EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000019993 (Gene tree)
Gene ID: 102193055
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5065 bases
Position: chrJH419470.1:135340-140404
Accession: 102193055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000026512	PPR	PF01535.20	5.5e-17	1	2
ENSPNYP00000026512	PPR	PF01535.20	5.5e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000027158	-	2464	XM_005750188	ENSPNYP00000026512	708 (aa)	XP_005750245	UPI0003AFA4A3

Gene Model

Click here to download ENSPNYG00000019993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000019993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000019993	ptcd1	80	48.805	ENSG00000106246	PTCD1	83	48.893	Homo_sapiens
ENSPNYG00000019993	ptcd1	80	48.805	ENSG00000248919	ATP5MF-PTCD1	78	48.893	Homo_sapiens
ENSPNYG00000019993	ptcd1	88	67.767	ENSAPOG00000010679	ptcd1	96	67.767	Acanthochromis_polyacanthus
ENSPNYG00000019993	ptcd1	80	51.771	ENSAMEG00000006224	-	77	51.771	Ailuropoda_melanoleuca
ENSPNYG00000019993	ptcd1	92	83.485	ENSACIG00000017861	ptcd1	97	83.485	Amphilophus_citrinellus
ENSPNYG00000019993	ptcd1	99	67.511	ENSAOCG00000020741	-	99	67.511	Amphiprion_ocellaris
ENSPNYG00000019993	ptcd1	88	68.868	ENSAOCG00000022617	ptcd1	94	68.868	Amphiprion_ocellaris
ENSPNYG00000019993	ptcd1	99	67.511	ENSAPEG00000022632	ptcd1	99	67.511	Amphiprion_percula
ENSPNYG00000019993	ptcd1	100	71.049	ENSATEG00000007016	ptcd1	100	71.049	Anabas_testudineus
ENSPNYG00000019993	ptcd1	80	49.406	ENSAPLG00000006862	-	91	49.406	Anas_platyrhynchos
ENSPNYG00000019993	ptcd1	80	50.339	ENSACAG00000012871	-	77	50.339	Anolis_carolinensis
ENSPNYG00000019993	ptcd1	80	48.658	ENSANAG00000035790	-	86	48.744	Aotus_nancymaae
ENSPNYG00000019993	ptcd1	100	97.881	ENSACLG00000002824	ptcd1	100	97.881	Astatotilapia_calliptera
ENSPNYG00000019993	ptcd1	80	51.882	ENSAMXG00000037292	ptcd1	87	50.924	Astyanax_mexicanus
ENSPNYG00000019993	ptcd1	84	47.896	ENSBTAG00000020440	-	75	47.896	Bos_taurus
ENSPNYG00000019993	ptcd1	80	48.393	ENSCJAG00000015815	-	84	48.480	Callithrix_jacchus
ENSPNYG00000019993	ptcd1	83	49.836	ENSCAFG00000015055	-	80	49.836	Canis_familiaris
ENSPNYG00000019993	ptcd1	83	49.755	ENSCAFG00020014480	-	80	49.755	Canis_lupus_dingo
ENSPNYG00000019993	ptcd1	86	48.000	ENSCHIG00000027000	-	87	48.000	Capra_hircus
ENSPNYG00000019993	ptcd1	80	48.087	ENSTSYG00000029495	-	83	48.173	Carlito_syrichta
ENSPNYG00000019993	ptcd1	80	48.398	ENSCAPG00000014660	-	92	47.240	Cavia_aperea
ENSPNYG00000019993	ptcd1	80	49.410	ENSCPOG00000001780	-	86	48.214	Cavia_porcellus
ENSPNYG00000019993	ptcd1	80	48.567	ENSCCAG00000034025	-	84	48.653	Cebus_capucinus
ENSPNYG00000019993	ptcd1	80	47.973	ENSCATG00000040859	-	83	48.061	Cercocebus_atys
ENSPNYG00000019993	ptcd1	84	47.458	ENSCLAG00000006354	-	88	47.567	Chinchilla_lanigera
ENSPNYG00000019993	ptcd1	76	48.214	ENSCSAG00000017794	-	82	48.307	Chlorocebus_sabaeus
ENSPNYG00000019993	ptcd1	86	45.551	ENSCPBG00000020866	-	89	45.701	Chrysemys_picta_bellii
ENSPNYG00000019993	ptcd1	82	48.435	ENSCANG00000023441	-	86	49.259	Colobus_angolensis_palliatus
ENSPNYG00000019993	ptcd1	82	49.175	ENSCGRG00001023686	Ptcd1	85	49.670	Cricetulus_griseus_chok1gshd
ENSPNYG00000019993	ptcd1	82	49.175	ENSCGRG00000015031	Ptcd1	84	49.670	Cricetulus_griseus_crigri
ENSPNYG00000019993	ptcd1	98	58.020	ENSCSEG00000002378	ptcd1	99	58.333	Cynoglossus_semilaevis
ENSPNYG00000019993	ptcd1	99	68.310	ENSCVAG00000015826	ptcd1	99	68.310	Cyprinodon_variegatus
ENSPNYG00000019993	ptcd1	93	68.684	ENSCVAG00000003621	ptcd1	98	68.684	Cyprinodon_variegatus
ENSPNYG00000019993	ptcd1	84	52.033	ENSDARG00000076176	ptcd1	88	52.033	Danio_rerio
ENSPNYG00000019993	ptcd1	80	48.896	ENSDNOG00000009957	-	85	48.440	Dasypus_novemcinctus
ENSPNYG00000019993	ptcd1	80	49.069	ENSDORG00000000740	Ptcd1	86	48.833	Dipodomys_ordii
ENSPNYG00000019993	ptcd1	80	39.841	ENSEBUG00000014515	ptcd1	94	39.606	Eptatretus_burgeri
ENSPNYG00000019993	ptcd1	80	50.756	ENSEASG00005002480	-	83	51.174	Equus_asinus_asinus
ENSPNYG00000019993	ptcd1	80	49.500	ENSECAG00000016617	-	83	49.917	Equus_caballus
ENSPNYG00000019993	ptcd1	80	59.504	ENSELUG00000016517	ptcd1	81	59.504	Esox_lucius
ENSPNYG00000019993	ptcd1	80	50.085	ENSFCAG00000015069	-	83	50.085	Felis_catus
ENSPNYG00000019993	ptcd1	83	46.677	ENSFALG00000013803	-	87	46.445	Ficedula_albicollis
ENSPNYG00000019993	ptcd1	80	49.073	ENSFDAG00000006393	-	85	48.764	Fukomys_damarensis
ENSPNYG00000019993	ptcd1	77	74.457	ENSFHEG00000012491	ptcd1	96	74.457	Fundulus_heteroclitus
ENSPNYG00000019993	ptcd1	87	62.739	ENSGMOG00000007639	ptcd1	99	62.739	Gadus_morhua
ENSPNYG00000019993	ptcd1	83	46.044	ENSGALG00000004711	-	83	47.351	Gallus_gallus
ENSPNYG00000019993	ptcd1	88	69.778	ENSGAFG00000013175	ptcd1	90	70.447	Gambusia_affinis
ENSPNYG00000019993	ptcd1	89	70.312	ENSGACG00000016607	ptcd1	99	70.312	Gasterosteus_aculeatus
ENSPNYG00000019993	ptcd1	77	47.527	ENSGAGG00000021832	-	85	46.769	Gopherus_agassizii
ENSPNYG00000019993	ptcd1	80	47.973	ENSGGOG00000015123	-	83	48.061	Gorilla_gorilla
ENSPNYG00000019993	ptcd1	100	98.446	ENSHBUG00000018275	ptcd1	100	98.446	Haplochromis_burtoni
ENSPNYG00000019993	ptcd1	82	48.197	ENSHGLG00000017621	-	88	46.904	Heterocephalus_glaber_female
ENSPNYG00000019993	ptcd1	82	48.197	ENSHGLG00100007218	-	88	46.904	Heterocephalus_glaber_male
ENSPNYG00000019993	ptcd1	98	57.532	ENSHCOG00000010784	ptcd1	98	58.106	Hippocampus_comes
ENSPNYG00000019993	ptcd1	84	49.349	ENSSTOG00000001682	-	86	49.349	Ictidomys_tridecemlineatus
ENSPNYG00000019993	ptcd1	83	48.856	ENSJJAG00000000319	Ptcd1	87	49.589	Jaculus_jaculus
ENSPNYG00000019993	ptcd1	99	66.856	ENSKMAG00000008708	ptcd1	99	66.856	Kryptolebias_marmoratus
ENSPNYG00000019993	ptcd1	99	66.667	ENSLBEG00000008061	ptcd1	99	67.080	Labrus_bergylta
ENSPNYG00000019993	ptcd1	80	50.254	ENSLACG00000011172	ptcd1	82	50.254	Latimeria_chalumnae
ENSPNYG00000019993	ptcd1	83	51.752	ENSLOCG00000004833	ptcd1	94	51.575	Lepisosteus_oculatus
ENSPNYG00000019993	ptcd1	82	48.684	ENSLAFG00000002588	-	85	48.684	Loxodonta_africana
ENSPNYG00000019993	ptcd1	80	47.973	ENSMFAG00000041324	-	83	48.061	Macaca_fascicularis
ENSPNYG00000019993	ptcd1	80	47.973	ENSMMUG00000030408	-	83	48.061	Macaca_mulatta
ENSPNYG00000019993	ptcd1	80	48.142	ENSMNEG00000043786	-	83	48.229	Macaca_nemestrina
ENSPNYG00000019993	ptcd1	80	35.788	ENSMLEG00000031179	-	81	42.169	Mandrillus_leucophaeus
ENSPNYG00000019993	ptcd1	99	68.436	ENSMAMG00000007623	ptcd1	98	68.436	Mastacembelus_armatus
ENSPNYG00000019993	ptcd1	100	97.599	ENSMZEG00005012722	ptcd1	100	97.599	Maylandia_zebra
ENSPNYG00000019993	ptcd1	87	45.685	ENSMGAG00000004211	-	86	45.982	Meleagris_gallopavo
ENSPNYG00000019993	ptcd1	83	46.016	ENSMICG00000017428	-	87	46.191	Microcebus_murinus
ENSPNYG00000019993	ptcd1	99	68.966	ENSMMOG00000020243	ptcd1	99	68.966	Mola_mola
ENSPNYG00000019993	ptcd1	84	45.912	ENSMODG00000001350	-	85	45.912	Monodelphis_domestica
ENSPNYG00000019993	ptcd1	99	70.874	ENSMALG00000018442	ptcd1	99	70.874	Monopterus_albus
ENSPNYG00000019993	ptcd1	85	47.125	MGP_CAROLIEiJ_G0028011	Ptcd1	89	48.392	Mus_caroli
ENSPNYG00000019993	ptcd1	85	48.083	ENSMUSG00000029624	Ptcd1	89	48.562	Mus_musculus
ENSPNYG00000019993	ptcd1	84	48.465	MGP_PahariEiJ_G0024580	Ptcd1	88	47.981	Mus_pahari
ENSPNYG00000019993	ptcd1	85	47.284	MGP_SPRETEiJ_G0029012	Ptcd1	89	48.243	Mus_spretus
ENSPNYG00000019993	ptcd1	85	47.520	ENSMPUG00000016518	-	88	48.000	Mustela_putorius_furo
ENSPNYG00000019993	ptcd1	80	50.251	ENSMLUG00000010994	-	78	50.334	Myotis_lucifugus
ENSPNYG00000019993	ptcd1	98	93.094	ENSNBRG00000010079	ptcd1	96	95.764	Neolamprologus_brichardi
ENSPNYG00000019993	ptcd1	70	47.228	ENSNLEG00000011060	-	87	47.228	Nomascus_leucogenys
ENSPNYG00000019993	ptcd1	80	47.119	ENSMEUG00000006930	-	84	47.119	Notamacropus_eugenii
ENSPNYG00000019993	ptcd1	70	59.483	ENSOPRG00000013647	-	73	62.069	Ochotona_princeps
ENSPNYG00000019993	ptcd1	85	91.653	ENSONIG00000003168	ptcd1	100	91.653	Oreochromis_niloticus
ENSPNYG00000019993	ptcd1	76	47.703	ENSOANG00000007728	-	73	47.703	Ornithorhynchus_anatinus
ENSPNYG00000019993	ptcd1	85	47.778	ENSOCUG00000010584	-	86	47.785	Oryctolagus_cuniculus
ENSPNYG00000019993	ptcd1	96	66.861	ENSORLG00000009275	ptcd1	99	66.861	Oryzias_latipes
ENSPNYG00000019993	ptcd1	96	67.789	ENSORLG00020000988	ptcd1	99	67.789	Oryzias_latipes_hni
ENSPNYG00000019993	ptcd1	96	67.737	ENSORLG00015010557	ptcd1	99	67.737	Oryzias_latipes_hsok
ENSPNYG00000019993	ptcd1	96	68.282	ENSOMEG00000020627	ptcd1	99	68.282	Oryzias_melastigma
ENSPNYG00000019993	ptcd1	87	45.597	ENSOGAG00000010877	-	89	45.912	Otolemur_garnettii
ENSPNYG00000019993	ptcd1	86	45.016	ENSOARG00000018676	-	88	45.016	Ovis_aries
ENSPNYG00000019993	ptcd1	80	47.804	ENSPPAG00000036024	-	83	47.892	Pan_paniscus
ENSPNYG00000019993	ptcd1	80	50.254	ENSPPRG00000003478	-	84	50.254	Panthera_pardus
ENSPNYG00000019993	ptcd1	84	46.602	ENSPTRG00000019452	-	87	46.688	Pan_troglodytes
ENSPNYG00000019993	ptcd1	80	48.142	ENSPANG00000016730	-	83	48.229	Papio_anubis
ENSPNYG00000019993	ptcd1	80	51.706	ENSPKIG00000014215	ptcd1	84	52.151	Paramormyrops_kingsleyae
ENSPNYG00000019993	ptcd1	80	47.885	ENSPSIG00000011184	-	98	48.054	Pelodiscus_sinensis
ENSPNYG00000019993	ptcd1	70	42.775	ENSPMAG00000009667	ptcd1	100	42.775	Petromyzon_marinus
ENSPNYG00000019993	ptcd1	84	46.372	ENSPCIG00000024778	-	85	46.372	Phascolarctos_cinereus
ENSPNYG00000019993	ptcd1	91	68.293	ENSPFOG00000004458	ptcd1	92	68.293	Poecilia_formosa
ENSPNYG00000019993	ptcd1	91	68.453	ENSPLAG00000011051	ptcd1	92	68.606	Poecilia_latipinna
ENSPNYG00000019993	ptcd1	91	68.950	ENSPMEG00000020547	ptcd1	92	68.950	Poecilia_mexicana
ENSPNYG00000019993	ptcd1	89	69.291	ENSPREG00000000059	ptcd1	90	69.764	Poecilia_reticulata
ENSPNYG00000019993	ptcd1	80	47.563	ENSPPYG00000017377	-	88	47.563	Pongo_abelii
ENSPNYG00000019993	ptcd1	75	54.000	ENSPCAG00000001852	-	83	54.000	Procavia_capensis
ENSPNYG00000019993	ptcd1	82	47.761	ENSPCOG00000018596	-	90	46.822	Propithecus_coquereli
ENSPNYG00000019993	ptcd1	51	58.712	ENSPVAG00000007529	-	55	58.712	Pteropus_vampyrus
ENSPNYG00000019993	ptcd1	81	53.188	ENSPNAG00000014931	ptcd1	89	52.000	Pygocentrus_nattereri
ENSPNYG00000019993	ptcd1	87	46.782	ENSRNOG00000000987	Ptcd1	92	47.319	Rattus_norvegicus
ENSPNYG00000019993	ptcd1	80	48.229	ENSRBIG00000043393	-	83	49.073	Rhinopithecus_bieti
ENSPNYG00000019993	ptcd1	80	48.490	ENSRROG00000036420	-	83	49.329	Rhinopithecus_roxellana
ENSPNYG00000019993	ptcd1	80	48.142	ENSSBOG00000024114	-	84	48.229	Saimiri_boliviensis_boliviensis
ENSPNYG00000019993	ptcd1	84	45.642	ENSSHAG00000011376	-	88	46.755	Sarcophilus_harrisii
ENSPNYG00000019993	ptcd1	84	52.894	ENSSFOG00015007909	ptcd1	83	53.376	Scleropages_formosus
ENSPNYG00000019993	ptcd1	87	68.480	ENSSMAG00000000218	ptcd1	99	68.480	Scophthalmus_maximus
ENSPNYG00000019993	ptcd1	96	72.150	ENSSDUG00000015671	ptcd1	100	72.150	Seriola_dumerili
ENSPNYG00000019993	ptcd1	93	73.054	ENSSLDG00000014261	ptcd1	99	70.674	Seriola_lalandi_dorsalis
ENSPNYG00000019993	ptcd1	87	46.189	ENSSPUG00000003540	-	85	46.189	Sphenodon_punctatus
ENSPNYG00000019993	ptcd1	100	72.514	ENSSPAG00000011049	ptcd1	100	72.514	Stegastes_partitus
ENSPNYG00000019993	ptcd1	88	46.584	ENSSSCG00000007622	-	88	49.577	Sus_scrofa
ENSPNYG00000019993	ptcd1	80	47.945	ENSTGUG00000007563	-	95	48.464	Taeniopygia_guttata
ENSPNYG00000019993	ptcd1	96	65.665	ENSTRUG00000013471	ptcd1	99	64.910	Takifugu_rubripes
ENSPNYG00000019993	ptcd1	95	63.873	ENSTNIG00000008271	ptcd1	99	63.873	Tetraodon_nigroviridis
ENSPNYG00000019993	ptcd1	80	48.409	ENSTBEG00000011021	-	84	48.409	Tupaia_belangeri
ENSPNYG00000019993	ptcd1	80	48.814	ENSTTRG00000003006	-	83	48.814	Tursiops_truncatus
ENSPNYG00000019993	ptcd1	83	48.849	ENSUAMG00000008049	-	86	48.933	Ursus_americanus
ENSPNYG00000019993	ptcd1	83	50.000	ENSVVUG00000008836	-	86	50.000	Vulpes_vulpes
ENSPNYG00000019993	ptcd1	80	46.218	ENSXETG00000009891	ptcd1	84	46.218	Xenopus_tropicalis
ENSPNYG00000019993	ptcd1	89	69.640	ENSXMAG00000015540	ptcd1	90	69.797	Xiphophorus_maculatus