EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000020534 (Gene tree)
Gene ID: 102203347
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 5540 bases
Position: chrJH419257.1:394868-400407
Accession: 102203347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000027228	zf-C2H2	PF00096.26	7.6e-23	1	4
ENSPNYP00000027228	zf-C2H2	PF00096.26	7.6e-23	2	4
ENSPNYP00000027228	zf-C2H2	PF00096.26	7.6e-23	3	4
ENSPNYP00000027228	zf-C2H2	PF00096.26	7.6e-23	4	4
ENSPNYP00000027228	zf-met	PF12874.7	0.00048	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000027893	-	3047	XM_005733425	ENSPNYP00000027228	599 (aa)	XP_005733482	UPI0006AB4020

Gene Model

Click here to download ENSPNYG00000020534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000020534	-	61	42.342	ENSPNYG00000010420	-	76	42.342
ENSPNYG00000020534	-	55	48.148	ENSPNYG00000012877	znf236	69	45.833
ENSPNYG00000020534	-	55	37.838	ENSPNYG00000021571	-	93	37.838
ENSPNYG00000020534	-	57	37.500	ENSPNYG00000022104	-	92	40.000
ENSPNYG00000020534	-	55	35.052	ENSPNYG00000022279	PRDM15	50	35.052
ENSPNYG00000020534	-	99	32.543	ENSPNYG00000022227	-	88	32.701
ENSPNYG00000020534	-	60	33.243	ENSPNYG00000015803	-	92	40.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020534	-	99	66.113	ENSGAFG00000016139	-	96	66.391	Gambusia_affinis
ENSPNYG00000020534	-	68	33.929	ENSLBEG00000014676	-	73	33.929	Labrus_bergylta
ENSPNYG00000020534	-	56	74.487	ENSMALG00000014761	-	98	74.487	Monopterus_albus
ENSPNYG00000020534	-	99	62.046	ENSORLG00000014311	-	96	62.046	Oryzias_latipes
ENSPNYG00000020534	-	99	62.211	ENSORLG00020016116	-	96	62.211	Oryzias_latipes_hni
ENSPNYG00000020534	-	99	61.296	ENSORLG00015014797	-	96	61.386	Oryzias_latipes_hsok
ENSPNYG00000020534	-	97	70.513	ENSPFOG00000004204	-	96	63.622	Poecilia_formosa
ENSPNYG00000020534	-	100	65.282	ENSPLAG00000022088	-	90	65.728	Poecilia_latipinna
ENSPNYG00000020534	-	100	65.449	ENSPMEG00000001411	-	90	65.728	Poecilia_mexicana
ENSPNYG00000020534	-	99	66.445	ENSPREG00000004161	-	96	66.722	Poecilia_reticulata
ENSPNYG00000020534	-	99	65.615	ENSXMAG00000011035	-	96	65.894	Xiphophorus_maculatus