EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000021047 (Gene tree)
Gene ID
102204056
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Plus strand
Length
4496 bases
Position
chrJH419215.1:5095631-5100126
Accession
102204056
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000027982CPSF73-100_CPF11718.86.9e-4011
ENSPNYP00000027982Beta-CaspPF10996.87e-3411
ENSPNYP00000027982Lactamase_BPF00753.273e-0811
ENSPNYP00000027982RMMBLPF07521.123.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000028667CPSF3 (1 of many)-2011800XM_005723924ENSPNYP00000027982599 (aa)XP_005723981-
Gene Model
Click here to download ENSPNYG00000021047's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021047's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000021047CPSF39191.971ENSPNYG00000004405cpsf38891.971
ENSPNYG00000021047CPSF37037.412ENSPNYG00000021238ints117337.412
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000021047CPSF39191.529ENSG00000119203CPSF38792.500Homo_sapiens
ENSPNYG00000021047CPSF39291.486ENSAPOG00000022087cpsf39491.486Acanthochromis_polyacanthus
ENSPNYG00000021047CPSF37597.118ENSAPOG00000012241CPSF38996.053Acanthochromis_polyacanthus
ENSPNYG00000021047CPSF39191.529ENSAMEG00000008493CPSF37991.529Ailuropoda_melanoleuca
ENSPNYG00000021047CPSF39299.271ENSACIG00000023663CPSF38699.271Amphilophus_citrinellus
ENSPNYG00000021047CPSF39191.971ENSACIG00000009846cpsf38791.971Amphilophus_citrinellus
ENSPNYG00000021047CPSF39091.144ENSAOCG00000022056cpsf38690.926Amphiprion_ocellaris
ENSPNYG00000021047CPSF39298.732ENSAOCG00000010077CPSF39098.732Amphiprion_ocellaris
ENSPNYG00000021047CPSF39298.730ENSAPEG00000021167CPSF38898.730Amphiprion_percula
ENSPNYG00000021047CPSF39192.153ENSAPEG00000019526cpsf38892.153Amphiprion_percula
ENSPNYG00000021047CPSF39680.945ENSATEG00000014525CPSF39287.652Anabas_testudineus
ENSPNYG00000021047CPSF39391.219ENSATEG00000003959cpsf38991.219Anabas_testudineus
ENSPNYG00000021047CPSF39190.328ENSAPLG00000006941CPSF38090.328Anas_platyrhynchos
ENSPNYG00000021047CPSF39190.424ENSACAG00000001759CPSF38590.424Anolis_carolinensis
ENSPNYG00000021047CPSF39185.083ENSANAG00000031254CPSF38085.083Aotus_nancymaae
ENSPNYG00000021047CPSF39299.818ENSACLG00000018846CPSF38699.818Astatotilapia_calliptera
ENSPNYG00000021047CPSF39191.971ENSACLG00000014484cpsf38891.971Astatotilapia_calliptera
ENSPNYG00000021047CPSF39193.431ENSAMXG00000004786cpsf38893.431Astyanax_mexicanus
ENSPNYG00000021047CPSF39191.529ENSBTAG00000019735CPSF37991.529Bos_taurus
ENSPNYG00000021047CPSF38958.834WBGene00013460cpsf-37858.834Caenorhabditis_elegans
ENSPNYG00000021047CPSF39191.529ENSCJAG00000006276CPSF38091.529Callithrix_jacchus
ENSPNYG00000021047CPSF39191.529ENSCAFG00000003375CPSF37591.529Canis_familiaris
ENSPNYG00000021047CPSF39191.529ENSCAFG00020026799CPSF38791.529Canis_lupus_dingo
ENSPNYG00000021047CPSF39191.529ENSCHIG00000013973CPSF37991.529Capra_hircus
ENSPNYG00000021047CPSF39191.529ENSTSYG00000002967CPSF37991.529Carlito_syrichta
ENSPNYG00000021047CPSF39091.513ENSCAPG00000013851CPSF38191.513Cavia_aperea
ENSPNYG00000021047CPSF39091.513ENSCPOG00000011299CPSF37991.513Cavia_porcellus
ENSPNYG00000021047CPSF39191.529ENSCCAG00000036730CPSF38091.529Cebus_capucinus
ENSPNYG00000021047CPSF38891.856ENSCATG00000014770CPSF39091.856Cercocebus_atys
ENSPNYG00000021047CPSF39091.513ENSCLAG00000002727CPSF37991.513Chinchilla_lanigera
ENSPNYG00000021047CPSF39181.768ENSCSAG00000007125CPSF37781.768Chlorocebus_sabaeus
ENSPNYG00000021047CPSF38069.087ENSCHOG00000000180CPSF37269.087Choloepus_hoffmanni
ENSPNYG00000021047CPSF39190.608ENSCPBG00000014074CPSF37890.608Chrysemys_picta_bellii
ENSPNYG00000021047CPSF38973.084ENSCING00000007214-7773.084Ciona_intestinalis
ENSPNYG00000021047CPSF38981.955ENSCANG00000034435CPSF37881.955Colobus_angolensis_palliatus
ENSPNYG00000021047CPSF39191.160ENSCGRG00001013134Cpsf37991.160Cricetulus_griseus_chok1gshd
ENSPNYG00000021047CPSF39191.160ENSCGRG00000018319Cpsf37991.160Cricetulus_griseus_crigri
ENSPNYG00000021047CPSF39195.612ENSCSEG00000002021CPSF38895.612Cynoglossus_semilaevis
ENSPNYG00000021047CPSF39188.206ENSCVAG00000015067CPSF38596.125Cyprinodon_variegatus
ENSPNYG00000021047CPSF39285.075ENSDARG00000027649cpsf37892.818Danio_rerio
ENSPNYG00000021047CPSF39190.074ENSDNOG00000008940CPSF37590.074Dasypus_novemcinctus
ENSPNYG00000021047CPSF39191.344ENSDORG00000014263Cpsf38391.344Dipodomys_ordii
ENSPNYG00000021047CPSF39068.762FBgn0261065Cpsf737968.762Drosophila_melanogaster
ENSPNYG00000021047CPSF39180.663ENSETEG00000003893CPSF38380.663Echinops_telfairi
ENSPNYG00000021047CPSF39183.670ENSEBUG00000009018cpsf37683.670Eptatretus_burgeri
ENSPNYG00000021047CPSF39191.529ENSEASG00005003970CPSF37991.529Equus_asinus_asinus
ENSPNYG00000021047CPSF39191.529ENSECAG00000019911CPSF38891.193Equus_caballus
ENSPNYG00000021047CPSF39068.013ENSEEUG00000015422CPSF37972.928Erinaceus_europaeus
ENSPNYG00000021047CPSF39294.718ENSELUG00000013775cpsf38794.718Esox_lucius
ENSPNYG00000021047CPSF39191.529ENSFCAG00000007852CPSF38491.529Felis_catus
ENSPNYG00000021047CPSF39190.328ENSFALG00000006572CPSF38490.328Ficedula_albicollis
ENSPNYG00000021047CPSF39090.959ENSFDAG00000006317CPSF37890.959Fukomys_damarensis
ENSPNYG00000021047CPSF35380.757ENSFHEG00000012186CPSF37580.757Fundulus_heteroclitus
ENSPNYG00000021047CPSF39090.037ENSFHEG00000014774cpsf37990.037Fundulus_heteroclitus
ENSPNYG00000021047CPSF39390.631ENSGMOG00000003157cpsf38090.631Gadus_morhua
ENSPNYG00000021047CPSF39190.608ENSGALG00000016424CPSF38590.608Gallus_gallus
ENSPNYG00000021047CPSF39390.811ENSGAFG00000019449cpsf38890.811Gambusia_affinis
ENSPNYG00000021047CPSF39188.040ENSGAFG00000008016CPSF37896.310Gambusia_affinis
ENSPNYG00000021047CPSF36488.860ENSGAGG00000025583CPSF37788.860Gopherus_agassizii
ENSPNYG00000021047CPSF39191.529ENSGGOG00000001757CPSF38196.145Gorilla_gorilla
ENSPNYG00000021047CPSF353100.000ENSHBUG00000014332CPSF380100.000Haplochromis_burtoni
ENSPNYG00000021047CPSF39191.971ENSHBUG00000001188cpsf38891.971Haplochromis_burtoni
ENSPNYG00000021047CPSF39090.959ENSHGLG00000000666CPSF37890.959Heterocephalus_glaber_female
ENSPNYG00000021047CPSF39090.959ENSHGLG00100007765CPSF37890.959Heterocephalus_glaber_male
ENSPNYG00000021047CPSF39188.040ENSHCOG00000015957CPSF37795.941Hippocampus_comes
ENSPNYG00000021047CPSF39183.223ENSHCOG00000007251cpsf37990.590Hippocampus_comes
ENSPNYG00000021047CPSF39192.661ENSIPUG00000023488cpsf38692.661Ictalurus_punctatus
ENSPNYG00000021047CPSF39191.529ENSSTOG00000004476CPSF37991.529Ictidomys_tridecemlineatus
ENSPNYG00000021047CPSF39190.792ENSJJAG00000023415Cpsf37990.792Jaculus_jaculus
ENSPNYG00000021047CPSF39183.056ENSKMAG00000002806cpsf37990.590Kryptolebias_marmoratus
ENSPNYG00000021047CPSF39189.037ENSKMAG00000007317CPSF38597.048Kryptolebias_marmoratus
ENSPNYG00000021047CPSF39289.091ENSLBEG00000013492CPSF38997.064Labrus_bergylta
ENSPNYG00000021047CPSF35389.274ENSLBEG00000015018-8589.274Labrus_bergylta
ENSPNYG00000021047CPSF39087.269ENSLBEG00000020569cpsf37887.269Labrus_bergylta
ENSPNYG00000021047CPSF39083.764ENSLACG00000008308CPSF37883.764Latimeria_chalumnae
ENSPNYG00000021047CPSF39285.240ENSLOCG00000016823cpsf37893.002Lepisosteus_oculatus
ENSPNYG00000021047CPSF39191.344ENSLAFG00000009467CPSF38091.344Loxodonta_africana
ENSPNYG00000021047CPSF39191.529ENSMFAG00000001339CPSF38493.023Macaca_fascicularis
ENSPNYG00000021047CPSF39191.529ENSMMUG00000018038CPSF38491.529Macaca_mulatta
ENSPNYG00000021047CPSF39193.500ENSMNEG00000039447CPSF38593.500Macaca_nemestrina
ENSPNYG00000021047CPSF39191.529ENSMLEG00000026825CPSF38295.913Mandrillus_leucophaeus
ENSPNYG00000021047CPSF39291.818ENSMAMG00000003076cpsf39491.818Mastacembelus_armatus
ENSPNYG00000021047CPSF39298.185ENSMAMG00000008835CPSF38798.185Mastacembelus_armatus
ENSPNYG00000021047CPSF39191.971ENSMZEG00005014358cpsf38891.971Maylandia_zebra
ENSPNYG00000021047CPSF39299.818ENSMZEG00005006258CPSF38699.818Maylandia_zebra
ENSPNYG00000021047CPSF39190.608ENSMGAG00000013995CPSF38190.608Meleagris_gallopavo
ENSPNYG00000021047CPSF39185.451ENSMICG00000002363CPSF38485.451Microcebus_murinus
ENSPNYG00000021047CPSF39191.160ENSMOCG00000020067Cpsf38391.160Microtus_ochrogaster
ENSPNYG00000021047CPSF36880.851ENSMMOG00000011923CPSF36880.851Mola_mola
ENSPNYG00000021047CPSF39187.684ENSMMOG00000018212CPSF38587.684Mola_mola
ENSPNYG00000021047CPSF39587.652ENSMODG00000014703CPSF38387.652Monodelphis_domestica
ENSPNYG00000021047CPSF38898.485ENSMALG00000011474CPSF38698.485Monopterus_albus
ENSPNYG00000021047CPSF39292.196ENSMALG00000016416cpsf38892.196Monopterus_albus
ENSPNYG00000021047CPSF39190.792MGP_CAROLIEiJ_G0017640Cpsf37990.792Mus_caroli
ENSPNYG00000021047CPSF39190.792ENSMUSG00000054309Cpsf39293.722Mus_musculus
ENSPNYG00000021047CPSF39190.608MGP_PahariEiJ_G0029397Cpsf37990.608Mus_pahari
ENSPNYG00000021047CPSF39190.792MGP_SPRETEiJ_G0018481Cpsf37990.792Mus_spretus
ENSPNYG00000021047CPSF39191.529ENSMPUG00000013213CPSF37991.529Mustela_putorius_furo
ENSPNYG00000021047CPSF39191.544ENSMLUG00000010636CPSF37991.544Myotis_lucifugus
ENSPNYG00000021047CPSF39190.976ENSNGAG00000019836Cpsf37990.976Nannospalax_galili
ENSPNYG00000021047CPSF39299.818ENSNBRG00000010525CPSF38699.818Neolamprologus_brichardi
ENSPNYG00000021047CPSF39191.423ENSNBRG00000004770cpsf38891.423Neolamprologus_brichardi
ENSPNYG00000021047CPSF39191.529ENSNLEG00000013359CPSF38196.145Nomascus_leucogenys
ENSPNYG00000021047CPSF39160.405ENSMEUG00000013117-7960.405Notamacropus_eugenii
ENSPNYG00000021047CPSF39180.479ENSOPRG00000008902CPSF37980.479Ochotona_princeps
ENSPNYG00000021047CPSF39091.513ENSODEG00000003129CPSF37991.513Octodon_degus
ENSPNYG00000021047CPSF39091.697ENSONIG00000018812cpsf37991.697Oreochromis_niloticus
ENSPNYG00000021047CPSF38091.268ENSOANG00000008577CPSF38591.268Ornithorhynchus_anatinus
ENSPNYG00000021047CPSF39191.344ENSOCUG00000003728CPSF37991.344Oryctolagus_cuniculus
ENSPNYG00000021047CPSF39182.060ENSORLG00000018854cpsf37989.852Oryzias_latipes
ENSPNYG00000021047CPSF39190.511ENSORLG00020013331cpsf38990.511Oryzias_latipes_hni
ENSPNYG00000021047CPSF39290.364ENSORLG00015011017cpsf38890.364Oryzias_latipes_hsok
ENSPNYG00000021047CPSF39090.221ENSOMEG00000010647cpsf37590.221Oryzias_melastigma
ENSPNYG00000021047CPSF39179.190ENSOGAG00000001680CPSF37979.190Otolemur_garnettii
ENSPNYG00000021047CPSF39191.529ENSOARG00000015073CPSF37991.529Ovis_aries
ENSPNYG00000021047CPSF39191.529ENSPPAG00000042457CPSF38196.145Pan_paniscus
ENSPNYG00000021047CPSF39191.529ENSPPRG00000016790CPSF38491.529Panthera_pardus
ENSPNYG00000021047CPSF39191.529ENSPTIG00000003920CPSF38591.529Panthera_tigris_altaica
ENSPNYG00000021047CPSF39191.529ENSPTRG00000011638CPSF38196.145Pan_troglodytes
ENSPNYG00000021047CPSF39191.529ENSPANG00000016798CPSF38493.023Papio_anubis
ENSPNYG00000021047CPSF39394.245ENSPKIG00000023646cpsf38894.245Paramormyrops_kingsleyae
ENSPNYG00000021047CPSF39190.792ENSPSIG00000016144CPSF37990.792Pelodiscus_sinensis
ENSPNYG00000021047CPSF39292.015ENSPMGG00000006141-9592.015Periophthalmus_magnuspinnatus
ENSPNYG00000021047CPSF35395.597ENSPMGG00000015311CPSF37995.597Periophthalmus_magnuspinnatus
ENSPNYG00000021047CPSF39191.344ENSPEMG00000017668Cpsf37991.344Peromyscus_maniculatus_bairdii
ENSPNYG00000021047CPSF38088.041ENSPMAG00000004841cpsf38988.041Petromyzon_marinus
ENSPNYG00000021047CPSF39191.529ENSPCIG00000009823CPSF38191.529Phascolarctos_cinereus
ENSPNYG00000021047CPSF39187.375ENSPFOG00000010418-7895.756Poecilia_formosa
ENSPNYG00000021047CPSF39090.406ENSPFOG00000015922cpsf37990.406Poecilia_formosa
ENSPNYG00000021047CPSF35395.899ENSPLAG00000021300-7895.899Poecilia_latipinna
ENSPNYG00000021047CPSF39685.615ENSPLAG00000000882cpsf37990.406Poecilia_latipinna
ENSPNYG00000021047CPSF39090.590ENSPMEG00000018309cpsf37990.590Poecilia_mexicana
ENSPNYG00000021047CPSF39291.091ENSPREG00000014875cpsf38891.091Poecilia_reticulata
ENSPNYG00000021047CPSF38187.823ENSPREG00000004482CPSF37497.095Poecilia_reticulata
ENSPNYG00000021047CPSF39186.372ENSPPYG00000012666CPSF37886.372Pongo_abelii
ENSPNYG00000021047CPSF38065.281ENSPCAG00000015042CPSF37365.281Procavia_capensis
ENSPNYG00000021047CPSF37284.716ENSPCOG00000023016CPSF37184.716Propithecus_coquereli
ENSPNYG00000021047CPSF39191.529ENSPVAG00000005324CPSF37991.529Pteropus_vampyrus
ENSPNYG00000021047CPSF39293.260ENSPNAG00000023060cpsf38693.260Pygocentrus_nattereri
ENSPNYG00000021047CPSF39190.792ENSRNOG00000052418Cpsf37990.792Rattus_norvegicus
ENSPNYG00000021047CPSF39187.477ENSRBIG00000041615CPSF38387.477Rhinopithecus_bieti
ENSPNYG00000021047CPSF39191.529ENSRROG00000033792CPSF38091.529Rhinopithecus_roxellana
ENSPNYG00000021047CPSF38842.157YLR277CYSH17842.157Saccharomyces_cerevisiae
ENSPNYG00000021047CPSF39187.386ENSSBOG00000027263CPSF37987.386Saimiri_boliviensis_boliviensis
ENSPNYG00000021047CPSF39191.529ENSSHAG00000007024CPSF37991.529Sarcophilus_harrisii
ENSPNYG00000021047CPSF39294.727ENSSFOG00015002108cpsf38794.727Scleropages_formosus
ENSPNYG00000021047CPSF39288.430ENSSMAG00000020534CPSF38896.330Scophthalmus_maximus
ENSPNYG00000021047CPSF39298.548ENSSDUG00000018498CPSF38798.548Seriola_dumerili
ENSPNYG00000021047CPSF39091.144ENSSDUG00000002828cpsf37791.144Seriola_dumerili
ENSPNYG00000021047CPSF39298.195ENSSLDG00000005234CPSF38898.195Seriola_lalandi_dorsalis
ENSPNYG00000021047CPSF39091.144ENSSLDG00000008469cpsf38390.926Seriola_lalandi_dorsalis
ENSPNYG00000021047CPSF38081.081ENSSARG00000005186CPSF37081.081Sorex_araneus
ENSPNYG00000021047CPSF39188.406ENSSPUG00000015525CPSF38088.406Sphenodon_punctatus
ENSPNYG00000021047CPSF39298.182ENSSPAG00000002906CPSF38898.182Stegastes_partitus
ENSPNYG00000021047CPSF39183.887ENSSPAG00000018579cpsf37991.697Stegastes_partitus
ENSPNYG00000021047CPSF39092.950ENSSSCG00000020799CPSF38692.950Sus_scrofa
ENSPNYG00000021047CPSF39190.328ENSTGUG00000013016CPSF38090.328Taeniopygia_guttata
ENSPNYG00000021047CPSF35384.277ENSTRUG00000013905CPSF37884.277Takifugu_rubripes
ENSPNYG00000021047CPSF39183.389ENSTRUG00000007030cpsf37890.959Takifugu_rubripes
ENSPNYG00000021047CPSF36988.141ENSTBEG00000002707CPSF36388.141Tupaia_belangeri
ENSPNYG00000021047CPSF37774.490ENSTTRG00000000861CPSF36774.490Tursiops_truncatus
ENSPNYG00000021047CPSF39191.529ENSUAMG00000007535CPSF37891.529Ursus_americanus
ENSPNYG00000021047CPSF39191.529ENSUMAG00000003676CPSF39191.529Ursus_maritimus
ENSPNYG00000021047CPSF39091.513ENSVPAG00000008041CPSF38591.513Vicugna_pacos
ENSPNYG00000021047CPSF39191.529ENSVVUG00000002194CPSF37991.529Vulpes_vulpes
ENSPNYG00000021047CPSF39189.503ENSXETG00000008263cpsf37889.503Xenopus_tropicalis
ENSPNYG00000021047CPSF39190.625ENSXCOG00000019695cpsf37990.625Xiphophorus_couchianus
ENSPNYG00000021047CPSF39187.874ENSXMAG00000027291CPSF37896.125Xiphophorus_maculatus
ENSPNYG00000021047CPSF39090.775ENSXMAG00000009784cpsf38490.775Xiphophorus_maculatus

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