EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000019926 (Gene tree)
Gene ID: 102204008
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 68306 bases
Position: chrJH419261.1:405529-473834
Accession: 102204008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000026432	ResIII	PF04851.15	5.3e-07	1	1
ENSPNYP00000026465	ResIII	PF04851.15	5.6e-07	1	1
ENSPNYP00000026503	ResIII	PF04851.15	5.6e-07	1	1
ENSPNYP00000026404	ResIII	PF04851.15	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000027046	-	8587	XM_005733982	ENSPNYP00000026404	1579 (aa)	XP_005734039	UPI0003AFDF0C
ENSPNYT00000027111	-	7961	XM_005733986	ENSPNYP00000026465	1499 (aa)	XP_005734043	-
ENSPNYT00000027149	-	7458	XM_005733985	ENSPNYP00000026503	1507 (aa)	XP_005734042	-
ENSPNYT00000027078	-	8503	XM_005733984	ENSPNYP00000026432	1551 (aa)	XP_005734041	UPI0003AF7706

Gene Model

Click here to download ENSPNYG00000019926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000019926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000019926	si:ch73-63e15.2	64	63.532	ENSPNYG00000004291	sbno1	73	63.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000019926	si:ch73-63e15.2	77	67.915	ENSG00000064932	SBNO2	89	68.027	Homo_sapiens
ENSPNYG00000019926	si:ch73-63e15.2	100	82.896	ENSAPOG00000003185	si:ch73-63e15.2	100	82.152	Acanthochromis_polyacanthus
ENSPNYG00000019926	si:ch73-63e15.2	100	82.896	ENSAOCG00000016581	si:ch73-63e15.2	100	83.410	Amphiprion_ocellaris
ENSPNYG00000019926	si:ch73-63e15.2	100	82.765	ENSAPEG00000008862	si:ch73-63e15.2	100	83.278	Amphiprion_percula
ENSPNYG00000019926	si:ch73-63e15.2	100	77.360	ENSATEG00000023838	si:ch73-63e15.2	99	84.314	Anabas_testudineus
ENSPNYG00000019926	si:ch73-63e15.2	76	71.367	ENSAPLG00000007158	SBNO2	90	71.281	Anas_platyrhynchos
ENSPNYG00000019926	si:ch73-63e15.2	77	68.085	ENSANAG00000026685	SBNO2	90	67.942	Aotus_nancymaae
ENSPNYG00000019926	si:ch73-63e15.2	100	99.807	ENSACLG00000005090	si:ch73-63e15.2	100	99.807	Astatotilapia_calliptera
ENSPNYG00000019926	si:ch73-63e15.2	85	74.561	ENSAMXG00000015881	si:ch73-63e15.2	89	77.687	Astyanax_mexicanus
ENSPNYG00000019926	si:ch73-63e15.2	79	77.861	ENSAMXG00000018868	sbno2a	96	79.442	Astyanax_mexicanus
ENSPNYG00000019926	si:ch73-63e15.2	77	68.691	ENSBTAG00000020780	SBNO2	89	68.537	Bos_taurus
ENSPNYG00000019926	si:ch73-63e15.2	76	69.697	ENSCAFG00000019543	SBNO2	83	69.505	Canis_familiaris
ENSPNYG00000019926	si:ch73-63e15.2	76	69.697	ENSCAFG00020017115	SBNO2	88	69.505	Canis_lupus_dingo
ENSPNYG00000019926	si:ch73-63e15.2	77	68.691	ENSCHIG00000026127	SBNO2	86	69.211	Capra_hircus
ENSPNYG00000019926	si:ch73-63e15.2	75	66.899	ENSCAPG00000005731	SBNO2	94	66.725	Cavia_aperea
ENSPNYG00000019926	si:ch73-63e15.2	76	66.869	ENSCPOG00000007477	SBNO2	86	66.638	Cavia_porcellus
ENSPNYG00000019926	si:ch73-63e15.2	77	67.709	ENSCCAG00000037518	SBNO2	91	67.568	Cebus_capucinus
ENSPNYG00000019926	si:ch73-63e15.2	77	68.282	ENSCATG00000037046	SBNO2	89	68.282	Cercocebus_atys
ENSPNYG00000019926	si:ch73-63e15.2	76	68.412	ENSCLAG00000010178	SBNO2	99	68.412	Chinchilla_lanigera
ENSPNYG00000019926	si:ch73-63e15.2	76	68.658	ENSCSAG00000012317	SBNO2	84	68.398	Chlorocebus_sabaeus
ENSPNYG00000019926	si:ch73-63e15.2	77	69.316	ENSCPBG00000008920	SBNO2	80	82.432	Chrysemys_picta_bellii
ENSPNYG00000019926	si:ch73-63e15.2	73	67.968	ENSCANG00000036745	SBNO2	97	67.968	Colobus_angolensis_palliatus
ENSPNYG00000019926	si:ch73-63e15.2	75	66.667	ENSCGRG00001023960	Sbno2	89	64.740	Cricetulus_griseus_chok1gshd
ENSPNYG00000019926	si:ch73-63e15.2	75	68.174	ENSCGRG00000011984	Sbno2	89	66.172	Cricetulus_griseus_crigri
ENSPNYG00000019926	si:ch73-63e15.2	79	83.151	ENSCSEG00000006856	si:ch73-63e15.2	96	86.347	Cynoglossus_semilaevis
ENSPNYG00000019926	si:ch73-63e15.2	100	77.394	ENSCVAG00000005663	si:ch73-63e15.2	100	77.945	Cyprinodon_variegatus
ENSPNYG00000019926	si:ch73-63e15.2	80	76.866	ENSDARG00000098801	sbno2a	94	74.499	Danio_rerio
ENSPNYG00000019926	si:ch73-63e15.2	100	73.152	ENSDARG00000016188	SBNO2	87	78.960	Danio_rerio
ENSPNYG00000019926	si:ch73-63e15.2	76	69.297	ENSDORG00000002916	Sbno2	85	69.124	Dipodomys_ordii
ENSPNYG00000019926	si:ch73-63e15.2	76	69.384	ENSEASG00005021621	SBNO2	89	68.836	Equus_asinus_asinus
ENSPNYG00000019926	si:ch73-63e15.2	76	69.037	ENSECAG00000011827	SBNO2	89	68.921	Equus_caballus
ENSPNYG00000019926	si:ch73-63e15.2	100	73.082	ENSELUG00000020457	si:ch73-63e15.2	100	72.135	Esox_lucius
ENSPNYG00000019926	si:ch73-63e15.2	77	70.583	ENSFALG00000013988	SBNO2	90	66.980	Ficedula_albicollis
ENSPNYG00000019926	si:ch73-63e15.2	74	66.755	ENSFDAG00000015186	SBNO2	86	67.197	Fukomys_damarensis
ENSPNYG00000019926	si:ch73-63e15.2	100	77.626	ENSFHEG00000022262	si:ch73-63e15.2	100	78.278	Fundulus_heteroclitus
ENSPNYG00000019926	si:ch73-63e15.2	76	86.572	ENSGMOG00000007542	si:ch73-63e15.2	95	86.572	Gadus_morhua
ENSPNYG00000019926	si:ch73-63e15.2	78	70.760	ENSGALG00000037522	SBNO2	86	70.677	Gallus_gallus
ENSPNYG00000019926	si:ch73-63e15.2	78	88.291	ENSGAFG00000004860	si:ch73-63e15.2	92	88.291	Gambusia_affinis
ENSPNYG00000019926	si:ch73-63e15.2	76	87.554	ENSGACG00000013190	si:ch73-63e15.2	96	86.856	Gasterosteus_aculeatus
ENSPNYG00000019926	si:ch73-63e15.2	88	64.689	ENSGAGG00000008348	SBNO2	89	69.764	Gopherus_agassizii
ENSPNYG00000019926	si:ch73-63e15.2	100	99.667	ENSHBUG00000010742	si:ch73-63e15.2	100	99.667	Haplochromis_burtoni
ENSPNYG00000019926	si:ch73-63e15.2	76	68.544	ENSHGLG00000008739	SBNO2	85	68.394	Heterocephalus_glaber_female
ENSPNYG00000019926	si:ch73-63e15.2	76	68.205	ENSHGLG00100005269	SBNO2	99	68.092	Heterocephalus_glaber_male
ENSPNYG00000019926	si:ch73-63e15.2	79	84.020	ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	Hippocampus_comes
ENSPNYG00000019926	si:ch73-63e15.2	78	80.000	ENSIPUG00000000537	si:ch73-63e15.2	92	76.108	Ictalurus_punctatus
ENSPNYG00000019926	si:ch73-63e15.2	99	66.026	ENSIPUG00000019672	sbno2	99	75.749	Ictalurus_punctatus
ENSPNYG00000019926	si:ch73-63e15.2	76	68.951	ENSSTOG00000025832	SBNO2	91	65.468	Ictidomys_tridecemlineatus
ENSPNYG00000019926	si:ch73-63e15.2	76	66.147	ENSJJAG00000017397	Sbno2	91	62.729	Jaculus_jaculus
ENSPNYG00000019926	si:ch73-63e15.2	100	77.756	ENSKMAG00000005541	si:ch73-63e15.2	100	77.888	Kryptolebias_marmoratus
ENSPNYG00000019926	si:ch73-63e15.2	99	78.673	ENSLBEG00000025016	si:ch73-63e15.2	99	86.561	Labrus_bergylta
ENSPNYG00000019926	si:ch73-63e15.2	99	70.107	ENSLOCG00000004643	si:ch73-63e15.2	85	83.478	Lepisosteus_oculatus
ENSPNYG00000019926	si:ch73-63e15.2	76	64.589	ENSLAFG00000008824	SBNO2	89	65.354	Loxodonta_africana
ENSPNYG00000019926	si:ch73-63e15.2	77	66.610	ENSMFAG00000040030	SBNO2	91	66.610	Macaca_fascicularis
ENSPNYG00000019926	si:ch73-63e15.2	76	68.658	ENSMMUG00000010886	SBNO2	88	66.954	Macaca_mulatta
ENSPNYG00000019926	si:ch73-63e15.2	77	68.112	ENSMNEG00000039927	SBNO2	89	68.112	Macaca_nemestrina
ENSPNYG00000019926	si:ch73-63e15.2	70	69.296	ENSMLEG00000038556	SBNO2	98	65.146	Mandrillus_leucophaeus
ENSPNYG00000019926	si:ch73-63e15.2	99	80.039	ENSMAMG00000018758	si:ch73-63e15.2	100	79.896	Mastacembelus_armatus
ENSPNYG00000019926	si:ch73-63e15.2	100	99.810	ENSMZEG00005010682	si:ch73-63e15.2	100	99.810	Maylandia_zebra
ENSPNYG00000019926	si:ch73-63e15.2	77	70.935	ENSMGAG00000003801	SBNO2	91	70.682	Meleagris_gallopavo
ENSPNYG00000019926	si:ch73-63e15.2	76	67.670	ENSMAUG00000008034	Sbno2	86	68.213	Mesocricetus_auratus
ENSPNYG00000019926	si:ch73-63e15.2	77	67.750	ENSMICG00000013071	SBNO2	89	67.894	Microcebus_murinus
ENSPNYG00000019926	si:ch73-63e15.2	76	68.826	ENSMOCG00000010504	Sbno2	89	66.502	Microtus_ochrogaster
ENSPNYG00000019926	si:ch73-63e15.2	76	70.973	ENSMODG00000005382	SBNO2	89	66.510	Monodelphis_domestica
ENSPNYG00000019926	si:ch73-63e15.2	62	83.460	ENSMALG00000021831	si:ch73-63e15.2	99	83.460	Monopterus_albus
ENSPNYG00000019926	si:ch73-63e15.2	76	68.599	ENSMUSG00000035673	Sbno2	97	66.500	Mus_musculus
ENSPNYG00000019926	si:ch73-63e15.2	76	68.685	MGP_PahariEiJ_G0030976	Sbno2	89	66.417	Mus_pahari
ENSPNYG00000019926	si:ch73-63e15.2	76	68.685	MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	Mus_spretus
ENSPNYG00000019926	si:ch73-63e15.2	65	71.400	ENSMPUG00000008747	SBNO2	99	66.758	Mustela_putorius_furo
ENSPNYG00000019926	si:ch73-63e15.2	76	68.166	ENSNGAG00000004308	Sbno2	90	65.868	Nannospalax_galili
ENSPNYG00000019926	si:ch73-63e15.2	81	99.160	ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	Neolamprologus_brichardi
ENSPNYG00000019926	si:ch73-63e15.2	73	68.794	ENSNLEG00000001305	SBNO2	89	68.794	Nomascus_leucogenys
ENSPNYG00000019926	si:ch73-63e15.2	62	67.091	ENSMEUG00000013511	-	78	66.773	Notamacropus_eugenii
ENSPNYG00000019926	si:ch73-63e15.2	75	67.951	ENSOPRG00000017238	SBNO2	93	68.844	Ochotona_princeps
ENSPNYG00000019926	si:ch73-63e15.2	76	67.215	ENSODEG00000011822	SBNO2	86	67.097	Octodon_degus
ENSPNYG00000019926	si:ch73-63e15.2	100	98.065	ENSONIG00000002490	si:ch73-63e15.2	100	97.973	Oreochromis_niloticus
ENSPNYG00000019926	si:ch73-63e15.2	100	78.327	ENSORLG00000000913	si:ch73-63e15.2	100	77.873	Oryzias_latipes
ENSPNYG00000019926	si:ch73-63e15.2	100	78.393	ENSORLG00020010978	si:ch73-63e15.2	100	77.873	Oryzias_latipes_hni
ENSPNYG00000019926	si:ch73-63e15.2	100	78.393	ENSORLG00015000202	si:ch73-63e15.2	100	77.873	Oryzias_latipes_hsok
ENSPNYG00000019926	si:ch73-63e15.2	100	77.814	ENSOMEG00000000359	si:ch73-63e15.2	100	76.802	Oryzias_melastigma
ENSPNYG00000019926	si:ch73-63e15.2	76	66.494	ENSOARG00000011130	SBNO2	86	66.638	Ovis_aries
ENSPNYG00000019926	si:ch73-63e15.2	77	67.004	ENSPPAG00000032482	SBNO2	91	67.116	Pan_paniscus
ENSPNYG00000019926	si:ch73-63e15.2	77	67.915	ENSPTRG00000010185	SBNO2	89	68.027	Pan_troglodytes
ENSPNYG00000019926	si:ch73-63e15.2	77	64.881	ENSPANG00000009658	SBNO2	88	64.626	Papio_anubis
ENSPNYG00000019926	si:ch73-63e15.2	90	82.158	ENSPKIG00000024201	si:ch73-63e15.2	97	82.312	Paramormyrops_kingsleyae
ENSPNYG00000019926	si:ch73-63e15.2	68	78.613	ENSPKIG00000009707	-	84	78.732	Paramormyrops_kingsleyae
ENSPNYG00000019926	si:ch73-63e15.2	64	73.374	ENSPSIG00000002852	SBNO2	99	73.171	Pelodiscus_sinensis
ENSPNYG00000019926	si:ch73-63e15.2	79	81.795	ENSPMGG00000014375	si:ch73-63e15.2	95	78.100	Periophthalmus_magnuspinnatus
ENSPNYG00000019926	si:ch73-63e15.2	76	66.811	ENSPEMG00000024122	Sbno2	89	64.232	Peromyscus_maniculatus_bairdii
ENSPNYG00000019926	si:ch73-63e15.2	76	70.664	ENSPCIG00000011264	SBNO2	89	67.205	Phascolarctos_cinereus
ENSPNYG00000019926	si:ch73-63e15.2	100	76.658	ENSPFOG00000004096	si:ch73-63e15.2	100	85.739	Poecilia_formosa
ENSPNYG00000019926	si:ch73-63e15.2	100	76.658	ENSPLAG00000014653	si:ch73-63e15.2	100	76.908	Poecilia_latipinna
ENSPNYG00000019926	si:ch73-63e15.2	100	76.321	ENSPMEG00000002129	si:ch73-63e15.2	96	82.621	Poecilia_mexicana
ENSPNYG00000019926	si:ch73-63e15.2	100	76.528	ENSPREG00000006755	si:ch73-63e15.2	100	75.802	Poecilia_reticulata
ENSPNYG00000019926	si:ch73-63e15.2	70	68.627	ENSPCAG00000012256	SBNO2	79	68.037	Procavia_capensis
ENSPNYG00000019926	si:ch73-63e15.2	77	62.415	ENSPCOG00000015216	SBNO2	89	62.277	Propithecus_coquereli
ENSPNYG00000019926	si:ch73-63e15.2	77	79.417	ENSPNAG00000026609	sbno2a	97	75.082	Pygocentrus_nattereri
ENSPNYG00000019926	si:ch73-63e15.2	81	79.352	ENSPNAG00000020260	si:ch73-63e15.2	89	79.028	Pygocentrus_nattereri
ENSPNYG00000019926	si:ch73-63e15.2	76	68.772	ENSRNOG00000013987	Sbno2	90	67.863	Rattus_norvegicus
ENSPNYG00000019926	si:ch73-63e15.2	71	66.759	ENSRBIG00000009740	SBNO2	88	66.026	Rhinopithecus_bieti
ENSPNYG00000019926	si:ch73-63e15.2	67	70.498	ENSRROG00000044671	SBNO2	87	70.142	Rhinopithecus_roxellana
ENSPNYG00000019926	si:ch73-63e15.2	77	67.660	ENSSBOG00000023562	SBNO2	90	67.517	Saimiri_boliviensis_boliviensis
ENSPNYG00000019926	si:ch73-63e15.2	75	70.942	ENSSHAG00000010241	SBNO2	98	70.496	Sarcophilus_harrisii
ENSPNYG00000019926	si:ch73-63e15.2	92	78.676	ENSSFOG00015005861	si:ch73-63e15.2	96	80.304	Scleropages_formosus
ENSPNYG00000019926	si:ch73-63e15.2	99	79.793	ENSSMAG00000012489	si:ch73-63e15.2	100	80.543	Scophthalmus_maximus
ENSPNYG00000019926	si:ch73-63e15.2	99	81.560	ENSSDUG00000003527	si:ch73-63e15.2	100	81.625	Seriola_dumerili
ENSPNYG00000019926	si:ch73-63e15.2	99	81.431	ENSSLDG00000004623	si:ch73-63e15.2	100	81.496	Seriola_lalandi_dorsalis
ENSPNYG00000019926	si:ch73-63e15.2	99	82.295	ENSSPAG00000017717	si:ch73-63e15.2	100	82.657	Stegastes_partitus
ENSPNYG00000019926	si:ch73-63e15.2	77	68.559	ENSSSCG00000030042	SBNO2	90	68.659	Sus_scrofa
ENSPNYG00000019926	si:ch73-63e15.2	74	87.895	ENSTRUG00000018193	si:ch73-63e15.2	86	88.381	Takifugu_rubripes
ENSPNYG00000019926	si:ch73-63e15.2	69	69.943	ENSUAMG00000006568	SBNO2	93	70.983	Ursus_americanus
ENSPNYG00000019926	si:ch73-63e15.2	76	69.697	ENSVVUG00000022823	SBNO2	82	69.505	Vulpes_vulpes
ENSPNYG00000019926	si:ch73-63e15.2	69	74.899	ENSXETG00000021579	sbno2	91	74.239	Xenopus_tropicalis
ENSPNYG00000019926	si:ch73-63e15.2	88	84.751	ENSXCOG00000009209	si:ch73-63e15.2	94	89.749	Xiphophorus_couchianus
ENSPNYG00000019926	si:ch73-63e15.2	100	76.678	ENSXMAG00000012091	si:ch73-63e15.2	89	88.605	Xiphophorus_maculatus