EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000020293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 9705 bases
Position: chrJH419517.1:36380-46084
Accession: 102198129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000027072	RRM_1	PF00076.22	3.3e-13	1	1
ENSPNYP00000027003	RRM_1	PF00076.22	4.1e-13	1	1
ENSPNYP00000027043	RRM_1	PF00076.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000027704	-	939	-	ENSPNYP00000027043	312 (aa)	-	-
ENSPNYT00000027664	-	879	XM_013915489	ENSPNYP00000027003	292 (aa)	XP_013770943	-
ENSPNYT00000027733	-	756	-	ENSPNYP00000027072	251 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000020293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000020293	-	91	53.200	ENSPNYG00000003548	-	73	59.174
ENSPNYG00000020293	-	87	80.000	ENSPNYG00000003747	-	87	82.692
ENSPNYG00000020293	-	85	44.907	ENSPNYG00000011247	raly	61	50.952
ENSPNYG00000020293	-	85	55.349	ENSPNYG00000008772	-	74	56.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020293	-	89	52.697	ENSG00000184672	RALYL	93	78.481	Homo_sapiens
ENSPNYG00000020293	-	86	92.400	ENSAPOG00000006963	hnrnpc	89	87.050	Acanthochromis_polyacanthus
ENSPNYG00000020293	-	87	80.934	ENSACIG00000016568	-	92	79.283	Amphilophus_citrinellus
ENSPNYG00000020293	-	87	95.703	ENSACIG00000000270	-	93	91.367	Amphilophus_citrinellus
ENSPNYG00000020293	-	86	92.000	ENSAOCG00000003896	-	89	86.691	Amphiprion_ocellaris
ENSPNYG00000020293	-	86	80.632	ENSAOCG00000021616	-	80	83.721	Amphiprion_ocellaris
ENSPNYG00000020293	-	86	92.000	ENSAPEG00000001489	-	89	86.691	Amphiprion_percula
ENSPNYG00000020293	-	87	81.712	ENSAPEG00000019962	-	82	84.496	Amphiprion_percula
ENSPNYG00000020293	-	87	81.154	ENSATEG00000018006	-	78	89.151	Anabas_testudineus
ENSPNYG00000020293	-	87	92.157	ENSATEG00000011734	-	93	87.004	Anabas_testudineus
ENSPNYG00000020293	-	85	54.626	ENSAPLG00000015574	RALYL	88	52.124	Anas_platyrhynchos
ENSPNYG00000020293	-	91	51.807	ENSACAG00000028464	RALYL	87	53.282	Anolis_carolinensis
ENSPNYG00000020293	-	89	52.282	ENSANAG00000023383	RALYL	80	53.527	Aotus_nancymaae
ENSPNYG00000020293	-	99	98.616	ENSACLG00000013636	-	97	98.616	Astatotilapia_calliptera
ENSPNYG00000020293	-	87	79.615	ENSACLG00000005707	-	87	82.308	Astatotilapia_calliptera
ENSPNYG00000020293	-	86	98.800	ENSACLG00000000995	-	91	96.029	Astatotilapia_calliptera
ENSPNYG00000020293	-	87	79.921	ENSAMXG00000034915	zgc:55733	87	76.772	Astyanax_mexicanus
ENSPNYG00000020293	-	71	80.000	ENSAMXG00000042946	hnrnpc	95	78.191	Astyanax_mexicanus
ENSPNYG00000020293	-	89	52.500	ENSCJAG00000000402	RALYL	80	53.112	Callithrix_jacchus
ENSPNYG00000020293	-	85	55.310	ENSCPOG00000012314	RALYL	75	58.590	Cavia_porcellus
ENSPNYG00000020293	-	90	51.852	ENSCCAG00000025003	RALYL	77	78.481	Cebus_capucinus
ENSPNYG00000020293	-	89	52.697	ENSCATG00000042145	RALYL	80	53.527	Cercocebus_atys
ENSPNYG00000020293	-	85	55.310	ENSCLAG00000005228	RALYL	75	58.590	Chinchilla_lanigera
ENSPNYG00000020293	-	85	53.744	ENSCHOG00000013228	RALYL	75	54.425	Choloepus_hoffmanni
ENSPNYG00000020293	-	89	52.697	ENSCANG00000039144	RALYL	80	53.527	Colobus_angolensis_palliatus
ENSPNYG00000020293	-	85	55.066	ENSCGRG00001009241	Ralyl	75	58.150	Cricetulus_griseus_chok1gshd
ENSPNYG00000020293	-	87	77.434	ENSCSEG00000021349	-	80	79.457	Cynoglossus_semilaevis
ENSPNYG00000020293	-	85	71.493	ENSCSEG00000019769	-	72	79.717	Cynoglossus_semilaevis
ENSPNYG00000020293	-	91	75.373	ENSCVAG00000002797	-	93	72.043	Cyprinodon_variegatus
ENSPNYG00000020293	-	86	82.745	ENSCVAG00000016981	-	81	80.755	Cyprinodon_variegatus
ENSPNYG00000020293	-	87	76.444	ENSDARG00000053810	hnrnpc	80	78.516	Danio_rerio
ENSPNYG00000020293	-	87	81.102	ENSDARG00000103845	zgc:55733	91	79.921	Danio_rerio
ENSPNYG00000020293	-	85	55.507	ENSDORG00000003721	Ralyl	75	59.031	Dipodomys_ordii
ENSPNYG00000020293	-	69	57.471	ENSETEG00000014028	RALYL	83	62.195	Echinops_telfairi
ENSPNYG00000020293	-	85	43.162	ENSEBUG00000012363	hnrnpc	66	47.639	Eptatretus_burgeri
ENSPNYG00000020293	-	92	44.604	ENSEBUG00000006049	RALYL	74	49.763	Eptatretus_burgeri
ENSPNYG00000020293	-	85	55.507	ENSEEUG00000007202	RALYL	77	58.850	Erinaceus_europaeus
ENSPNYG00000020293	-	84	83.077	ENSELUG00000007714	-	89	81.818	Esox_lucius
ENSPNYG00000020293	-	86	80.859	ENSELUG00000004132	-	88	79.848	Esox_lucius
ENSPNYG00000020293	-	96	50.000	ENSFALG00000008647	RALYL	96	57.746	Ficedula_albicollis
ENSPNYG00000020293	-	87	76.838	ENSFHEG00000007278	-	90	71.096	Fundulus_heteroclitus
ENSPNYG00000020293	-	92	85.874	ENSFHEG00000003605	-	91	85.199	Fundulus_heteroclitus
ENSPNYG00000020293	-	85	54.626	ENSGALG00000036938	RALYL	75	57.080	Gallus_gallus
ENSPNYG00000020293	-	87	79.767	ENSGAFG00000020992	-	82	81.323	Gambusia_affinis
ENSPNYG00000020293	-	92	85.874	ENSGAFG00000020486	-	91	85.921	Gambusia_affinis
ENSPNYG00000020293	-	91	78.598	ENSGACG00000017772	-	97	79.528	Gasterosteus_aculeatus
ENSPNYG00000020293	-	87	67.111	ENSGACG00000018932	-	85	72.811	Gasterosteus_aculeatus
ENSPNYG00000020293	-	89	52.697	ENSGGOG00000000841	RALYL	80	53.527	Gorilla_gorilla
ENSPNYG00000020293	-	87	80.000	ENSHBUG00000010527	-	81	82.692	Haplochromis_burtoni
ENSPNYG00000020293	-	95	96.390	ENSHBUG00000018342	-	91	96.390	Haplochromis_burtoni
ENSPNYG00000020293	-	85	54.867	ENSHGLG00000004866	RALYL	75	58.150	Heterocephalus_glaber_female
ENSPNYG00000020293	-	85	54.867	ENSHGLG00100017480	RALYL	75	58.150	Heterocephalus_glaber_male
ENSPNYG00000020293	-	86	77.358	ENSHCOG00000012333	hnrnpc	97	70.470	Hippocampus_comes
ENSPNYG00000020293	-	87	79.528	ENSIPUG00000008666	zgc:55733	92	84.211	Ictalurus_punctatus
ENSPNYG00000020293	-	86	81.028	ENSIPUG00000011271	hnrnpc	97	82.511	Ictalurus_punctatus
ENSPNYG00000020293	-	85	55.066	ENSSTOG00000012583	RALYL	77	58.590	Ictidomys_tridecemlineatus
ENSPNYG00000020293	-	98	86.063	ENSKMAG00000011170	-	83	88.976	Kryptolebias_marmoratus
ENSPNYG00000020293	-	86	78.346	ENSKMAG00000018265	-	80	80.695	Kryptolebias_marmoratus
ENSPNYG00000020293	-	92	84.074	ENSLBEG00000006979	-	85	83.806	Labrus_bergylta
ENSPNYG00000020293	-	92	80.714	ENSLBEG00000024418	-	86	78.927	Labrus_bergylta
ENSPNYG00000020293	-	87	81.250	ENSLBEG00000006193	-	81	80.233	Labrus_bergylta
ENSPNYG00000020293	-	86	71.364	ENSLOCG00000002560	hnrnpc	89	70.115	Lepisosteus_oculatus
ENSPNYG00000020293	-	89	52.697	ENSMNEG00000033288	RALYL	80	53.527	Macaca_nemestrina
ENSPNYG00000020293	-	89	52.697	ENSMLEG00000038284	RALYL	80	53.527	Mandrillus_leucophaeus
ENSPNYG00000020293	-	86	92.800	ENSMAMG00000012236	-	92	85.252	Mastacembelus_armatus
ENSPNYG00000020293	-	89	79.433	ENSMAMG00000008033	-	89	82.625	Mastacembelus_armatus
ENSPNYG00000020293	-	99	92.833	ENSMZEG00005020460	-	100	92.150	Maylandia_zebra
ENSPNYG00000020293	-	87	79.615	ENSMZEG00005024249	-	81	83.137	Maylandia_zebra
ENSPNYG00000020293	-	85	55.066	ENSMAUG00000015149	Ralyl	75	58.150	Mesocricetus_auratus
ENSPNYG00000020293	-	91	52.419	ENSMICG00000005558	RALYL	80	78.481	Microcebus_murinus
ENSPNYG00000020293	-	85	55.066	ENSMOCG00000017371	Ralyl	75	58.150	Microtus_ochrogaster
ENSPNYG00000020293	-	88	91.860	ENSMMOG00000021465	-	91	91.860	Mola_mola
ENSPNYG00000020293	-	85	82.329	ENSMMOG00000019520	-	89	79.478	Mola_mola
ENSPNYG00000020293	-	87	80.709	ENSMALG00000007520	-	92	76.978	Monopterus_albus
ENSPNYG00000020293	-	87	82.879	ENSMALG00000014623	-	81	82.879	Monopterus_albus
ENSPNYG00000020293	-	85	54.626	ENSMUSG00000039717	Ralyl	93	77.215	Mus_musculus
ENSPNYG00000020293	-	85	57.018	ENSMPUG00000010724	RALYL	75	57.709	Mustela_putorius_furo
ENSPNYG00000020293	-	85	55.066	ENSNGAG00000013375	Ralyl	75	58.150	Nannospalax_galili
ENSPNYG00000020293	-	87	80.000	ENSNBRG00000015676	-	81	82.692	Neolamprologus_brichardi
ENSPNYG00000020293	-	97	96.358	ENSNBRG00000004912	-	93	98.165	Neolamprologus_brichardi
ENSPNYG00000020293	-	90	51.481	ENSNLEG00000002702	RALYL	76	53.527	Nomascus_leucogenys
ENSPNYG00000020293	-	73	51.031	ENSOPRG00000013650	-	98	51.031	Ochotona_princeps
ENSPNYG00000020293	-	85	54.867	ENSODEG00000001012	RALYL	75	57.709	Octodon_degus
ENSPNYG00000020293	-	87	80.000	ENSONIG00000018350	-	81	82.692	Oreochromis_niloticus
ENSPNYG00000020293	-	92	94.604	ENSONIG00000007859	-	96	94.604	Oreochromis_niloticus
ENSPNYG00000020293	-	86	79.310	ENSORLG00000003144	-	80	81.203	Oryzias_latipes
ENSPNYG00000020293	-	86	78.968	ENSORLG00000009999	-	83	78.599	Oryzias_latipes
ENSPNYG00000020293	-	86	78.571	ENSORLG00020018228	hnrnpc	83	78.210	Oryzias_latipes_hni
ENSPNYG00000020293	-	86	79.310	ENSORLG00015009460	-	79	81.203	Oryzias_latipes_hsok
ENSPNYG00000020293	-	86	78.968	ENSORLG00015019755	-	83	78.599	Oryzias_latipes_hsok
ENSPNYG00000020293	-	86	80.159	ENSOMEG00000020488	-	83	79.377	Oryzias_melastigma
ENSPNYG00000020293	-	86	82.283	ENSOMEG00000022665	-	80	83.784	Oryzias_melastigma
ENSPNYG00000020293	-	89	52.697	ENSPPAG00000038705	RALYL	79	54.959	Pan_paniscus
ENSPNYG00000020293	-	85	57.895	ENSPPRG00000018612	RALYL	73	58.216	Panthera_pardus
ENSPNYG00000020293	-	85	57.895	ENSPTIG00000020331	RALYL	73	58.216	Panthera_tigris_altaica
ENSPNYG00000020293	-	89	52.697	ENSPTRG00000020381	RALYL	80	53.527	Pan_troglodytes
ENSPNYG00000020293	-	89	52.697	ENSPANG00000029305	RALYL	80	53.527	Papio_anubis
ENSPNYG00000020293	-	87	80.460	ENSPKIG00000022837	-	82	83.012	Paramormyrops_kingsleyae
ENSPNYG00000020293	-	87	80.608	ENSPKIG00000008592	-	89	78.947	Paramormyrops_kingsleyae
ENSPNYG00000020293	-	85	54.626	ENSPSIG00000011135	RALYL	86	52.692	Pelodiscus_sinensis
ENSPNYG00000020293	-	87	80.357	ENSPMGG00000013144	-	80	85.782	Periophthalmus_magnuspinnatus
ENSPNYG00000020293	-	86	73.516	ENSPMGG00000017774	-	92	67.411	Periophthalmus_magnuspinnatus
ENSPNYG00000020293	-	85	55.066	ENSPEMG00000016447	Ralyl	75	58.150	Peromyscus_maniculatus_bairdii
ENSPNYG00000020293	-	85	53.043	ENSPMAG00000002407	RALYL	96	54.185	Petromyzon_marinus
ENSPNYG00000020293	-	86	79.842	ENSPFOG00000002643	-	81	80.534	Poecilia_formosa
ENSPNYG00000020293	-	92	88.148	ENSPFOG00000001583	-	91	87.770	Poecilia_formosa
ENSPNYG00000020293	-	86	79.842	ENSPLAG00000000061	-	79	81.783	Poecilia_latipinna
ENSPNYG00000020293	-	92	86.989	ENSPLAG00000015305	-	91	86.643	Poecilia_latipinna
ENSPNYG00000020293	-	86	79.447	ENSPMEG00000016524	-	79	81.395	Poecilia_mexicana
ENSPNYG00000020293	-	92	88.104	ENSPMEG00000004802	-	91	87.726	Poecilia_mexicana
ENSPNYG00000020293	-	86	79.051	ENSPREG00000001852	-	88	79.924	Poecilia_reticulata
ENSPNYG00000020293	-	92	87.361	ENSPREG00000007928	-	91	87.004	Poecilia_reticulata
ENSPNYG00000020293	-	90	43.071	ENSPPYG00000018710	-	75	45.652	Pongo_abelii
ENSPNYG00000020293	-	85	54.425	ENSPVAG00000010821	RALYL	79	52.766	Pteropus_vampyrus
ENSPNYG00000020293	-	87	78.161	ENSPNAG00000019200	zgc:55733	81	78.516	Pygocentrus_nattereri
ENSPNYG00000020293	-	87	78.125	ENSPNAG00000015686	hnrnpc	86	81.250	Pygocentrus_nattereri
ENSPNYG00000020293	-	89	52.697	ENSRROG00000023925	RALYL	82	76.543	Rhinopithecus_roxellana
ENSPNYG00000020293	-	88	75.379	ENSSFOG00015012015	-	81	88.152	Scleropages_formosus
ENSPNYG00000020293	-	91	77.178	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSPNYG00000020293	-	86	79.688	ENSSMAG00000011147	-	78	84.834	Scophthalmus_maximus
ENSPNYG00000020293	-	86	86.400	ENSSMAG00000013592	-	87	81.588	Scophthalmus_maximus
ENSPNYG00000020293	-	87	82.946	ENSSDUG00000006730	-	81	82.558	Seriola_dumerili
ENSPNYG00000020293	-	92	89.552	ENSSDUG00000001723	-	89	87.050	Seriola_dumerili
ENSPNYG00000020293	-	90	90.875	ENSSLDG00000007454	-	84	91.373	Seriola_lalandi_dorsalis
ENSPNYG00000020293	-	87	82.946	ENSSLDG00000007474	-	89	82.558	Seriola_lalandi_dorsalis
ENSPNYG00000020293	-	58	78.495	ENSSARG00000002374	RALYL	77	47.032	Sorex_araneus
ENSPNYG00000020293	-	87	81.395	ENSSPAG00000013996	-	81	82.946	Stegastes_partitus
ENSPNYG00000020293	-	91	92.830	ENSSPAG00000023204	-	89	88.129	Stegastes_partitus
ENSPNYG00000020293	-	96	49.612	ENSTGUG00000011689	RALYL	88	51.751	Taeniopygia_guttata
ENSPNYG00000020293	-	88	84.436	ENSTRUG00000020158	-	85	83.268	Takifugu_rubripes
ENSPNYG00000020293	-	86	76.471	ENSTNIG00000000334	-	94	74.427	Tetraodon_nigroviridis
ENSPNYG00000020293	-	87	77.068	ENSTNIG00000007427	-	84	79.923	Tetraodon_nigroviridis
ENSPNYG00000020293	-	91	46.154	ENSTBEG00000005551	RALYL	87	50.442	Tupaia_belangeri
ENSPNYG00000020293	-	85	52.655	ENSTTRG00000015762	RALYL	75	56.000	Tursiops_truncatus
ENSPNYG00000020293	-	91	47.984	ENSVPAG00000008501	RALYL	75	54.425	Vicugna_pacos
ENSPNYG00000020293	-	90	81.887	ENSXCOG00000006552	-	82	81.746	Xiphophorus_couchianus
ENSPNYG00000020293	-	66	88.485	ENSXCOG00000019434	-	96	73.246	Xiphophorus_couchianus
ENSPNYG00000020293	-	86	79.051	ENSXMAG00000022849	-	83	81.008	Xiphophorus_maculatus
ENSPNYG00000020293	-	92	85.874	ENSXMAG00000009333	-	91	85.560	Xiphophorus_maculatus