EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000020926 (Gene tree)
Gene ID: 102193620
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 2551 bases
Position: chrJH419225.1:1340229-1342779
Accession: 102193620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000027831	Gar1	PF04410.14	2.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000028511	-	723	XM_005726474	ENSPNYP00000027831	240 (aa)	XP_005726531	-

Gene Model

Click here to download ENSPNYG00000020926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000020926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000020926	gar1	55	84.091	ENSAMEG00000004605	GAR1	54	90.909	Ailuropoda_melanoleuca
ENSPNYG00000020926	gar1	62	84.167	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSPNYG00000020926	gar1	75	90.659	ENSACLG00000010029	gar1	77	95.604	Astatotilapia_calliptera
ENSPNYG00000020926	gar1	56	82.090	ENSBTAG00000000748	GAR1	52	91.818	Bos_taurus
ENSPNYG00000020926	gar1	54	84.496	ENSCAFG00020015566	GAR1	57	91.818	Canis_lupus_dingo
ENSPNYG00000020926	gar1	69	60.000	ENSCING00000005744	-	52	68.868	Ciona_intestinalis
ENSPNYG00000020926	gar1	58	79.286	ENSCVAG00000002103	gar1	53	97.273	Cyprinodon_variegatus
ENSPNYG00000020926	gar1	55	84.848	ENSFCAG00000040791	-	53	91.818	Felis_catus
ENSPNYG00000020926	gar1	70	98.214	ENSHBUG00000023860	gar1	86	98.214	Haplochromis_burtoni
ENSPNYG00000020926	gar1	71	80.000	ENSHCOG00000008656	gar1	64	90.071	Hippocampus_comes
ENSPNYG00000020926	gar1	65	83.226	ENSIPUG00000003194	gar1	52	95.455	Ictalurus_punctatus
ENSPNYG00000020926	gar1	68	85.124	ENSLACG00000003306	GAR1	64	88.679	Latimeria_chalumnae
ENSPNYG00000020926	gar1	58	79.856	ENSMALG00000009672	gar1	50	94.444	Monopterus_albus
ENSPNYG00000020926	gar1	55	84.848	ENSMPUG00000008615	GAR1	53	91.818	Mustela_putorius_furo
ENSPNYG00000020926	gar1	87	92.788	ENSNBRG00000014828	gar1	79	99.444	Neolamprologus_brichardi
ENSPNYG00000020926	gar1	55	84.848	ENSPPRG00000023697	GAR1	53	91.818	Panthera_pardus
ENSPNYG00000020926	gar1	55	84.848	ENSPTIG00000021565	GAR1	53	91.818	Panthera_tigris_altaica
ENSPNYG00000020926	gar1	61	76.147	ENSPTRG00000049340	-	51	75.701	Pan_troglodytes
ENSPNYG00000020926	gar1	51	86.992	ENSPSIG00000002970	GAR1	50	90.909	Pelodiscus_sinensis
ENSPNYG00000020926	gar1	62	83.784	ENSSLDG00000023264	gar1	52	98.182	Seriola_lalandi_dorsalis
ENSPNYG00000020926	gar1	77	82.517	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSPNYG00000020926	gar1	71	83.673	ENSSSCG00000009137	GAR1	69	86.429	Sus_scrofa
ENSPNYG00000020926	gar1	55	84.848	ENSVVUG00000017612	GAR1	57	91.818	Vulpes_vulpes