EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000019321 (Gene tree)
Gene ID: 102216144
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5756 bases
Position: chrJH419285.1:2564445-2570200
Accession: 102216144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000025637	Nucleoplasmin	PF03066.15	7.5e-33	1	1
ENSPNYP00000025619	Nucleoplasmin	PF03066.15	3.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000026245	-	2046	XM_005737909	ENSPNYP00000025619	310 (aa)	XP_005737966	UPI0003AFE46A
ENSPNYT00000026267	-	894	-	ENSPNYP00000025637	297 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000019321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000019321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000019321	npm1a	100	77.814	ENSAPOG00000002813	npm1a	99	77.814	Acanthochromis_polyacanthus
ENSPNYG00000019321	npm1a	95	83.784	ENSACIG00000014201	npm1a	100	83.446	Amphilophus_citrinellus
ENSPNYG00000019321	npm1a	90	68.929	ENSAOCG00000004978	npm1a	100	66.786	Amphiprion_ocellaris
ENSPNYG00000019321	npm1a	100	78.135	ENSAPEG00000008594	npm1a	99	77.492	Amphiprion_percula
ENSPNYG00000019321	npm1a	99	77.670	ENSATEG00000008885	npm1a	99	78.641	Anabas_testudineus
ENSPNYG00000019321	npm1a	97	82.450	ENSACLG00000008376	npm1a	96	82.119	Astatotilapia_calliptera
ENSPNYG00000019321	npm1a	98	55.738	ENSAMXG00000010155	npm1a	98	54.902	Astyanax_mexicanus
ENSPNYG00000019321	npm1a	100	59.164	ENSCSEG00000011165	npm1a	89	86.275	Cynoglossus_semilaevis
ENSPNYG00000019321	npm1a	100	69.649	ENSCVAG00000008960	npm1a	99	67.732	Cyprinodon_variegatus
ENSPNYG00000019321	npm1a	98	59.344	ENSDARG00000014329	npm1a	94	71.711	Danio_rerio
ENSPNYG00000019321	npm1a	98	37.082	ENSEBUG00000012753	npm1a	93	34.862	Eptatretus_burgeri
ENSPNYG00000019321	npm1a	100	66.242	ENSELUG00000013705	npm1a	99	65.605	Esox_lucius
ENSPNYG00000019321	npm1a	100	72.204	ENSFHEG00000012496	npm1a	99	71.885	Fundulus_heteroclitus
ENSPNYG00000019321	npm1a	100	66.026	ENSGAFG00000013059	npm1a	99	67.949	Gambusia_affinis
ENSPNYG00000019321	npm1a	99	66.343	ENSGACG00000020319	npm1a	99	66.990	Gasterosteus_aculeatus
ENSPNYG00000019321	npm1a	100	96.825	ENSHBUG00000000776	npm1a	100	96.825	Haplochromis_burtoni
ENSPNYG00000019321	npm1a	99	52.681	ENSHCOG00000001059	npm1a	98	54.259	Hippocampus_comes
ENSPNYG00000019321	npm1a	98	60.450	ENSIPUG00000019452	npm1	98	60.450	Ictalurus_punctatus
ENSPNYG00000019321	npm1a	100	68.590	ENSKMAG00000010709	npm1a	99	65.385	Kryptolebias_marmoratus
ENSPNYG00000019321	npm1a	99	71.935	ENSLBEG00000008793	npm1a	99	71.290	Labrus_bergylta
ENSPNYG00000019321	npm1a	86	54.152	ENSLOCG00000009683	npm1a	99	54.513	Lepisosteus_oculatus
ENSPNYG00000019321	npm1a	99	76.699	ENSMAMG00000009344	npm1a	82	76.375	Mastacembelus_armatus
ENSPNYG00000019321	npm1a	100	97.771	ENSMZEG00005013717	npm1a	100	97.771	Maylandia_zebra
ENSPNYG00000019321	npm1a	95	70.034	ENSMMOG00000007980	npm1a	99	70.707	Mola_mola
ENSPNYG00000019321	npm1a	99	69.231	ENSMALG00000001146	npm1a	99	69.551	Monopterus_albus
ENSPNYG00000019321	npm1a	100	86.859	ENSNBRG00000013172	npm1a	100	88.141	Neolamprologus_brichardi
ENSPNYG00000019321	npm1a	100	85.806	ENSONIG00000001860	npm1a	99	86.452	Oreochromis_niloticus
ENSPNYG00000019321	npm1a	100	71.383	ENSORLG00000010179	npm1a	99	67.524	Oryzias_latipes
ENSPNYG00000019321	npm1a	100	70.096	ENSORLG00020020817	npm1a	99	68.489	Oryzias_latipes_hni
ENSPNYG00000019321	npm1a	100	71.383	ENSORLG00015003439	npm1a	99	67.846	Oryzias_latipes_hsok
ENSPNYG00000019321	npm1a	100	70.096	ENSOMEG00000007083	npm1a	99	69.453	Oryzias_melastigma
ENSPNYG00000019321	npm1a	100	55.096	ENSPKIG00000023943	npm1a	99	55.096	Paramormyrops_kingsleyae
ENSPNYG00000019321	npm1a	100	56.592	ENSPMGG00000011716	npm1a	99	56.913	Periophthalmus_magnuspinnatus
ENSPNYG00000019321	npm1a	100	70.833	ENSPFOG00000019173	npm1a	99	70.192	Poecilia_formosa
ENSPNYG00000019321	npm1a	100	70.064	ENSPLAG00000001093	npm1a	99	68.790	Poecilia_latipinna
ENSPNYG00000019321	npm1a	100	70.833	ENSPMEG00000012523	npm1a	99	70.192	Poecilia_mexicana
ENSPNYG00000019321	npm1a	100	72.026	ENSPREG00000001647	npm1a	99	70.740	Poecilia_reticulata
ENSPNYG00000019321	npm1a	98	59.615	ENSPNAG00000026891	npm1a	98	59.615	Pygocentrus_nattereri
ENSPNYG00000019321	npm1a	100	58.413	ENSSFOG00015007074	npm1a	99	58.730	Scleropages_formosus
ENSPNYG00000019321	npm1a	100	71.656	ENSSMAG00000019090	npm1a	99	72.611	Scophthalmus_maximus
ENSPNYG00000019321	npm1a	100	75.321	ENSSDUG00000015609	npm1a	99	75.962	Seriola_dumerili
ENSPNYG00000019321	npm1a	100	75.641	ENSSLDG00000017849	npm1a	99	76.282	Seriola_lalandi_dorsalis
ENSPNYG00000019321	npm1a	100	67.524	ENSSPAG00000021660	npm1a	99	68.167	Stegastes_partitus
ENSPNYG00000019321	npm1a	100	74.441	ENSTRUG00000024003	npm1a	99	74.441	Takifugu_rubripes
ENSPNYG00000019321	npm1a	100	70.418	ENSTNIG00000010773	npm1a	99	71.061	Tetraodon_nigroviridis
ENSPNYG00000019321	npm1a	99	60.897	ENSXCOG00000005958	npm1a	100	64.430	Xiphophorus_couchianus
ENSPNYG00000019321	npm1a	100	69.427	ENSXMAG00000000396	npm1a	99	69.427	Xiphophorus_maculatus