EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000018936 (Gene tree)
Gene ID: 102195097
Gene Symbol: patl1
Alias: fa11d04|wu:fa11d04|zgc:158239
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 12165 bases
Position: chrJH419773.1:40101-52265
Accession: 102195097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000025159	PAT1	PF09770.9	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000025776	-	2076	XM_005754453	ENSPNYP00000025159	691 (aa)	XP_005754510	-

Gene Model

Click here to download ENSPNYG00000018936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000018936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000018936	patl1	96	52.853	ENSG00000166889	PATL1	78	52.870	Homo_sapiens
ENSPNYG00000018936	patl1	99	95.062	ENSAPOG00000021290	patl1	83	95.342	Acanthochromis_polyacanthus
ENSPNYG00000018936	patl1	96	53.153	ENSAMEG00000014215	PATL1	78	53.172	Ailuropoda_melanoleuca
ENSPNYG00000018936	patl1	99	96.285	ENSACIG00000005182	patl1	84	96.273	Amphilophus_citrinellus
ENSPNYG00000018936	patl1	87	95.912	ENSAOCG00000021993	patl1	80	95.912	Amphiprion_ocellaris
ENSPNYG00000018936	patl1	94	95.666	ENSAPEG00000021391	patl1	86	95.652	Amphiprion_percula
ENSPNYG00000018936	patl1	98	94.118	ENSATEG00000002230	patl1	62	94.099	Anabas_testudineus
ENSPNYG00000018936	patl1	99	52.395	ENSACAG00000006607	PATL1	78	52.410	Anolis_carolinensis
ENSPNYG00000018936	patl1	96	52.853	ENSANAG00000023078	PATL1	78	52.870	Aotus_nancymaae
ENSPNYG00000018936	patl1	100	80.727	ENSACLG00000005144	patl1	100	80.727	Astatotilapia_calliptera
ENSPNYG00000018936	patl1	95	88.580	ENSAMXG00000010731	patl1	85	88.820	Astyanax_mexicanus
ENSPNYG00000018936	patl1	97	53.153	ENSBTAG00000005913	PATL1	78	53.172	Bos_taurus
ENSPNYG00000018936	patl1	96	52.853	ENSCJAG00000016192	PATL1	78	52.870	Callithrix_jacchus
ENSPNYG00000018936	patl1	96	53.453	ENSCAFG00000007581	PATL1	78	53.474	Canis_familiaris
ENSPNYG00000018936	patl1	96	53.614	ENSCAFG00020001648	PATL1	79	53.474	Canis_lupus_dingo
ENSPNYG00000018936	patl1	96	51.351	ENSCHIG00000025913	PATL1	78	51.360	Capra_hircus
ENSPNYG00000018936	patl1	97	52.663	ENSTSYG00000012748	PATL1	75	52.679	Carlito_syrichta
ENSPNYG00000018936	patl1	97	50.450	ENSCAPG00000013668	PATL1	69	68.333	Cavia_aperea
ENSPNYG00000018936	patl1	97	50.450	ENSCPOG00000006827	PATL1	68	68.333	Cavia_porcellus
ENSPNYG00000018936	patl1	96	52.853	ENSCCAG00000023759	PATL1	78	52.870	Cebus_capucinus
ENSPNYG00000018936	patl1	96	52.553	ENSCATG00000009629	PATL1	78	52.568	Cercocebus_atys
ENSPNYG00000018936	patl1	95	51.952	ENSCLAG00000003427	PATL1	77	51.964	Chinchilla_lanigera
ENSPNYG00000018936	patl1	82	52.553	ENSCSAG00000006095	PATL1	69	52.866	Chlorocebus_sabaeus
ENSPNYG00000018936	patl1	60	57.576	ENSCHOG00000001611	PATL1	68	57.576	Choloepus_hoffmanni
ENSPNYG00000018936	patl1	96	52.553	ENSCANG00000039197	PATL1	78	52.568	Colobus_angolensis_palliatus
ENSPNYG00000018936	patl1	96	53.153	ENSCGRG00001024927	Patl1	86	53.172	Cricetulus_griseus_chok1gshd
ENSPNYG00000018936	patl1	96	53.153	ENSCGRG00000000461	Patl1	86	53.172	Cricetulus_griseus_crigri
ENSPNYG00000018936	patl1	96	92.308	ENSCSEG00000008261	patl1	79	92.570	Cynoglossus_semilaevis
ENSPNYG00000018936	patl1	93	83.489	ENSCVAG00000006664	patl1	84	83.699	Cyprinodon_variegatus
ENSPNYG00000018936	patl1	100	88.580	ENSDARG00000017423	patl1	85	88.889	Danio_rerio
ENSPNYG00000018936	patl1	91	51.652	ENSDNOG00000038865	PATL1	68	57.447	Dasypus_novemcinctus
ENSPNYG00000018936	patl1	96	51.952	ENSDORG00000000237	Patl1	78	51.964	Dipodomys_ordii
ENSPNYG00000018936	patl1	96	53.153	ENSEASG00005007963	PATL1	82	53.172	Equus_asinus_asinus
ENSPNYG00000018936	patl1	96	53.453	ENSECAG00000011411	PATL1	78	53.474	Equus_caballus
ENSPNYG00000018936	patl1	98	86.687	ENSELUG00000024249	patl1	85	86.646	Esox_lucius
ENSPNYG00000018936	patl1	96	53.153	ENSFCAG00000015573	PATL1	78	53.172	Felis_catus
ENSPNYG00000018936	patl1	99	54.381	ENSFALG00000012150	PATL1	78	54.407	Ficedula_albicollis
ENSPNYG00000018936	patl1	91	52.252	ENSFDAG00000016128	PATL1	78	52.266	Fukomys_damarensis
ENSPNYG00000018936	patl1	51	33.871	ENSFHEG00000009727	patl2	62	34.969	Fundulus_heteroclitus
ENSPNYG00000018936	patl1	99	90.282	ENSFHEG00000017790	patl1	90	90.536	Fundulus_heteroclitus
ENSPNYG00000018936	patl1	96	53.799	ENSGALG00000042641	PATL1	79	53.823	Gallus_gallus
ENSPNYG00000018936	patl1	99	89.506	ENSGAFG00000006508	patl1	90	89.752	Gambusia_affinis
ENSPNYG00000018936	patl1	99	92.476	ENSGACG00000016448	patl1	85	92.453	Gasterosteus_aculeatus
ENSPNYG00000018936	patl1	96	54.054	ENSGAGG00000004461	PATL1	78	54.079	Gopherus_agassizii
ENSPNYG00000018936	patl1	96	53.012	ENSGGOG00000004335	PATL1	80	53.030	Gorilla_gorilla
ENSPNYG00000018936	patl1	100	80.970	ENSHBUG00000005365	patl1	100	80.970	Haplochromis_burtoni
ENSPNYG00000018936	patl1	97	50.450	ENSHGLG00000018173	PATL1	78	50.453	Heterocephalus_glaber_female
ENSPNYG00000018936	patl1	95	50.450	ENSHGLG00100003453	PATL1	77	50.453	Heterocephalus_glaber_male
ENSPNYG00000018936	patl1	100	67.840	ENSHCOG00000001898	patl1	86	90.994	Hippocampus_comes
ENSPNYG00000018936	patl1	95	53.453	ENSSTOG00000013764	PATL1	77	53.474	Ictidomys_tridecemlineatus
ENSPNYG00000018936	patl1	95	51.652	ENSJJAG00000010135	Patl1	77	51.662	Jaculus_jaculus
ENSPNYG00000018936	patl1	96	93.538	ENSKMAG00000020848	patl1	86	93.808	Kryptolebias_marmoratus
ENSPNYG00000018936	patl1	100	95.679	ENSLBEG00000023617	patl1	86	95.963	Labrus_bergylta
ENSPNYG00000018936	patl1	94	60.991	ENSLACG00000004640	PATL1	68	68.750	Latimeria_chalumnae
ENSPNYG00000018936	patl1	96	76.506	ENSLOCG00000000717	patl1	84	76.667	Lepisosteus_oculatus
ENSPNYG00000018936	patl1	96	53.614	ENSLAFG00000015161	PATL1	78	53.333	Loxodonta_africana
ENSPNYG00000018936	patl1	96	52.553	ENSMFAG00000040851	PATL1	78	52.568	Macaca_fascicularis
ENSPNYG00000018936	patl1	96	52.553	ENSMMUG00000017287	PATL1	78	52.568	Macaca_mulatta
ENSPNYG00000018936	patl1	96	52.553	ENSMNEG00000038692	PATL1	78	52.568	Macaca_nemestrina
ENSPNYG00000018936	patl1	96	52.553	ENSMLEG00000030044	PATL1	78	52.568	Mandrillus_leucophaeus
ENSPNYG00000018936	patl1	96	93.827	ENSMAMG00000003950	patl1	84	94.099	Mastacembelus_armatus
ENSPNYG00000018936	patl1	100	80.727	ENSMZEG00005013404	patl1	100	80.727	Maylandia_zebra
ENSPNYG00000018936	patl1	91	53.047	ENSMGAG00000003406	PATL1	77	53.069	Meleagris_gallopavo
ENSPNYG00000018936	patl1	96	46.988	ENSMICG00000004172	PATL1	72	57.071	Microcebus_murinus
ENSPNYG00000018936	patl1	97	53.153	ENSMOCG00000010087	Patl1	78	53.172	Microtus_ochrogaster
ENSPNYG00000018936	patl1	84	73.404	ENSMMOG00000013711	patl1	75	93.333	Mola_mola
ENSPNYG00000018936	patl1	96	54.655	ENSMODG00000020201	PATL1	78	54.683	Monodelphis_domestica
ENSPNYG00000018936	patl1	94	81.579	ENSMALG00000018706	patl1	100	79.532	Monopterus_albus
ENSPNYG00000018936	patl1	96	53.153	MGP_CAROLIEiJ_G0022739	Patl1	78	53.172	Mus_caroli
ENSPNYG00000018936	patl1	96	53.153	ENSMUSG00000046139	Patl1	78	53.172	Mus_musculus
ENSPNYG00000018936	patl1	97	53.153	MGP_PahariEiJ_G0014233	Patl1	78	53.172	Mus_pahari
ENSPNYG00000018936	patl1	96	53.153	MGP_SPRETEiJ_G0023652	Patl1	78	53.172	Mus_spretus
ENSPNYG00000018936	patl1	96	53.153	ENSMPUG00000014607	PATL1	78	53.172	Mustela_putorius_furo
ENSPNYG00000018936	patl1	96	52.252	ENSMLUG00000011169	PATL1	79	52.266	Myotis_lucifugus
ENSPNYG00000018936	patl1	96	51.952	ENSNGAG00000003682	Patl1	78	51.964	Nannospalax_galili
ENSPNYG00000018936	patl1	71	98.788	ENSNBRG00000015372	patl1	75	98.788	Neolamprologus_brichardi
ENSPNYG00000018936	patl1	96	52.711	ENSNLEG00000013081	PATL1	80	52.727	Nomascus_leucogenys
ENSPNYG00000018936	patl1	67	57.047	ENSMEUG00000009391	PATL1	73	56.291	Notamacropus_eugenii
ENSPNYG00000018936	patl1	65	53.153	ENSOPRG00000007963	PATL1	69	53.172	Ochotona_princeps
ENSPNYG00000018936	patl1	80	45.528	ENSODEG00000001792	PATL1	85	45.528	Octodon_degus
ENSPNYG00000018936	patl1	100	79.879	ENSONIG00000004170	patl1	83	99.000	Oreochromis_niloticus
ENSPNYG00000018936	patl1	97	52.853	ENSOCUG00000002156	PATL1	78	52.870	Oryctolagus_cuniculus
ENSPNYG00000018936	patl1	93	86.293	ENSORLG00015022240	patl1	64	86.520	Oryzias_latipes_hsok
ENSPNYG00000018936	patl1	96	52.553	ENSOGAG00000004351	PATL1	78	52.568	Otolemur_garnettii
ENSPNYG00000018936	patl1	95	51.652	ENSOARG00000012005	PATL1	74	51.662	Ovis_aries
ENSPNYG00000018936	patl1	96	52.853	ENSPPAG00000034275	PATL1	80	52.870	Pan_paniscus
ENSPNYG00000018936	patl1	95	53.153	ENSPPRG00000020639	PATL1	77	53.172	Panthera_pardus
ENSPNYG00000018936	patl1	96	53.153	ENSPTIG00000019298	PATL1	78	53.172	Panthera_tigris_altaica
ENSPNYG00000018936	patl1	91	51.701	ENSPTRG00000003697	PATL1	79	51.701	Pan_troglodytes
ENSPNYG00000018936	patl1	96	52.553	ENSPANG00000035620	PATL1	78	52.568	Papio_anubis
ENSPNYG00000018936	patl1	100	88.615	ENSPKIG00000016224	patl1	85	88.854	Paramormyrops_kingsleyae
ENSPNYG00000018936	patl1	97	54.054	ENSPSIG00000016206	PATL1	75	54.079	Pelodiscus_sinensis
ENSPNYG00000018936	patl1	94	91.667	ENSPMGG00000002644	patl1	85	91.925	Periophthalmus_magnuspinnatus
ENSPNYG00000018936	patl1	96	52.553	ENSPEMG00000014215	Patl1	78	52.568	Peromyscus_maniculatus_bairdii
ENSPNYG00000018936	patl1	96	54.054	ENSPCIG00000010852	PATL1	78	54.079	Phascolarctos_cinereus
ENSPNYG00000018936	patl1	100	89.231	ENSPFOG00000007768	patl1	88	89.474	Poecilia_formosa
ENSPNYG00000018936	patl1	99	89.846	ENSPLAG00000018465	patl1	90	90.093	Poecilia_latipinna
ENSPNYG00000018936	patl1	100	89.846	ENSPMEG00000006555	patl1	88	90.093	Poecilia_mexicana
ENSPNYG00000018936	patl1	88	87.083	ENSPREG00000003874	patl1	82	87.764	Poecilia_reticulata
ENSPNYG00000018936	patl1	96	53.153	ENSPPYG00000003230	PATL1	78	53.172	Pongo_abelii
ENSPNYG00000018936	patl1	96	52.853	ENSPCOG00000020770	PATL1	78	52.870	Propithecus_coquereli
ENSPNYG00000018936	patl1	68	51.952	ENSPVAG00000015239	PATL1	75	52.795	Pteropus_vampyrus
ENSPNYG00000018936	patl1	96	89.198	ENSPNAG00000017907	patl1	85	89.441	Pygocentrus_nattereri
ENSPNYG00000018936	patl1	96	52.252	ENSRNOG00000021052	Patl1	78	52.266	Rattus_norvegicus
ENSPNYG00000018936	patl1	96	48.657	ENSRBIG00000032263	PATL1	76	48.649	Rhinopithecus_bieti
ENSPNYG00000018936	patl1	96	52.553	ENSRROG00000032861	PATL1	78	52.568	Rhinopithecus_roxellana
ENSPNYG00000018936	patl1	96	53.153	ENSSBOG00000025195	PATL1	78	53.172	Saimiri_boliviensis_boliviensis
ENSPNYG00000018936	patl1	96	54.354	ENSSHAG00000004309	PATL1	78	54.381	Sarcophilus_harrisii
ENSPNYG00000018936	patl1	96	88.889	ENSSFOG00015009614	patl1	86	89.130	Scleropages_formosus
ENSPNYG00000018936	patl1	100	94.737	ENSSMAG00000009482	patl1	86	94.720	Scophthalmus_maximus
ENSPNYG00000018936	patl1	100	93.498	ENSSDUG00000005362	patl1	79	93.478	Seriola_dumerili
ENSPNYG00000018936	patl1	100	93.189	ENSSLDG00000019146	patl1	79	93.168	Seriola_lalandi_dorsalis
ENSPNYG00000018936	patl1	97	55.556	ENSSPUG00000009453	PATL1	79	56.325	Sphenodon_punctatus
ENSPNYG00000018936	patl1	99	96.605	ENSSPAG00000003187	patl1	89	96.605	Stegastes_partitus
ENSPNYG00000018936	patl1	96	53.153	ENSSSCG00000013124	PATL1	78	53.172	Sus_scrofa
ENSPNYG00000018936	patl1	99	54.848	ENSTGUG00000006222	PATL1	78	54.878	Taeniopygia_guttata
ENSPNYG00000018936	patl1	100	84.520	ENSTRUG00000000709	patl1	85	84.472	Takifugu_rubripes
ENSPNYG00000018936	patl1	85	40.467	ENSTBEG00000000796	PATL1	68	40.557	Tupaia_belangeri
ENSPNYG00000018936	patl1	68	52.903	ENSTTRG00000009389	PATL1	73	52.870	Tursiops_truncatus
ENSPNYG00000018936	patl1	95	53.012	ENSUMAG00000018634	PATL1	77	53.030	Ursus_maritimus
ENSPNYG00000018936	patl1	52	70.732	ENSVPAG00000009224	PATL1	57	70.732	Vicugna_pacos
ENSPNYG00000018936	patl1	96	53.453	ENSVVUG00000016668	PATL1	79	53.474	Vulpes_vulpes
ENSPNYG00000018936	patl1	67	89.831	ENSXCOG00000010808	patl1	82	89.474	Xiphophorus_couchianus
ENSPNYG00000018936	patl1	94	90.123	ENSXMAG00000013834	patl1	85	90.373	Xiphophorus_maculatus