENSPNYG00000018613	si:dkey-13a21.4	80	34.337	ENSPNYG00000010491	rab25a	77	34.337
ENSPNYG00000018613	si:dkey-13a21.4	96	50.249	ENSPNYG00000005809	-	97	50.249
ENSPNYG00000018613	si:dkey-13a21.4	78	37.654	ENSPNYG00000015841	-	78	37.654
ENSPNYG00000018613	si:dkey-13a21.4	77	36.250	ENSPNYG00000015774	RAB39B	74	36.250
ENSPNYG00000018613	si:dkey-13a21.4	80	33.133	ENSPNYG00000023681	dnajc27	61	33.133
ENSPNYG00000018613	si:dkey-13a21.4	87	37.989	ENSPNYG00000001751	rab18b	86	37.989
ENSPNYG00000018613	si:dkey-13a21.4	79	30.061	ENSPNYG00000006192	rheb	86	30.061
ENSPNYG00000018613	si:dkey-13a21.4	96	51.232	ENSPNYG00000020409	RAB7A	97	51.232
ENSPNYG00000018613	si:dkey-13a21.4	78	37.654	ENSPNYG00000009172	rab1ab	78	37.654
ENSPNYG00000018613	si:dkey-13a21.4	95	35.500	ENSPNYG00000013288	rab41	92	35.500
ENSPNYG00000018613	si:dkey-13a21.4	87	32.787	ENSPNYG00000017514	rab34a	69	32.787
ENSPNYG00000018613	si:dkey-13a21.4	84	34.286	ENSPNYG00000005326	-	80	34.286
ENSPNYG00000018613	si:dkey-13a21.4	57	33.898	ENSPNYG00000007565	RAP2B	95	34.884
ENSPNYG00000018613	si:dkey-13a21.4	95	36.946	ENSPNYG00000012922	zgc:101559	85	36.946
ENSPNYG00000018613	si:dkey-13a21.4	76	35.802	ENSPNYG00000019276	-	73	35.802
ENSPNYG00000018613	si:dkey-13a21.4	95	33.831	ENSPNYG00000020556	rab6a	94	33.831
ENSPNYG00000018613	si:dkey-13a21.4	85	39.548	ENSPNYG00000009728	rab30	79	39.548
ENSPNYG00000018613	si:dkey-13a21.4	77	32.500	ENSPNYG00000005416	si:ch73-116o1.2	75	32.500
ENSPNYG00000018613	si:dkey-13a21.4	75	35.897	ENSPNYG00000010861	rab6bb	76	35.897
ENSPNYG00000018613	si:dkey-13a21.4	82	37.059	ENSPNYG00000023905	rab12	68	37.059
ENSPNYG00000018613	si:dkey-13a21.4	95	35.714	ENSPNYG00000004681	-	96	35.714
ENSPNYG00000018613	si:dkey-13a21.4	64	41.606	ENSPNYG00000015355	RAB29	66	41.606
ENSPNYG00000018613	si:dkey-13a21.4	85	33.333	ENSPNYG00000022091	RAB15	82	33.333
ENSPNYG00000018613	si:dkey-13a21.4	76	39.873	ENSPNYG00000007156	rab35b	76	39.873
ENSPNYG00000018613	si:dkey-13a21.4	79	50.610	ENSPNYG00000015328	RAB9A	75	50.610
ENSPNYG00000018613	si:dkey-13a21.4	74	30.189	ENSPNYG00000011286	rasl11b	63	30.189
ENSPNYG00000018613	si:dkey-13a21.4	76	37.107	ENSPNYG00000008014	rab32b	73	37.107
ENSPNYG00000018613	si:dkey-13a21.4	79	34.146	ENSPNYG00000010615	rab5c	79	33.146
ENSPNYG00000018613	si:dkey-13a21.4	86	34.078	ENSPNYG00000010612	rab5aa	81	34.078
ENSPNYG00000018613	si:dkey-13a21.4	74	30.323	ENSPNYG00000001744	rhebl1	82	30.323
ENSPNYG00000018613	si:dkey-13a21.4	99	34.762	ENSPNYG00000019963	rab6ba	98	34.762
ENSPNYG00000018613	si:dkey-13a21.4	95	31.250	ENSPNYG00000007314	-	95	31.250
ENSPNYG00000018613	si:dkey-13a21.4	82	33.918	ENSPNYG00000019644	rab11ba	76	33.918
ENSPNYG00000018613	si:dkey-13a21.4	73	37.821	ENSPNYG00000003511	-	90	32.127
ENSPNYG00000018613	si:dkey-13a21.4	93	30.542	ENSPNYG00000017153	rab34b	82	34.000
ENSPNYG00000018613	si:dkey-13a21.4	64	33.333	ENSPNYG00000023810	-	61	33.333
ENSPNYG00000018613	si:dkey-13a21.4	80	34.337	ENSPNYG00000018214	rab25b	78	34.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018613	si:dkey-13a21.4	99	91.667	ENSACIG00000011024	si:dkey-13a21.4	100	91.667	Amphilophus_citrinellus
ENSPNYG00000018613	si:dkey-13a21.4	99	86.765	ENSAOCG00000020491	si:dkey-13a21.4	100	86.765	Amphiprion_ocellaris
ENSPNYG00000018613	si:dkey-13a21.4	100	85.922	ENSAPEG00000023338	si:dkey-13a21.4	93	85.922	Amphiprion_percula
ENSPNYG00000018613	si:dkey-13a21.4	99	84.314	ENSATEG00000014958	si:dkey-13a21.4	100	84.314	Anabas_testudineus
ENSPNYG00000018613	si:dkey-13a21.4	95	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSPNYG00000018613	si:dkey-13a21.4	100	100.000	ENSACLG00000021109	si:dkey-13a21.4	100	100.000	Astatotilapia_calliptera
ENSPNYG00000018613	si:dkey-13a21.4	99	53.738	ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	Astyanax_mexicanus
ENSPNYG00000018613	si:dkey-13a21.4	88	56.284	WBGene00004271	rab-7	100	51.196	Caenorhabditis_elegans
ENSPNYG00000018613	si:dkey-13a21.4	99	85.784	ENSCVAG00000001150	si:dkey-13a21.4	100	85.784	Cyprinodon_variegatus
ENSPNYG00000018613	si:dkey-13a21.4	95	62.564	ENSDARG00000026098	si:dkey-13a21.4	95	62.564	Danio_rerio
ENSPNYG00000018613	si:dkey-13a21.4	86	52.778	ENSDNOG00000043559	-	96	50.000	Dasypus_novemcinctus
ENSPNYG00000018613	si:dkey-13a21.4	99	82.927	ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	Fundulus_heteroclitus
ENSPNYG00000018613	si:dkey-13a21.4	99	82.353	ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	Gambusia_affinis
ENSPNYG00000018613	si:dkey-13a21.4	100	99.515	ENSHBUG00000014023	si:dkey-13a21.4	100	99.515	Haplochromis_burtoni
ENSPNYG00000018613	si:dkey-13a21.4	85	79.545	ENSKMAG00000021039	si:dkey-13a21.4	74	79.545	Kryptolebias_marmoratus
ENSPNYG00000018613	si:dkey-13a21.4	99	84.804	ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	Labrus_bergylta
ENSPNYG00000018613	si:dkey-13a21.4	99	60.194	ENSLOCG00000014749	si:dkey-13a21.4	100	60.194	Lepisosteus_oculatus
ENSPNYG00000018613	si:dkey-13a21.4	85	53.143	ENSLAFG00000028984	-	85	53.143	Loxodonta_africana
ENSPNYG00000018613	si:dkey-13a21.4	99	85.784	ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	Mastacembelus_armatus
ENSPNYG00000018613	si:dkey-13a21.4	100	99.515	ENSMZEG00005010220	si:dkey-13a21.4	100	99.515	Maylandia_zebra
ENSPNYG00000018613	si:dkey-13a21.4	100	97.087	ENSNBRG00000023214	si:dkey-13a21.4	100	97.087	Neolamprologus_brichardi
ENSPNYG00000018613	si:dkey-13a21.4	99	98.039	ENSONIG00000020296	si:dkey-13a21.4	100	98.039	Oreochromis_niloticus
ENSPNYG00000018613	si:dkey-13a21.4	99	80.882	ENSORLG00000025098	si:dkey-13a21.4	100	80.882	Oryzias_latipes
ENSPNYG00000018613	si:dkey-13a21.4	99	80.392	ENSORLG00020019465	si:dkey-13a21.4	100	80.392	Oryzias_latipes_hni
ENSPNYG00000018613	si:dkey-13a21.4	99	80.882	ENSORLG00015015121	si:dkey-13a21.4	100	80.882	Oryzias_latipes_hsok
ENSPNYG00000018613	si:dkey-13a21.4	95	62.944	ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	Paramormyrops_kingsleyae
ENSPNYG00000018613	si:dkey-13a21.4	100	77.184	ENSPMGG00000023170	si:dkey-13a21.4	98	77.184	Periophthalmus_magnuspinnatus
ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	Poecilia_formosa
ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	Poecilia_latipinna
ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	Poecilia_mexicana
ENSPNYG00000018613	si:dkey-13a21.4	99	82.353	ENSPREG00000022241	si:dkey-13a21.4	100	82.353	Poecilia_reticulata
ENSPNYG00000018613	si:dkey-13a21.4	99	44.286	YML001W	YPT7	100	44.286	Saccharomyces_cerevisiae
ENSPNYG00000018613	si:dkey-13a21.4	95	63.265	ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	Scleropages_formosus
ENSPNYG00000018613	si:dkey-13a21.4	100	81.553	ENSSMAG00000013945	si:dkey-13a21.4	100	81.553	Scophthalmus_maximus
ENSPNYG00000018613	si:dkey-13a21.4	99	90.196	ENSSDUG00000019738	si:dkey-13a21.4	100	90.196	Seriola_dumerili
ENSPNYG00000018613	si:dkey-13a21.4	99	89.706	ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	Seriola_lalandi_dorsalis
ENSPNYG00000018613	si:dkey-13a21.4	95	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis