EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000020063 (Gene tree)
Gene ID: 102207954
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3501 bases
Position: chrJH419676.1:131137-134637
Accession: 102207954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000026634	TruB_N	PF01509.18	2.8e-21	1	1
ENSPNYP00000026634	PUA	PF01472.20	1.3e-16	1	1
ENSPNYP00000026634	DKCLD	PF08068.12	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000027284	-	1509	XM_005753854	ENSPNYP00000026634	502 (aa)	XP_005753911	-

Gene Model

Click here to download ENSPNYG00000020063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020063	dkc1	88	80.000	ENSG00000130826	DKC1	99	87.379	Homo_sapiens
ENSPNYG00000020063	dkc1	88	88.435	ENSAPOG00000007799	dkc1	91	86.737	Acanthochromis_polyacanthus
ENSPNYG00000020063	dkc1	86	80.182	ENSAMEG00000002776	DKC1	86	80.182	Ailuropoda_melanoleuca
ENSPNYG00000020063	dkc1	98	88.531	ENSACIG00000022614	dkc1	98	88.531	Amphilophus_citrinellus
ENSPNYG00000020063	dkc1	99	83.597	ENSAOCG00000013159	dkc1	96	85.979	Amphiprion_ocellaris
ENSPNYG00000020063	dkc1	95	86.307	ENSAPEG00000002284	dkc1	96	85.773	Amphiprion_percula
ENSPNYG00000020063	dkc1	89	86.593	ENSATEG00000013682	dkc1	94	85.223	Anabas_testudineus
ENSPNYG00000020063	dkc1	88	79.733	ENSACAG00000015600	DKC1	76	80.089	Anolis_carolinensis
ENSPNYG00000020063	dkc1	88	80.225	ENSANAG00000022732	DKC1	86	80.225	Aotus_nancymaae
ENSPNYG00000020063	dkc1	100	96.215	ENSACLG00000015605	dkc1	99	96.215	Astatotilapia_calliptera
ENSPNYG00000020063	dkc1	89	85.011	ENSAMXG00000017108	dkc1	92	80.943	Astyanax_mexicanus
ENSPNYG00000020063	dkc1	88	80.317	ENSBTAG00000013045	DKC1	87	80.317	Bos_taurus
ENSPNYG00000020063	dkc1	80	65.757	WBGene00010478	K01G5.5	88	66.412	Caenorhabditis_elegans
ENSPNYG00000020063	dkc1	87	80.180	ENSCJAG00000004210	DKC1	85	80.180	Callithrix_jacchus
ENSPNYG00000020063	dkc1	79	86.111	ENSCAFG00000019620	-	77	86.111	Canis_familiaris
ENSPNYG00000020063	dkc1	79	76.709	ENSCAFG00000009311	-	78	76.709	Canis_familiaris
ENSPNYG00000020063	dkc1	79	86.111	ENSCAFG00020008918	-	77	86.111	Canis_lupus_dingo
ENSPNYG00000020063	dkc1	79	75.696	ENSCAFG00020009379	-	75	75.696	Canis_lupus_dingo
ENSPNYG00000020063	dkc1	87	80.594	ENSCHIG00000017392	DKC1	86	80.227	Capra_hircus
ENSPNYG00000020063	dkc1	88	78.667	ENSTSYG00000007681	DKC1	86	78.667	Carlito_syrichta
ENSPNYG00000020063	dkc1	82	79.856	ENSCAPG00000003342	DKC1	92	80.685	Cavia_aperea
ENSPNYG00000020063	dkc1	88	78.667	ENSCPOG00000008825	DKC1	86	79.018	Cavia_porcellus
ENSPNYG00000020063	dkc1	88	70.787	ENSCCAG00000027418	DKC1	84	70.787	Cebus_capucinus
ENSPNYG00000020063	dkc1	88	80.000	ENSCATG00000033602	DKC1	86	80.000	Cercocebus_atys
ENSPNYG00000020063	dkc1	88	79.510	ENSCLAG00000000720	DKC1	87	79.866	Chinchilla_lanigera
ENSPNYG00000020063	dkc1	88	79.775	ENSCSAG00000006706	DKC1	86	79.775	Chlorocebus_sabaeus
ENSPNYG00000020063	dkc1	90	77.778	ENSCPBG00000005858	DKC1	85	86.616	Chrysemys_picta_bellii
ENSPNYG00000020063	dkc1	83	76.667	ENSCING00000004599	-	83	74.371	Ciona_intestinalis
ENSPNYG00000020063	dkc1	79	79.648	ENSCSAVG00000010047	-	89	79.198	Ciona_savignyi
ENSPNYG00000020063	dkc1	88	79.775	ENSCANG00000027987	DKC1	86	79.775	Colobus_angolensis_palliatus
ENSPNYG00000020063	dkc1	88	79.638	ENSCGRG00001014574	-	86	80.000	Cricetulus_griseus_chok1gshd
ENSPNYG00000020063	dkc1	77	65.544	ENSCGRG00001016789	-	79	66.757	Cricetulus_griseus_chok1gshd
ENSPNYG00000020063	dkc1	77	65.544	ENSCGRG00000014809	-	77	66.757	Cricetulus_griseus_crigri
ENSPNYG00000020063	dkc1	88	79.638	ENSCGRG00000016075	-	86	80.000	Cricetulus_griseus_crigri
ENSPNYG00000020063	dkc1	95	84.728	ENSCSEG00000012633	dkc1	85	92.481	Cynoglossus_semilaevis
ENSPNYG00000020063	dkc1	89	86.830	ENSCVAG00000010155	dkc1	94	84.615	Cyprinodon_variegatus
ENSPNYG00000020063	dkc1	79	92.714	ENSDARG00000016484	dkc1	87	86.105	Danio_rerio
ENSPNYG00000020063	dkc1	88	80.674	ENSDNOG00000004218	DKC1	86	80.856	Dasypus_novemcinctus
ENSPNYG00000020063	dkc1	56	72.401	ENSDORG00000013566	-	91	72.924	Dipodomys_ordii
ENSPNYG00000020063	dkc1	88	69.005	FBgn0259937	Nop60B	88	70.500	Drosophila_melanogaster
ENSPNYG00000020063	dkc1	88	79.365	ENSETEG00000016095	DKC1	90	79.365	Echinops_telfairi
ENSPNYG00000020063	dkc1	66	78.116	ENSEBUG00000015962	dkc1	98	82.131	Eptatretus_burgeri
ENSPNYG00000020063	dkc1	88	78.808	ENSEASG00005007484	DKC1	86	78.808	Equus_asinus_asinus
ENSPNYG00000020063	dkc1	88	78.808	ENSECAG00000023524	DKC1	86	78.808	Equus_caballus
ENSPNYG00000020063	dkc1	77	87.113	ENSEEUG00000003323	DKC1	99	81.862	Erinaceus_europaeus
ENSPNYG00000020063	dkc1	88	85.586	ENSELUG00000014538	dkc1	84	85.941	Esox_lucius
ENSPNYG00000020063	dkc1	79	85.678	ENSFCAG00000006577	DKC1	78	85.894	Felis_catus
ENSPNYG00000020063	dkc1	91	79.004	ENSFALG00000011496	DKC1	89	78.419	Ficedula_albicollis
ENSPNYG00000020063	dkc1	88	79.819	ENSFDAG00000002516	DKC1	86	80.182	Fukomys_damarensis
ENSPNYG00000020063	dkc1	88	87.783	ENSFHEG00000004627	dkc1	93	86.250	Fundulus_heteroclitus
ENSPNYG00000020063	dkc1	78	89.514	ENSGMOG00000017277	dkc1	100	89.514	Gadus_morhua
ENSPNYG00000020063	dkc1	86	83.410	ENSGALG00000005054	DKC1	91	78.556	Gallus_gallus
ENSPNYG00000020063	dkc1	88	88.739	ENSGAFG00000011486	dkc1	79	87.686	Gambusia_affinis
ENSPNYG00000020063	dkc1	79	93.719	ENSGACG00000004373	dkc1	96	94.833	Gasterosteus_aculeatus
ENSPNYG00000020063	dkc1	89	78.795	ENSGAGG00000011330	DKC1	84	80.594	Gopherus_agassizii
ENSPNYG00000020063	dkc1	88	80.000	ENSGGOG00000001045	DKC1	86	80.000	Gorilla_gorilla
ENSPNYG00000020063	dkc1	98	94.297	ENSHBUG00000012436	dkc1	96	94.297	Haplochromis_burtoni
ENSPNYG00000020063	dkc1	79	85.678	ENSHGLG00000000649	DKC1	77	86.111	Heterocephalus_glaber_female
ENSPNYG00000020063	dkc1	79	85.678	ENSHGLG00100001153	DKC1	77	86.111	Heterocephalus_glaber_male
ENSPNYG00000020063	dkc1	93	84.335	ENSHCOG00000021099	dkc1	85	86.301	Hippocampus_comes
ENSPNYG00000020063	dkc1	87	86.667	ENSIPUG00000010309	dkc1	85	84.753	Ictalurus_punctatus
ENSPNYG00000020063	dkc1	88	80.000	ENSSTOG00000001074	-	91	80.361	Ictidomys_tridecemlineatus
ENSPNYG00000020063	dkc1	88	69.507	ENSSTOG00000011904	-	82	69.820	Ictidomys_tridecemlineatus
ENSPNYG00000020063	dkc1	88	73.077	ENSSTOG00000020149	-	85	73.409	Ictidomys_tridecemlineatus
ENSPNYG00000020063	dkc1	55	73.285	ENSJJAG00000010086	-	92	73.285	Jaculus_jaculus
ENSPNYG00000020063	dkc1	88	85.714	ENSKMAG00000008010	dkc1	92	84.861	Kryptolebias_marmoratus
ENSPNYG00000020063	dkc1	87	88.182	ENSLBEG00000019122	dkc1	88	88.235	Labrus_bergylta
ENSPNYG00000020063	dkc1	89	79.018	ENSLACG00000014025	DKC1	90	86.364	Latimeria_chalumnae
ENSPNYG00000020063	dkc1	90	84.292	ENSLOCG00000013713	dkc1	88	86.574	Lepisosteus_oculatus
ENSPNYG00000020063	dkc1	88	80.134	ENSLAFG00000000221	DKC1	86	80.313	Loxodonta_africana
ENSPNYG00000020063	dkc1	88	79.775	ENSMFAG00000032398	DKC1	74	79.775	Macaca_fascicularis
ENSPNYG00000020063	dkc1	88	79.775	ENSMMUG00000005768	DKC1	86	79.775	Macaca_mulatta
ENSPNYG00000020063	dkc1	88	79.775	ENSMNEG00000034503	DKC1	86	79.775	Macaca_nemestrina
ENSPNYG00000020063	dkc1	88	79.775	ENSMLEG00000034422	DKC1	86	79.775	Mandrillus_leucophaeus
ENSPNYG00000020063	dkc1	83	94.019	ENSMAMG00000005427	dkc1	92	94.417	Mastacembelus_armatus
ENSPNYG00000020063	dkc1	98	94.501	ENSMZEG00005014503	dkc1	96	94.501	Maylandia_zebra
ENSPNYG00000020063	dkc1	79	84.712	ENSMGAG00000009238	DKC1	94	79.405	Meleagris_gallopavo
ENSPNYG00000020063	dkc1	56	71.685	ENSMAUG00000016454	-	91	72.202	Mesocricetus_auratus
ENSPNYG00000020063	dkc1	81	73.171	ENSMICG00000002818	-	99	76.438	Microcebus_murinus
ENSPNYG00000020063	dkc1	88	79.864	ENSMICG00000038751	-	87	79.412	Microcebus_murinus
ENSPNYG00000020063	dkc1	56	68.100	ENSMOCG00000001169	-	91	68.592	Microtus_ochrogaster
ENSPNYG00000020063	dkc1	82	93.902	ENSMMOG00000020348	dkc1	87	94.472	Mola_mola
ENSPNYG00000020063	dkc1	78	86.768	ENSMODG00000009243	DKC1	68	86.768	Monodelphis_domestica
ENSPNYG00000020063	dkc1	97	84.774	ENSMALG00000009454	dkc1	90	84.958	Monopterus_albus
ENSPNYG00000020063	dkc1	88	68.791	MGP_CAROLIEiJ_G0033191	Dkc1	86	82.540	Mus_caroli
ENSPNYG00000020063	dkc1	88	78.889	ENSMUSG00000031403	Dkc1	86	79.241	Mus_musculus
ENSPNYG00000020063	dkc1	88	77.902	MGP_PahariEiJ_G0031735	Dkc1	86	78.251	Mus_pahari
ENSPNYG00000020063	dkc1	88	78.889	MGP_SPRETEiJ_G0034351	Dkc1	86	79.241	Mus_spretus
ENSPNYG00000020063	dkc1	87	79.596	ENSMPUG00000016136	DKC1	83	79.596	Mustela_putorius_furo
ENSPNYG00000020063	dkc1	79	82.412	ENSMLUG00000011918	DKC1	92	72.614	Myotis_lucifugus
ENSPNYG00000020063	dkc1	56	72.760	ENSNGAG00000015724	-	92	73.285	Nannospalax_galili
ENSPNYG00000020063	dkc1	89	98.430	ENSNBRG00000005638	dkc1	90	98.430	Neolamprologus_brichardi
ENSPNYG00000020063	dkc1	88	79.775	ENSNLEG00000014323	DKC1	86	79.775	Nomascus_leucogenys
ENSPNYG00000020063	dkc1	90	74.058	ENSMEUG00000001066	DKC1	93	74.833	Notamacropus_eugenii
ENSPNYG00000020063	dkc1	69	80.172	ENSOPRG00000005248	DKC1	69	80.172	Ochotona_princeps
ENSPNYG00000020063	dkc1	56	72.401	ENSODEG00000000549	-	91	72.924	Octodon_degus
ENSPNYG00000020063	dkc1	79	87.879	ENSODEG00000011816	-	86	80.942	Octodon_degus
ENSPNYG00000020063	dkc1	98	92.495	ENSONIG00000013889	dkc1	96	92.495	Oreochromis_niloticus
ENSPNYG00000020063	dkc1	58	60.726	ENSOANG00000022295	-	93	57.738	Ornithorhynchus_anatinus
ENSPNYG00000020063	dkc1	86	83.256	ENSOANG00000008713	-	95	79.437	Ornithorhynchus_anatinus
ENSPNYG00000020063	dkc1	87	79.505	ENSOCUG00000012646	DKC1	86	79.505	Oryctolagus_cuniculus
ENSPNYG00000020063	dkc1	92	84.665	ENSORLG00000018748	dkc1	90	84.154	Oryzias_latipes
ENSPNYG00000020063	dkc1	88	84.305	ENSOMEG00000005786	dkc1	88	87.500	Oryzias_melastigma
ENSPNYG00000020063	dkc1	88	78.166	ENSOGAG00000003399	DKC1	86	78.166	Otolemur_garnettii
ENSPNYG00000020063	dkc1	87	80.455	ENSOARG00000003047	DKC1	86	80.822	Ovis_aries
ENSPNYG00000020063	dkc1	88	80.000	ENSPPAG00000023820	DKC1	86	80.000	Pan_paniscus
ENSPNYG00000020063	dkc1	79	85.678	ENSPPRG00000009104	DKC1	78	85.894	Panthera_pardus
ENSPNYG00000020063	dkc1	79	85.678	ENSPTIG00000017469	DKC1	80	85.894	Panthera_tigris_altaica
ENSPNYG00000020063	dkc1	88	79.642	ENSPTRG00000043416	-	74	80.000	Pan_troglodytes
ENSPNYG00000020063	dkc1	88	80.000	ENSPTRG00000022449	DKC1	86	80.000	Pan_troglodytes
ENSPNYG00000020063	dkc1	88	79.775	ENSPANG00000011978	DKC1	86	79.775	Papio_anubis
ENSPNYG00000020063	dkc1	88	84.910	ENSPKIG00000008443	dkc1	99	81.381	Paramormyrops_kingsleyae
ENSPNYG00000020063	dkc1	71	89.944	ENSPSIG00000013765	DKC1	86	89.944	Pelodiscus_sinensis
ENSPNYG00000020063	dkc1	79	87.719	ENSPMGG00000004097	dkc1	77	86.842	Periophthalmus_magnuspinnatus
ENSPNYG00000020063	dkc1	65	86.207	ENSPEMG00000013348	Dkc1	83	84.884	Peromyscus_maniculatus_bairdii
ENSPNYG00000020063	dkc1	79	86.181	ENSPCIG00000016706	DKC1	72	82.258	Phascolarctos_cinereus
ENSPNYG00000020063	dkc1	88	88.764	ENSPFOG00000018653	dkc1	92	87.712	Poecilia_formosa
ENSPNYG00000020063	dkc1	88	88.764	ENSPLAG00000003272	dkc1	83	87.712	Poecilia_latipinna
ENSPNYG00000020063	dkc1	88	88.764	ENSPMEG00000010413	dkc1	92	87.712	Poecilia_mexicana
ENSPNYG00000020063	dkc1	88	89.462	ENSPREG00000004100	dkc1	92	87.474	Poecilia_reticulata
ENSPNYG00000020063	dkc1	88	80.000	ENSPPYG00000020892	DKC1	86	80.000	Pongo_abelii
ENSPNYG00000020063	dkc1	72	87.569	ENSPCAG00000015034	DKC1	71	87.569	Procavia_capensis
ENSPNYG00000020063	dkc1	88	80.543	ENSPCOG00000026874	DKC1	86	80.543	Propithecus_coquereli
ENSPNYG00000020063	dkc1	88	79.773	ENSPVAG00000009222	DKC1	86	79.773	Pteropus_vampyrus
ENSPNYG00000020063	dkc1	92	83.476	ENSPNAG00000005780	dkc1	90	84.199	Pygocentrus_nattereri
ENSPNYG00000020063	dkc1	88	75.839	ENSRNOG00000055562	Dkc1	87	75.839	Rattus_norvegicus
ENSPNYG00000020063	dkc1	88	79.775	ENSRBIG00000028457	DKC1	74	79.775	Rhinopithecus_bieti
ENSPNYG00000020063	dkc1	88	79.775	ENSRROG00000044780	DKC1	86	79.775	Rhinopithecus_roxellana
ENSPNYG00000020063	dkc1	76	71.540	YLR175W	-	87	66.825	Saccharomyces_cerevisiae
ENSPNYG00000020063	dkc1	88	79.775	ENSSBOG00000033746	DKC1	85	79.775	Saimiri_boliviensis_boliviensis
ENSPNYG00000020063	dkc1	87	80.045	ENSSHAG00000002463	DKC1	92	80.594	Sarcophilus_harrisii
ENSPNYG00000020063	dkc1	88	84.375	ENSSFOG00015009585	dkc1	86	84.910	Scleropages_formosus
ENSPNYG00000020063	dkc1	91	84.902	ENSSMAG00000002552	dkc1	84	85.779	Scophthalmus_maximus
ENSPNYG00000020063	dkc1	94	84.388	ENSSDUG00000009963	dkc1	95	84.318	Seriola_dumerili
ENSPNYG00000020063	dkc1	93	85.897	ENSSLDG00000019342	dkc1	92	87.892	Seriola_lalandi_dorsalis
ENSPNYG00000020063	dkc1	88	77.009	ENSSARG00000001822	DKC1	87	77.551	Sorex_araneus
ENSPNYG00000020063	dkc1	79	85.859	ENSSPUG00000018907	DKC1	92	75.975	Sphenodon_punctatus
ENSPNYG00000020063	dkc1	95	86.242	ENSSPAG00000002585	dkc1	93	85.714	Stegastes_partitus
ENSPNYG00000020063	dkc1	80	85.750	ENSSSCG00000012823	DKC1	83	86.364	Sus_scrofa
ENSPNYG00000020063	dkc1	80	85.500	ENSTGUG00000006781	DKC1	89	84.367	Taeniopygia_guttata
ENSPNYG00000020063	dkc1	94	84.421	ENSTRUG00000004413	dkc1	93	83.122	Takifugu_rubripes
ENSPNYG00000020063	dkc1	88	71.429	ENSTNIG00000002582	dkc1	86	71.685	Tetraodon_nigroviridis
ENSPNYG00000020063	dkc1	54	86.245	ENSTBEG00000011262	DKC1	85	78.387	Tupaia_belangeri
ENSPNYG00000020063	dkc1	55	87.004	ENSTTRG00000008089	DKC1	55	87.004	Tursiops_truncatus
ENSPNYG00000020063	dkc1	79	86.111	ENSUAMG00000022721	DKC1	83	86.111	Ursus_americanus
ENSPNYG00000020063	dkc1	79	85.606	ENSUMAG00000016899	DKC1	93	87.863	Ursus_maritimus
ENSPNYG00000020063	dkc1	92	63.203	ENSVVUG00000021671	-	73	70.455	Vulpes_vulpes
ENSPNYG00000020063	dkc1	79	84.198	ENSVVUG00000020734	-	69	84.615	Vulpes_vulpes
ENSPNYG00000020063	dkc1	87	82.883	ENSXETG00000032517	DKC1	87	84.404	Xenopus_tropicalis
ENSPNYG00000020063	dkc1	89	88.641	ENSXCOG00000005498	dkc1	99	87.002	Xiphophorus_couchianus
ENSPNYG00000020063	dkc1	89	88.367	ENSXMAG00000004919	dkc1	97	85.253	Xiphophorus_maculatus