EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000019872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A2 homolog 1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 4022 bases
Position: chrJH419347.1:413834-417855
Accession: 102197611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000026349	RRM_1	PF00076.22	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000026991	-	444	XM_005744328	ENSPNYP00000026349	147 (aa)	XP_005744385	-

Gene Model

Click here to download ENSPNYG00000019872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000019872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000019872	-	52	32.000	ENSPNYG00000020729	-	77	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000019872	-	70	75.728	ENSACIG00000013907	-	89	75.258	Amphilophus_citrinellus
ENSPNYG00000019872	-	72	66.667	ENSAOCG00000013396	-	79	66.667	Amphiprion_ocellaris
ENSPNYG00000019872	-	78	61.207	ENSAPEG00000003539	-	86	61.207	Amphiprion_percula
ENSPNYG00000019872	-	78	50.000	ENSATEG00000024207	-	86	50.000	Anabas_testudineus
ENSPNYG00000019872	-	96	95.804	ENSACLG00000025617	-	95	95.804	Astatotilapia_calliptera
ENSPNYG00000019872	-	74	44.144	ENSCVAG00000011461	-	92	44.144	Cyprinodon_variegatus
ENSPNYG00000019872	-	70	33.654	ENSDARG00000102450	CU571328.1	81	33.654	Danio_rerio
ENSPNYG00000019872	-	88	51.880	ENSELUG00000014190	RO21	100	51.880	Esox_lucius
ENSPNYG00000019872	-	70	54.369	ENSGMOG00000000626	-	92	54.369	Gadus_morhua
ENSPNYG00000019872	-	96	96.503	ENSHBUG00000002750	-	95	96.503	Haplochromis_burtoni
ENSPNYG00000019872	-	96	58.333	ENSLBEG00000023432	-	91	57.009	Labrus_bergylta
ENSPNYG00000019872	-	96	96.503	ENSMZEG00005013064	-	95	96.503	Maylandia_zebra
ENSPNYG00000019872	-	73	55.556	ENSMMOG00000010899	-	88	55.556	Mola_mola
ENSPNYG00000019872	-	99	91.034	ENSNBRG00000023103	-	100	91.034	Neolamprologus_brichardi
ENSPNYG00000019872	-	85	88.189	ENSONIG00000005302	-	98	88.189	Oreochromis_niloticus
ENSPNYG00000019872	-	96	50.694	ENSORLG00000026996	-	85	50.694	Oryzias_latipes
ENSPNYG00000019872	-	95	51.748	ENSORLG00020020545	-	87	51.748	Oryzias_latipes_hni
ENSPNYG00000019872	-	72	53.271	ENSORLG00015010118	-	69	53.271	Oryzias_latipes_hsok
ENSPNYG00000019872	-	97	50.000	ENSOMEG00000008826	-	88	50.000	Oryzias_melastigma
ENSPNYG00000019872	-	71	56.731	ENSPMGG00000003488	-	89	56.731	Periophthalmus_magnuspinnatus
ENSPNYG00000019872	-	72	61.321	ENSSMAG00000017418	-	79	61.321	Scophthalmus_maximus
ENSPNYG00000019872	-	73	60.748	ENSSDUG00000011905	-	76	60.748	Seriola_dumerili
ENSPNYG00000019872	-	96	59.441	ENSSLDG00000021809	-	95	59.441	Seriola_lalandi_dorsalis
ENSPNYG00000019872	-	71	70.192	ENSSPAG00000004304	-	97	70.192	Stegastes_partitus
ENSPNYG00000019872	-	73	52.778	ENSTRUG00000023389	-	92	52.778	Takifugu_rubripes