EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000020729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5334 bases
Position: chrJH419225.1:569764-575097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000027546	RRM_1	PF00076.22	1e-34	1	2
ENSPNYP00000027546	RRM_1	PF00076.22	1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000028219	-	591	-	ENSPNYP00000027546	196 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000020729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000020729	-	93	37.245	ENSPNYG00000017318	dazap1	56	37.245
ENSPNYG00000020729	-	87	37.059	ENSPNYG00000004884	hnrnpd	53	36.628
ENSPNYG00000020729	-	79	30.337	ENSPNYG00000017486	celf5a	50	30.337
ENSPNYG00000020729	-	82	43.902	ENSPNYG00000007198	-	58	43.902
ENSPNYG00000020729	-	93	34.973	ENSPNYG00000004379	MSI1	52	34.973
ENSPNYG00000020729	-	96	33.684	ENSPNYG00000007072	tardbpl	63	32.653
ENSPNYG00000020729	-	84	35.802	ENSPNYG00000021720	elavl4	62	35.802
ENSPNYG00000020729	-	86	35.802	ENSPNYG00000001514	ELAVL2	74	35.802
ENSPNYG00000020729	-	84	35.802	ENSPNYG00000012769	elavl1a	66	35.802
ENSPNYG00000020729	-	89	40.909	ENSPNYG00000013003	-	55	40.449
ENSPNYG00000020729	-	90	60.227	ENSPNYG00000008424	hnrnpa3	76	60.227
ENSPNYG00000020729	-	93	35.519	ENSPNYG00000002529	-	52	35.519
ENSPNYG00000020729	-	77	32.000	ENSPNYG00000019872	-	52	32.000
ENSPNYG00000020729	-	94	35.754	ENSPNYG00000018393	msi2a	59	35.754
ENSPNYG00000020729	-	90	60.227	ENSPNYG00000017019	hnrnpa1b	75	57.592
ENSPNYG00000020729	-	89	39.773	ENSPNYG00000000303	hnrnpaba	52	39.326
ENSPNYG00000020729	-	86	38.667	ENSPNYG00000019727	-	91	38.667
ENSPNYG00000020729	-	91	75.843	ENSPNYG00000020763	-	85	74.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020729	-	95	57.979	ENSAPOG00000019369	-	58	57.979	Acanthochromis_polyacanthus
ENSPNYG00000020729	-	91	76.404	ENSACIG00000021815	-	96	71.429	Amphilophus_citrinellus
ENSPNYG00000020729	-	95	57.979	ENSAOCG00000005289	-	58	57.979	Amphiprion_ocellaris
ENSPNYG00000020729	-	95	57.979	ENSAPEG00000004179	-	58	57.979	Amphiprion_percula
ENSPNYG00000020729	-	90	96.273	ENSATEG00000003423	-	76	96.273	Anabas_testudineus
ENSPNYG00000020729	-	95	56.915	ENSATEG00000022918	hnrnpa1a	92	56.915	Anabas_testudineus
ENSPNYG00000020729	-	90	68.927	ENSACAG00000017109	-	54	68.927	Anolis_carolinensis
ENSPNYG00000020729	-	90	60.227	ENSACLG00000006940	-	58	57.592	Astatotilapia_calliptera
ENSPNYG00000020729	-	90	81.818	ENSAMXG00000037730	-	53	81.818	Astyanax_mexicanus
ENSPNYG00000020729	-	92	57.778	ENSCSEG00000007589	hnrnpa1a	67	58.523	Cynoglossus_semilaevis
ENSPNYG00000020729	-	90	84.091	ENSCSEG00000014051	-	72	84.091	Cynoglossus_semilaevis
ENSPNYG00000020729	-	90	60.227	ENSCVAG00000012637	hnrnpa1a	57	58.511	Cyprinodon_variegatus
ENSPNYG00000020729	-	92	69.061	ENSDORG00000026425	-	54	66.492	Dipodomys_ordii
ENSPNYG00000020729	-	95	55.556	ENSELUG00000007372	-	50	57.955	Esox_lucius
ENSPNYG00000020729	-	91	78.212	ENSGMOG00000020353	-	97	76.882	Gadus_morhua
ENSPNYG00000020729	-	95	58.511	ENSGAFG00000007751	-	57	58.511	Gambusia_affinis
ENSPNYG00000020729	-	91	75.281	ENSGAFG00000016803	-	55	73.514	Gambusia_affinis
ENSPNYG00000020729	-	90	60.227	ENSHBUG00000005647	hnrnpa1a	59	57.592	Haplochromis_burtoni
ENSPNYG00000020729	-	91	82.584	ENSIPUG00000001991	-	79	80.541	Ictalurus_punctatus
ENSPNYG00000020729	-	96	57.714	ENSIPUG00000002023	hnrnpa1a	72	57.714	Ictalurus_punctatus
ENSPNYG00000020729	-	90	59.659	ENSIPUG00000022440	-	70	59.509	Ictalurus_punctatus
ENSPNYG00000020729	-	90	59.091	ENSKMAG00000020859	-	57	57.447	Kryptolebias_marmoratus
ENSPNYG00000020729	-	90	59.091	ENSLBEG00000010010	hnrnpa1a	52	59.091	Labrus_bergylta
ENSPNYG00000020729	-	90	52.809	ENSMFAG00000028351	-	56	51.872	Macaca_fascicularis
ENSPNYG00000020729	-	92	58.333	ENSMAMG00000007606	-	53	59.091	Mastacembelus_armatus
ENSPNYG00000020729	-	90	60.227	ENSMZEG00005027173	hnrnpa1a	58	57.592	Maylandia_zebra
ENSPNYG00000020729	-	90	58.523	ENSMMOG00000008251	hnrnpa1a	75	58.523	Mola_mola
ENSPNYG00000020729	-	91	75.281	ENSMALG00000008886	-	91	73.262	Monopterus_albus
ENSPNYG00000020729	-	90	58.523	ENSMALG00000014091	hnrnpa1a	52	58.523	Monopterus_albus
ENSPNYG00000020729	-	90	60.227	ENSNBRG00000018441	-	59	57.592	Neolamprologus_brichardi
ENSPNYG00000020729	-	99	100.000	ENSNBRG00000014469	-	90	100.000	Neolamprologus_brichardi
ENSPNYG00000020729	-	97	70.370	ENSORLG00000029240	-	96	70.370	Oryzias_latipes
ENSPNYG00000020729	-	90	60.227	ENSORLG00000008001	-	58	58.511	Oryzias_latipes
ENSPNYG00000020729	-	99	68.718	ENSORLG00020022498	-	91	68.718	Oryzias_latipes_hni
ENSPNYG00000020729	-	88	74.566	ENSORLG00020006043	-	60	74.566	Oryzias_latipes_hni
ENSPNYG00000020729	-	90	60.227	ENSORLG00020006582	hnrnpa1a	87	58.824	Oryzias_latipes_hni
ENSPNYG00000020729	-	90	60.227	ENSORLG00015022294	-	58	58.511	Oryzias_latipes_hsok
ENSPNYG00000020729	-	90	60.227	ENSOMEG00000015959	-	58	58.511	Oryzias_melastigma
ENSPNYG00000020729	-	92	59.444	ENSPMGG00000011804	hnrnpa1a	76	59.444	Periophthalmus_magnuspinnatus
ENSPNYG00000020729	-	90	86.286	ENSPMGG00000016392	-	94	86.286	Periophthalmus_magnuspinnatus
ENSPNYG00000020729	-	95	58.511	ENSPFOG00000001825	-	57	58.511	Poecilia_formosa
ENSPNYG00000020729	-	95	58.511	ENSPMEG00000002425	-	57	58.511	Poecilia_mexicana
ENSPNYG00000020729	-	96	59.211	ENSPNAG00000007752	hnrnpa1a	76	56.757	Pygocentrus_nattereri
ENSPNYG00000020729	-	94	57.754	ENSPNAG00000021630	-	59	57.754	Pygocentrus_nattereri
ENSPNYG00000020729	-	90	59.091	ENSSMAG00000004641	hnrnpa1a	59	59.091	Scophthalmus_maximus
ENSPNYG00000020729	-	91	71.910	ENSSMAG00000010246	-	79	71.910	Scophthalmus_maximus
ENSPNYG00000020729	-	90	88.690	ENSSMAG00000010279	-	94	88.690	Scophthalmus_maximus
ENSPNYG00000020729	-	93	58.791	ENSSDUG00000013908	hnrnpa1a	85	58.791	Seriola_dumerili
ENSPNYG00000020729	-	88	95.954	ENSSDUG00000002431	-	82	95.954	Seriola_dumerili
ENSPNYG00000020729	-	92	58.333	ENSSLDG00000003718	hnrnpa1a	83	56.250	Seriola_lalandi_dorsalis
ENSPNYG00000020729	-	96	57.895	ENSSPAG00000018518	-	59	57.895	Stegastes_partitus
ENSPNYG00000020729	-	90	57.386	ENSTRUG00000020491	-	55	57.386	Takifugu_rubripes
ENSPNYG00000020729	-	94	85.946	ENSTNIG00000007398	-	73	82.990	Tetraodon_nigroviridis
ENSPNYG00000020729	-	92	58.889	ENSXCOG00000009001	-	83	57.979	Xiphophorus_couchianus
ENSPNYG00000020729	-	95	57.979	ENSXMAG00000008076	-	56	57.979	Xiphophorus_maculatus