EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000020603 (Gene tree)
Gene ID: 102196293
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 24276 bases
Position: chrJH419355.1:645705-669980
Accession: 102196293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000027353	RRM_1	PF00076.22	8.1e-15	1	2
ENSPNYP00000027353	RRM_1	PF00076.22	8.1e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000028022	-	1497	XM_005744881	ENSPNYP00000027353	498 (aa)	XP_005744938	-

Gene Model

Click here to download ENSPNYG00000020603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020603	rnpc3	96	54.251	ENSG00000185946	RNPC3	96	57.895	Homo_sapiens
ENSPNYG00000020603	rnpc3	99	86.028	ENSAPOG00000017371	rnpc3	99	86.028	Acanthochromis_polyacanthus
ENSPNYG00000020603	rnpc3	96	54.858	ENSAMEG00000001694	RNPC3	94	54.949	Ailuropoda_melanoleuca
ENSPNYG00000020603	rnpc3	99	85.127	ENSACIG00000021043	rnpc3	100	85.127	Amphilophus_citrinellus
ENSPNYG00000020603	rnpc3	99	84.843	ENSAOCG00000014052	rnpc3	98	84.843	Amphiprion_ocellaris
ENSPNYG00000020603	rnpc3	99	84.646	ENSAPEG00000008739	rnpc3	98	84.646	Amphiprion_percula
ENSPNYG00000020603	rnpc3	99	80.312	ENSATEG00000021263	rnpc3	99	80.312	Anabas_testudineus
ENSPNYG00000020603	rnpc3	89	56.347	ENSAPLG00000015605	RNPC3	99	56.347	Anas_platyrhynchos
ENSPNYG00000020603	rnpc3	95	55.136	ENSACAG00000002029	RNPC3	96	53.279	Anolis_carolinensis
ENSPNYG00000020603	rnpc3	96	54.343	ENSANAG00000019950	RNPC3	95	54.343	Aotus_nancymaae
ENSPNYG00000020603	rnpc3	100	99.398	ENSACLG00000014702	rnpc3	100	99.398	Astatotilapia_calliptera
ENSPNYG00000020603	rnpc3	99	64.971	ENSAMXG00000033372	rnpc3	99	65.166	Astyanax_mexicanus
ENSPNYG00000020603	rnpc3	96	54.767	ENSBTAG00000019091	RNPC3	95	54.767	Bos_taurus
ENSPNYG00000020603	rnpc3	96	54.453	ENSCJAG00000035686	RNPC3	94	54.453	Callithrix_jacchus
ENSPNYG00000020603	rnpc3	96	54.564	ENSCAFG00000019972	RNPC3	94	54.656	Canis_familiaris
ENSPNYG00000020603	rnpc3	96	54.564	ENSCAFG00020011300	RNPC3	94	54.656	Canis_lupus_dingo
ENSPNYG00000020603	rnpc3	96	55.152	ENSCHIG00000020361	RNPC3	95	54.656	Capra_hircus
ENSPNYG00000020603	rnpc3	96	54.049	ENSTSYG00000030256	RNPC3	95	54.049	Carlito_syrichta
ENSPNYG00000020603	rnpc3	85	44.270	ENSCAPG00000013600	RNPC3	97	44.444	Cavia_aperea
ENSPNYG00000020603	rnpc3	96	52.705	ENSCPOG00000031638	RNPC3	95	52.705	Cavia_porcellus
ENSPNYG00000020603	rnpc3	96	54.141	ENSCCAG00000024301	RNPC3	95	54.141	Cebus_capucinus
ENSPNYG00000020603	rnpc3	96	54.141	ENSCATG00000002086	RNPC3	94	54.343	Cercocebus_atys
ENSPNYG00000020603	rnpc3	96	41.736	ENSCATG00000035930	-	52	48.750	Cercocebus_atys
ENSPNYG00000020603	rnpc3	96	51.277	ENSCLAG00000005169	RNPC3	95	52.227	Chinchilla_lanigera
ENSPNYG00000020603	rnpc3	96	54.343	ENSCSAG00000001519	RNPC3	94	54.343	Chlorocebus_sabaeus
ENSPNYG00000020603	rnpc3	96	57.143	ENSCPBG00000028311	RNPC3	95	57.143	Chrysemys_picta_bellii
ENSPNYG00000020603	rnpc3	95	38.525	ENSCING00000021276	-	99	38.525	Ciona_intestinalis
ENSPNYG00000020603	rnpc3	94	37.736	ENSCSAVG00000002800	-	76	55.385	Ciona_savignyi
ENSPNYG00000020603	rnpc3	96	53.737	ENSCANG00000031444	RNPC3	94	54.032	Colobus_angolensis_palliatus
ENSPNYG00000020603	rnpc3	97	54.125	ENSCGRG00001019276	Rnpc3	95	53.939	Cricetulus_griseus_chok1gshd
ENSPNYG00000020603	rnpc3	89	52.298	ENSCGRG00000000053	Rnpc3	99	52.088	Cricetulus_griseus_crigri
ENSPNYG00000020603	rnpc3	99	76.471	ENSCSEG00000013475	rnpc3	99	76.471	Cynoglossus_semilaevis
ENSPNYG00000020603	rnpc3	99	78.865	ENSCVAG00000002645	rnpc3	99	78.865	Cyprinodon_variegatus
ENSPNYG00000020603	rnpc3	99	63.922	ENSDARG00000011247	rnpc3	99	64.314	Danio_rerio
ENSPNYG00000020603	rnpc3	96	54.767	ENSDNOG00000047498	-	95	54.767	Dasypus_novemcinctus
ENSPNYG00000020603	rnpc3	96	54.361	ENSDNOG00000044555	-	95	54.361	Dasypus_novemcinctus
ENSPNYG00000020603	rnpc3	96	53.659	ENSDORG00000027343	Rnpc3	95	53.659	Dipodomys_ordii
ENSPNYG00000020603	rnpc3	97	50.097	ENSEBUG00000002068	rnpc3	98	50.195	Eptatretus_burgeri
ENSPNYG00000020603	rnpc3	96	54.767	ENSEASG00005015957	RNPC3	94	54.767	Equus_asinus_asinus
ENSPNYG00000020603	rnpc3	96	54.656	ENSECAG00000021148	RNPC3	94	54.656	Equus_caballus
ENSPNYG00000020603	rnpc3	99	67.816	ENSELUG00000002264	rnpc3	99	66.411	Esox_lucius
ENSPNYG00000020603	rnpc3	96	54.564	ENSFCAG00000024312	RNPC3	94	54.564	Felis_catus
ENSPNYG00000020603	rnpc3	89	56.473	ENSFALG00000002580	RNPC3	99	55.902	Ficedula_albicollis
ENSPNYG00000020603	rnpc3	96	53.846	ENSFDAG00000019948	RNPC3	95	53.846	Fukomys_damarensis
ENSPNYG00000020603	rnpc3	99	75.152	ENSFHEG00000020647	rnpc3	99	75.152	Fundulus_heteroclitus
ENSPNYG00000020603	rnpc3	100	68.849	ENSGMOG00000019213	rnpc3	99	68.390	Gadus_morhua
ENSPNYG00000020603	rnpc3	96	56.352	ENSGALG00000005162	RNPC3	88	56.468	Gallus_gallus
ENSPNYG00000020603	rnpc3	99	77.318	ENSGAFG00000017236	rnpc3	99	77.318	Gambusia_affinis
ENSPNYG00000020603	rnpc3	100	80.512	ENSGACG00000002048	rnpc3	99	80.078	Gasterosteus_aculeatus
ENSPNYG00000020603	rnpc3	96	57.347	ENSGAGG00000008438	RNPC3	94	57.551	Gopherus_agassizii
ENSPNYG00000020603	rnpc3	97	47.934	ENSGGOG00000026201	-	95	47.835	Gorilla_gorilla
ENSPNYG00000020603	rnpc3	82	97.959	ENSHBUG00000015966	rnpc3	85	97.959	Haplochromis_burtoni
ENSPNYG00000020603	rnpc3	96	53.106	ENSHGLG00000001708	RNPC3	95	53.106	Heterocephalus_glaber_female
ENSPNYG00000020603	rnpc3	96	53.106	ENSHGLG00100003005	RNPC3	95	53.106	Heterocephalus_glaber_male
ENSPNYG00000020603	rnpc3	99	74.553	ENSHCOG00000017135	rnpc3	99	74.553	Hippocampus_comes
ENSPNYG00000020603	rnpc3	99	63.492	ENSIPUG00000002916	rnpc3	99	63.601	Ictalurus_punctatus
ENSPNYG00000020603	rnpc3	96	53.846	ENSSTOG00000025020	RNPC3	95	53.846	Ictidomys_tridecemlineatus
ENSPNYG00000020603	rnpc3	96	52.857	ENSJJAG00000010203	Rnpc3	95	52.857	Jaculus_jaculus
ENSPNYG00000020603	rnpc3	99	79.840	ENSKMAG00000017358	rnpc3	100	79.441	Kryptolebias_marmoratus
ENSPNYG00000020603	rnpc3	99	82.178	ENSLBEG00000024901	rnpc3	97	82.178	Labrus_bergylta
ENSPNYG00000020603	rnpc3	99	57.937	ENSLACG00000005720	RNPC3	92	55.754	Latimeria_chalumnae
ENSPNYG00000020603	rnpc3	99	64.427	ENSLOCG00000007986	rnpc3	99	61.462	Lepisosteus_oculatus
ENSPNYG00000020603	rnpc3	96	54.472	ENSLAFG00000032342	RNPC3	95	54.545	Loxodonta_africana
ENSPNYG00000020603	rnpc3	96	54.141	ENSMFAG00000002004	RNPC3	94	54.343	Macaca_fascicularis
ENSPNYG00000020603	rnpc3	96	41.788	ENSMFAG00000002917	-	94	41.250	Macaca_fascicularis
ENSPNYG00000020603	rnpc3	78	52.683	ENSMMUG00000002098	-	85	52.174	Macaca_mulatta
ENSPNYG00000020603	rnpc3	96	53.939	ENSMMUG00000018039	RNPC3	94	54.141	Macaca_mulatta
ENSPNYG00000020603	rnpc3	96	50.909	ENSMNEG00000033950	RNPC3	94	51.111	Macaca_nemestrina
ENSPNYG00000020603	rnpc3	96	40.625	ENSMNEG00000029209	-	99	41.814	Macaca_nemestrina
ENSPNYG00000020603	rnpc3	96	54.141	ENSMLEG00000033628	RNPC3	94	54.343	Mandrillus_leucophaeus
ENSPNYG00000020603	rnpc3	96	41.260	ENSMLEG00000034644	-	95	41.129	Mandrillus_leucophaeus
ENSPNYG00000020603	rnpc3	99	72.835	ENSMAMG00000007496	rnpc3	99	72.835	Mastacembelus_armatus
ENSPNYG00000020603	rnpc3	99	95.736	ENSMZEG00005020233	rnpc3	100	95.720	Maylandia_zebra
ENSPNYG00000020603	rnpc3	89	56.264	ENSMGAG00000006381	RNPC3	99	56.264	Meleagris_gallopavo
ENSPNYG00000020603	rnpc3	96	54.397	ENSMAUG00000001358	Rnpc3	95	54.397	Mesocricetus_auratus
ENSPNYG00000020603	rnpc3	96	53.644	ENSMICG00000029591	RNPC3	95	53.644	Microcebus_murinus
ENSPNYG00000020603	rnpc3	96	54.361	ENSMOCG00000013423	Rnpc3	94	54.361	Microtus_ochrogaster
ENSPNYG00000020603	rnpc3	99	76.364	ENSMMOG00000005309	rnpc3	99	78.182	Mola_mola
ENSPNYG00000020603	rnpc3	97	55.624	ENSMODG00000002946	RNPC3	95	55.624	Monodelphis_domestica
ENSPNYG00000020603	rnpc3	98	76.190	ENSMALG00000015471	rnpc3	99	76.190	Monopterus_albus
ENSPNYG00000020603	rnpc3	96	54.786	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.786	Mus_caroli
ENSPNYG00000020603	rnpc3	96	54.970	ENSMUSG00000027981	Rnpc3	99	53.319	Mus_musculus
ENSPNYG00000020603	rnpc3	96	54.564	MGP_PahariEiJ_G0027001	Rnpc3	96	54.564	Mus_pahari
ENSPNYG00000020603	rnpc3	96	54.767	MGP_SPRETEiJ_G0026505	Rnpc3	96	54.767	Mus_spretus
ENSPNYG00000020603	rnpc3	96	54.490	ENSMPUG00000007349	RNPC3	94	54.049	Mustela_putorius_furo
ENSPNYG00000020603	rnpc3	96	54.234	ENSMLUG00000028743	RNPC3	94	54.234	Myotis_lucifugus
ENSPNYG00000020603	rnpc3	96	54.361	ENSNGAG00000010939	Rnpc3	95	54.361	Nannospalax_galili
ENSPNYG00000020603	rnpc3	100	99.197	ENSNBRG00000012196	rnpc3	97	99.197	Neolamprologus_brichardi
ENSPNYG00000020603	rnpc3	96	54.251	ENSNLEG00000012013	RNPC3	95	54.453	Nomascus_leucogenys
ENSPNYG00000020603	rnpc3	96	52.834	ENSODEG00000007612	RNPC3	95	53.144	Octodon_degus
ENSPNYG00000020603	rnpc3	100	92.564	ENSONIG00000004770	rnpc3	100	93.238	Oreochromis_niloticus
ENSPNYG00000020603	rnpc3	91	56.009	ENSOANG00000008220	RNPC3	99	56.009	Ornithorhynchus_anatinus
ENSPNYG00000020603	rnpc3	96	54.032	ENSOCUG00000004016	RNPC3	95	53.737	Oryctolagus_cuniculus
ENSPNYG00000020603	rnpc3	99	76.908	ENSORLG00000005694	rnpc3	99	76.660	Oryzias_latipes
ENSPNYG00000020603	rnpc3	99	76.861	ENSORLG00020005513	rnpc3	99	77.000	Oryzias_latipes_hni
ENSPNYG00000020603	rnpc3	99	76.660	ENSORLG00015002179	rnpc3	99	76.660	Oryzias_latipes_hsok
ENSPNYG00000020603	rnpc3	99	77.666	ENSOMEG00000017737	rnpc3	99	77.666	Oryzias_melastigma
ENSPNYG00000020603	rnpc3	96	54.656	ENSOGAG00000026182	RNPC3	95	54.656	Otolemur_garnettii
ENSPNYG00000020603	rnpc3	96	55.152	ENSOARG00000018719	RNPC3	95	54.656	Ovis_aries
ENSPNYG00000020603	rnpc3	96	54.032	ENSPPAG00000037459	RNPC3	95	54.234	Pan_paniscus
ENSPNYG00000020603	rnpc3	97	48.660	ENSPPAG00000030278	-	97	48.660	Pan_paniscus
ENSPNYG00000020603	rnpc3	96	54.472	ENSPPRG00000020246	RNPC3	94	54.472	Panthera_pardus
ENSPNYG00000020603	rnpc3	96	54.472	ENSPTIG00000009887	RNPC3	96	54.472	Panthera_tigris_altaica
ENSPNYG00000020603	rnpc3	97	48.041	ENSPTRG00000044227	-	97	48.041	Pan_troglodytes
ENSPNYG00000020603	rnpc3	96	53.939	ENSPTRG00000033902	RNPC3	95	54.141	Pan_troglodytes
ENSPNYG00000020603	rnpc3	96	44.467	ENSPANG00000029957	-	96	42.308	Papio_anubis
ENSPNYG00000020603	rnpc3	96	54.251	ENSPANG00000012137	RNPC3	94	54.453	Papio_anubis
ENSPNYG00000020603	rnpc3	98	66.000	ENSPKIG00000008828	rnpc3	97	63.800	Paramormyrops_kingsleyae
ENSPNYG00000020603	rnpc3	64	53.517	ENSPSIG00000007396	RNPC3	99	54.740	Pelodiscus_sinensis
ENSPNYG00000020603	rnpc3	99	65.680	ENSPMGG00000011742	rnpc3	98	65.606	Periophthalmus_magnuspinnatus
ENSPNYG00000020603	rnpc3	92	50.851	ENSPEMG00000020112	Rnpc3	99	52.088	Peromyscus_maniculatus_bairdii
ENSPNYG00000020603	rnpc3	96	41.556	ENSPMAG00000003778	rnpc3	96	44.250	Petromyzon_marinus
ENSPNYG00000020603	rnpc3	97	56.237	ENSPCIG00000004415	-	95	56.237	Phascolarctos_cinereus
ENSPNYG00000020603	rnpc3	99	79.290	ENSPFOG00000009895	rnpc3	99	79.290	Poecilia_formosa
ENSPNYG00000020603	rnpc3	99	79.093	ENSPLAG00000012023	rnpc3	99	79.093	Poecilia_latipinna
ENSPNYG00000020603	rnpc3	99	79.528	ENSPMEG00000003663	rnpc3	99	79.487	Poecilia_mexicana
ENSPNYG00000020603	rnpc3	99	79.010	ENSPREG00000010206	rnpc3	99	79.010	Poecilia_reticulata
ENSPNYG00000020603	rnpc3	80	50.242	ENSPPYG00000001102	RNPC3	93	50.242	Pongo_abelii
ENSPNYG00000020603	rnpc3	99	58.382	ENSPNAG00000000524	rnpc3	92	58.880	Pygocentrus_nattereri
ENSPNYG00000020603	rnpc3	96	53.862	ENSRNOG00000017310	Rnpc3	95	54.065	Rattus_norvegicus
ENSPNYG00000020603	rnpc3	96	51.008	ENSRBIG00000043897	RNPC3	94	51.210	Rhinopithecus_bieti
ENSPNYG00000020603	rnpc3	96	54.141	ENSRROG00000032334	RNPC3	94	54.343	Rhinopithecus_roxellana
ENSPNYG00000020603	rnpc3	96	54.453	ENSSBOG00000024473	RNPC3	95	54.453	Saimiri_boliviensis_boliviensis
ENSPNYG00000020603	rnpc3	97	55.263	ENSSHAG00000011859	RNPC3	95	55.263	Sarcophilus_harrisii
ENSPNYG00000020603	rnpc3	99	67.583	ENSSFOG00015013055	rnpc3	99	69.262	Scleropages_formosus
ENSPNYG00000020603	rnpc3	99	79.102	ENSSMAG00000020346	rnpc3	99	79.102	Scophthalmus_maximus
ENSPNYG00000020603	rnpc3	99	83.922	ENSSDUG00000006600	rnpc3	99	83.922	Seriola_dumerili
ENSPNYG00000020603	rnpc3	99	83.922	ENSSLDG00000007979	rnpc3	99	83.922	Seriola_lalandi_dorsalis
ENSPNYG00000020603	rnpc3	95	53.782	ENSSPUG00000003872	-	90	53.782	Sphenodon_punctatus
ENSPNYG00000020603	rnpc3	95	56.341	ENSSPUG00000008539	-	92	56.341	Sphenodon_punctatus
ENSPNYG00000020603	rnpc3	99	84.569	ENSSPAG00000005633	rnpc3	99	83.567	Stegastes_partitus
ENSPNYG00000020603	rnpc3	96	53.452	ENSSSCG00000037254	RNPC3	95	55.172	Sus_scrofa
ENSPNYG00000020603	rnpc3	89	57.047	ENSTGUG00000004795	-	99	57.047	Taeniopygia_guttata
ENSPNYG00000020603	rnpc3	99	76.096	ENSTNIG00000018963	rnpc3	99	76.096	Tetraodon_nigroviridis
ENSPNYG00000020603	rnpc3	96	54.767	ENSUMAG00000007775	RNPC3	96	54.858	Ursus_maritimus
ENSPNYG00000020603	rnpc3	96	54.564	ENSVVUG00000000331	RNPC3	94	54.656	Vulpes_vulpes
ENSPNYG00000020603	rnpc3	96	44.622	ENSXETG00000025027	rnpc3	96	43.888	Xenopus_tropicalis
ENSPNYG00000020603	rnpc3	52	78.409	ENSXCOG00000005013	rnpc3	99	77.756	Xiphophorus_couchianus
ENSPNYG00000020603	rnpc3	99	78.304	ENSXMAG00000006495	rnpc3	99	78.304	Xiphophorus_maculatus