EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000018866 (Gene tree)
Gene ID: 102192077
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 12730 bases
Position: chrJH419433.1:611080-623809
Accession: 102192077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000025015	AARP2CN	PF08142.12	3.8e-33	1	1
ENSPNYP00000025064	AARP2CN	PF08142.12	9.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025680	-	3627	XM_005748738	ENSPNYP00000025064	1208 (aa)	XP_005748795	-
ENSPNYT00000025629	-	1910	-	ENSPNYP00000025015	595 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000018866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018866	bms1	87	66.667	ENSG00000165733	BMS1	97	62.776	Homo_sapiens
ENSPNYG00000018866	bms1	53	86.709	ENSAPOG00000016107	-	85	86.709	Acanthochromis_polyacanthus
ENSPNYG00000018866	bms1	62	91.304	ENSAPOG00000020157	-	98	92.033	Acanthochromis_polyacanthus
ENSPNYG00000018866	bms1	88	79.171	ENSAPOG00000002296	bms1	100	78.850	Acanthochromis_polyacanthus
ENSPNYG00000018866	bms1	99	61.124	ENSAMEG00000016834	BMS1	97	61.611	Ailuropoda_melanoleuca
ENSPNYG00000018866	bms1	100	83.753	ENSACIG00000002588	bms1	100	83.672	Amphilophus_citrinellus
ENSPNYG00000018866	bms1	100	80.421	ENSAOCG00000018088	bms1	100	80.551	Amphiprion_ocellaris
ENSPNYG00000018866	bms1	100	80.813	ENSAPEG00000014673	bms1	100	80.535	Amphiprion_percula
ENSPNYG00000018866	bms1	100	79.919	ENSATEG00000023465	bms1	100	78.652	Anabas_testudineus
ENSPNYG00000018866	bms1	95	61.657	ENSAPLG00000003759	BMS1	86	70.671	Anas_platyrhynchos
ENSPNYG00000018866	bms1	96	65.476	ENSACAG00000004537	-	88	68.631	Anolis_carolinensis
ENSPNYG00000018866	bms1	99	97.797	ENSACLG00000001294	bms1	100	95.997	Astatotilapia_calliptera
ENSPNYG00000018866	bms1	86	72.212	ENSAMXG00000011236	bms1	100	69.865	Astyanax_mexicanus
ENSPNYG00000018866	bms1	86	67.810	ENSBTAG00000012878	BMS1	86	69.318	Bos_taurus
ENSPNYG00000018866	bms1	83	54.912	WBGene00022021	Y61A9LA.10	91	57.576	Caenorhabditis_elegans
ENSPNYG00000018866	bms1	86	67.810	ENSCHIG00000023251	BMS1	86	69.156	Capra_hircus
ENSPNYG00000018866	bms1	99	58.172	ENSCAPG00000008652	BMS1	87	65.209	Cavia_aperea
ENSPNYG00000018866	bms1	99	61.085	ENSCPOG00000000502	BMS1	87	67.747	Cavia_porcellus
ENSPNYG00000018866	bms1	86	52.751	ENSCCAG00000024969	-	86	59.350	Cebus_capucinus
ENSPNYG00000018866	bms1	87	66.667	ENSCATG00000030625	-	97	62.126	Cercocebus_atys
ENSPNYG00000018866	bms1	89	47.965	ENSCATG00000008695	-	77	59.641	Cercocebus_atys
ENSPNYG00000018866	bms1	87	67.052	ENSCSAG00000011118	BMS1	97	62.362	Chlorocebus_sabaeus
ENSPNYG00000018866	bms1	93	67.258	ENSCPBG00000025581	BMS1	86	69.032	Chrysemys_picta_bellii
ENSPNYG00000018866	bms1	82	62.626	ENSCING00000003181	-	94	63.926	Ciona_intestinalis
ENSPNYG00000018866	bms1	54	71.255	ENSCSAVG00000004113	-	94	50.000	Ciona_savignyi
ENSPNYG00000018866	bms1	87	67.630	ENSCANG00000011609	BMS1	97	62.333	Colobus_angolensis_palliatus
ENSPNYG00000018866	bms1	98	61.772	ENSCGRG00001019461	Bms1	88	67.955	Cricetulus_griseus_chok1gshd
ENSPNYG00000018866	bms1	98	61.772	ENSCGRG00000009016	Bms1	88	67.955	Cricetulus_griseus_crigri
ENSPNYG00000018866	bms1	100	75.608	ENSCSEG00000002469	bms1	100	76.048	Cynoglossus_semilaevis
ENSPNYG00000018866	bms1	100	77.641	ENSCVAG00000008371	bms1	100	78.460	Cyprinodon_variegatus
ENSPNYG00000018866	bms1	99	71.913	ENSDARG00000054154	bms1	99	72.172	Danio_rerio
ENSPNYG00000018866	bms1	87	65.835	ENSDORG00000002982	Bms1	97	62.299	Dipodomys_ordii
ENSPNYG00000018866	bms1	88	61.259	FBgn0036686	CG7728	96	63.636	Drosophila_melanogaster
ENSPNYG00000018866	bms1	99	61.849	ENSEASG00005006894	BMS1	97	63.116	Equus_asinus_asinus
ENSPNYG00000018866	bms1	99	62.529	ENSECAG00000001358	BMS1	97	63.037	Equus_caballus
ENSPNYG00000018866	bms1	100	71.694	ENSELUG00000001756	bms1	99	72.877	Esox_lucius
ENSPNYG00000018866	bms1	99	61.835	ENSFCAG00000011220	BMS1	86	68.994	Felis_catus
ENSPNYG00000018866	bms1	94	68.860	ENSFALG00000006882	BMS1	85	69.565	Ficedula_albicollis
ENSPNYG00000018866	bms1	99	62.217	ENSFDAG00000001422	BMS1	87	68.233	Fukomys_damarensis
ENSPNYG00000018866	bms1	100	78.307	ENSFHEG00000003367	bms1	100	78.140	Fundulus_heteroclitus
ENSPNYG00000018866	bms1	99	70.642	ENSGMOG00000000718	bms1	99	70.115	Gadus_morhua
ENSPNYG00000018866	bms1	95	68.921	ENSGALG00000002624	BMS1	86	69.404	Gallus_gallus
ENSPNYG00000018866	bms1	73	87.185	ENSGAFG00000009067	bms1	96	70.745	Gambusia_affinis
ENSPNYG00000018866	bms1	98	79.715	ENSGACG00000015334	bms1	90	79.715	Gasterosteus_aculeatus
ENSPNYG00000018866	bms1	95	69.055	ENSGAGG00000003467	BMS1	97	63.265	Gopherus_agassizii
ENSPNYG00000018866	bms1	97	98.964	ENSHBUG00000022628	bms1	100	95.908	Haplochromis_burtoni
ENSPNYG00000018866	bms1	99	62.490	ENSHGLG00000000477	BMS1	87	68.558	Heterocephalus_glaber_female
ENSPNYG00000018866	bms1	99	62.490	ENSHGLG00100002176	BMS1	87	68.558	Heterocephalus_glaber_male
ENSPNYG00000018866	bms1	99	74.876	ENSHCOG00000017604	bms1	99	76.091	Hippocampus_comes
ENSPNYG00000018866	bms1	99	69.285	ENSIPUG00000017855	bms1	99	69.745	Ictalurus_punctatus
ENSPNYG00000018866	bms1	86	67.500	ENSSTOG00000015063	BMS1	87	68.882	Ictidomys_tridecemlineatus
ENSPNYG00000018866	bms1	86	66.281	ENSJJAG00000017328	Bms1	97	61.231	Jaculus_jaculus
ENSPNYG00000018866	bms1	90	79.035	ENSKMAG00000021982	bms1	97	72.750	Kryptolebias_marmoratus
ENSPNYG00000018866	bms1	100	74.029	ENSLBEG00000028208	bms1	100	75.890	Labrus_bergylta
ENSPNYG00000018866	bms1	87	64.683	ENSLACG00000001600	BMS1	97	58.153	Latimeria_chalumnae
ENSPNYG00000018866	bms1	69	80.292	ENSLOCG00000012914	bms1	97	70.782	Lepisosteus_oculatus
ENSPNYG00000018866	bms1	86	67.248	ENSMFAG00000037771	BMS1	96	67.780	Macaca_fascicularis
ENSPNYG00000018866	bms1	83	64.881	ENSMMUG00000007426	-	84	64.343	Macaca_mulatta
ENSPNYG00000018866	bms1	86	54.280	ENSMLEG00000029084	-	77	58.486	Mandrillus_leucophaeus
ENSPNYG00000018866	bms1	100	78.964	ENSMAMG00000020855	bms1	100	77.778	Mastacembelus_armatus
ENSPNYG00000018866	bms1	99	97.797	ENSMZEG00005005663	bms1	100	95.833	Maylandia_zebra
ENSPNYG00000018866	bms1	95	60.968	ENSMGAG00000001170	BMS1	87	69.243	Meleagris_gallopavo
ENSPNYG00000018866	bms1	98	62.295	ENSMAUG00000002195	Bms1	88	67.955	Mesocricetus_auratus
ENSPNYG00000018866	bms1	90	62.609	ENSMICG00000009977	BMS1	97	61.221	Microcebus_murinus
ENSPNYG00000018866	bms1	90	64.781	ENSMOCG00000002038	Bms1	87	67.690	Microtus_ochrogaster
ENSPNYG00000018866	bms1	100	78.336	ENSMMOG00000000977	bms1	100	77.759	Mola_mola
ENSPNYG00000018866	bms1	99	61.345	ENSMODG00000001177	BMS1	86	70.192	Monodelphis_domestica
ENSPNYG00000018866	bms1	100	78.815	ENSMALG00000009680	bms1	100	78.832	Monopterus_albus
ENSPNYG00000018866	bms1	73	76.441	MGP_CAROLIEiJ_G0028785	-	73	77.836	Mus_caroli
ENSPNYG00000018866	bms1	94	59.135	ENSMUSG00000030138	Bms1	97	60.757	Mus_musculus
ENSPNYG00000018866	bms1	98	60.998	MGP_PahariEiJ_G0022539	Bms1	97	60.945	Mus_pahari
ENSPNYG00000018866	bms1	98	60.924	MGP_SPRETEiJ_G0029816	Bms1	87	66.990	Mus_spretus
ENSPNYG00000018866	bms1	95	68.285	ENSNGAG00000015258	Bms1	81	68.019	Nannospalax_galili
ENSPNYG00000018866	bms1	74	97.743	ENSNBRG00000023627	bms1	99	97.743	Neolamprologus_brichardi
ENSPNYG00000018866	bms1	87	66.795	ENSNLEG00000015791	BMS1	97	60.695	Nomascus_leucogenys
ENSPNYG00000018866	bms1	84	77.317	ENSOPRG00000005195	BMS1	78	79.420	Ochotona_princeps
ENSPNYG00000018866	bms1	87	66.045	ENSODEG00000005554	BMS1	87	68.558	Octodon_degus
ENSPNYG00000018866	bms1	100	93.388	ENSONIG00000007227	bms1	100	91.918	Oreochromis_niloticus
ENSPNYG00000018866	bms1	99	60.369	ENSOANG00000000662	-	87	67.747	Ornithorhynchus_anatinus
ENSPNYG00000018866	bms1	86	68.340	ENSOCUG00000005354	BMS1	97	62.290	Oryctolagus_cuniculus
ENSPNYG00000018866	bms1	99	77.150	ENSORLG00000014655	bms1	99	77.741	Oryzias_latipes
ENSPNYG00000018866	bms1	99	76.284	ENSORLG00020016246	bms1	99	76.591	Oryzias_latipes_hni
ENSPNYG00000018866	bms1	99	77.202	ENSORLG00015014183	bms1	99	77.087	Oryzias_latipes_hsok
ENSPNYG00000018866	bms1	91	78.664	ENSOMEG00000015042	bms1	99	78.087	Oryzias_melastigma
ENSPNYG00000018866	bms1	87	66.541	ENSOGAG00000006511	BMS1	87	68.760	Otolemur_garnettii
ENSPNYG00000018866	bms1	86	67.297	ENSOARG00000003900	BMS1	86	69.318	Ovis_aries
ENSPNYG00000018866	bms1	87	66.859	ENSPPAG00000027837	BMS1	97	59.732	Pan_paniscus
ENSPNYG00000018866	bms1	99	61.931	ENSPPRG00000001311	BMS1	86	68.994	Panthera_pardus
ENSPNYG00000018866	bms1	99	60.913	ENSPTIG00000009652	BMS1	86	67.191	Panthera_tigris_altaica
ENSPNYG00000018866	bms1	87	66.667	ENSPTRG00000002441	BMS1	97	62.697	Pan_troglodytes
ENSPNYG00000018866	bms1	95	75.318	ENSPKIG00000008165	bms1	91	73.244	Paramormyrops_kingsleyae
ENSPNYG00000018866	bms1	92	65.756	ENSPSIG00000006481	BMS1	87	68.058	Pelodiscus_sinensis
ENSPNYG00000018866	bms1	68	88.308	ENSPMGG00000012075	bms1	97	88.354	Periophthalmus_magnuspinnatus
ENSPNYG00000018866	bms1	98	56.593	ENSPEMG00000022467	Bms1	86	67.331	Peromyscus_maniculatus_bairdii
ENSPNYG00000018866	bms1	88	65.607	ENSPCIG00000001339	BMS1	84	74.648	Phascolarctos_cinereus
ENSPNYG00000018866	bms1	95	81.906	ENSPFOG00000015180	bms1	99	76.195	Poecilia_formosa
ENSPNYG00000018866	bms1	90	77.407	ENSPLAG00000007150	bms1	99	74.333	Poecilia_latipinna
ENSPNYG00000018866	bms1	99	77.467	ENSPMEG00000023176	bms1	94	77.787	Poecilia_mexicana
ENSPNYG00000018866	bms1	90	77.695	ENSPREG00000002695	bms1	99	77.961	Poecilia_reticulata
ENSPNYG00000018866	bms1	87	67.052	ENSPPYG00000002836	-	96	56.047	Pongo_abelii
ENSPNYG00000018866	bms1	87	66.730	ENSPCAG00000014528	BMS1	70	76.190	Procavia_capensis
ENSPNYG00000018866	bms1	91	68.522	ENSPNAG00000000676	bms1	97	71.059	Pygocentrus_nattereri
ENSPNYG00000018866	bms1	87	63.514	ENSRROG00000040101	BMS1	97	61.072	Rhinopithecus_roxellana
ENSPNYG00000018866	bms1	69	53.018	YPL217C	-	73	55.301	Saccharomyces_cerevisiae
ENSPNYG00000018866	bms1	90	65.209	ENSSBOG00000035778	BMS1	87	69.156	Saimiri_boliviensis_boliviensis
ENSPNYG00000018866	bms1	89	63.914	ENSSHAG00000005062	BMS1	87	68.982	Sarcophilus_harrisii
ENSPNYG00000018866	bms1	90	70.736	ENSSFOG00015022313	bms1	99	70.968	Scleropages_formosus
ENSPNYG00000018866	bms1	100	77.280	ENSSMAG00000019966	bms1	100	77.520	Scophthalmus_maximus
ENSPNYG00000018866	bms1	100	80.389	ENSSDUG00000016875	bms1	100	80.146	Seriola_dumerili
ENSPNYG00000018866	bms1	91	80.462	ENSSLDG00000015199	bms1	100	80.145	Seriola_lalandi_dorsalis
ENSPNYG00000018866	bms1	62	65.784	ENSSARG00000014407	BMS1	85	65.580	Sorex_araneus
ENSPNYG00000018866	bms1	94	64.737	ENSSPUG00000014454	BMS1	87	68.932	Sphenodon_punctatus
ENSPNYG00000018866	bms1	93	69.952	ENSTGUG00000006302	-	85	69.952	Taeniopygia_guttata
ENSPNYG00000018866	bms1	99	69.136	ENSTRUG00000008028	bms1	99	69.483	Takifugu_rubripes
ENSPNYG00000018866	bms1	96	69.983	ENSTNIG00000006216	bms1	91	72.849	Tetraodon_nigroviridis
ENSPNYG00000018866	bms1	64	72.109	ENSTBEG00000001673	-	63	72.165	Tupaia_belangeri
ENSPNYG00000018866	bms1	93	69.318	ENSTTRG00000007983	BMS1	86	68.831	Tursiops_truncatus
ENSPNYG00000018866	bms1	87	68.242	ENSVVUG00000021305	BMS1	97	63.277	Vulpes_vulpes
ENSPNYG00000018866	bms1	98	61.470	ENSXETG00000008158	bms1	99	61.859	Xenopus_tropicalis
ENSPNYG00000018866	bms1	99	77.044	ENSXCOG00000000506	bms1	95	88.089	Xiphophorus_couchianus
ENSPNYG00000018866	bms1	99	76.727	ENSXMAG00000014236	bms1	99	76.967	Xiphophorus_maculatus