EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000021373 (Gene tree)
Gene ID: 102212898
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 26698 bases
Position: chrJH419249.1:3059610-3086307
Accession: 102212898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000028403	RRM_1	PF00076.22	3.3e-16	1	1
ENSPNYP00000028391	RRM_1	PF00076.22	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000029082	-	2636	XM_005731778	ENSPNYP00000028391	250 (aa)	XP_005731835	UPI0003AFD157
ENSPNYT00000029094	-	711	-	ENSPNYP00000028403	236 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000021373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000021373	rbm38	83	32.468	ENSPNYG00000002529	-	83	32.468
ENSPNYG00000021373	rbm38	82	36.842	ENSPNYG00000018393	msi2a	50	36.842
ENSPNYG00000021373	rbm38	65	67.296	ENSPNYG00000015684	rbm24b	100	56.962
ENSPNYG00000021373	rbm38	75	59.686	ENSPNYG00000011118	rbm24a	100	57.627
ENSPNYG00000021373	rbm38	98	63.745	ENSPNYG00000019727	-	100	82.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000021373	rbm38	97	58.750	ENSG00000132819	RBM38	94	80.342	Homo_sapiens
ENSPNYG00000021373	rbm38	100	94.000	ENSAPOG00000003301	rbm38	100	94.000	Acanthochromis_polyacanthus
ENSPNYG00000021373	rbm38	98	63.889	ENSAPOG00000009939	-	100	64.314	Acanthochromis_polyacanthus
ENSPNYG00000021373	rbm38	100	95.200	ENSACIG00000000010	rbm38	100	95.200	Amphilophus_citrinellus
ENSPNYG00000021373	rbm38	98	62.846	ENSACIG00000012502	-	100	82.906	Amphilophus_citrinellus
ENSPNYG00000021373	rbm38	100	94.000	ENSAOCG00000013497	-	100	94.000	Amphiprion_ocellaris
ENSPNYG00000021373	rbm38	95	64.167	ENSAOCG00000012559	RBM38	98	64.609	Amphiprion_ocellaris
ENSPNYG00000021373	rbm38	98	63.095	ENSAPEG00000023581	-	100	63.529	Amphiprion_percula
ENSPNYG00000021373	rbm38	100	94.000	ENSAPEG00000013137	rbm38	100	94.000	Amphiprion_percula
ENSPNYG00000021373	rbm38	98	64.286	ENSATEG00000016710	-	100	64.706	Anabas_testudineus
ENSPNYG00000021373	rbm38	100	88.400	ENSATEG00000016366	rbm38	100	88.400	Anabas_testudineus
ENSPNYG00000021373	rbm38	92	58.371	ENSACAG00000016238	RBM38	93	57.456	Anolis_carolinensis
ENSPNYG00000021373	rbm38	92	60.987	ENSANAG00000031959	RBM38	86	78.704	Aotus_nancymaae
ENSPNYG00000021373	rbm38	98	63.745	ENSACLG00000019514	-	100	63.745	Astatotilapia_calliptera
ENSPNYG00000021373	rbm38	95	55.462	ENSAMXG00000038120	rbm38	96	55.462	Astyanax_mexicanus
ENSPNYG00000021373	rbm38	98	60.800	ENSAMXG00000015601	-	100	60.800	Astyanax_mexicanus
ENSPNYG00000021373	rbm38	89	61.468	ENSBTAG00000008105	RBM38	89	61.111	Bos_taurus
ENSPNYG00000021373	rbm38	61	58.621	WBGene00006321	sup-12	57	80.233	Caenorhabditis_elegans
ENSPNYG00000021373	rbm38	98	58.159	ENSCJAG00000019139	RBM38	86	78.704	Callithrix_jacchus
ENSPNYG00000021373	rbm38	98	58.996	ENSCAFG00020021943	RBM38	96	58.650	Canis_lupus_dingo
ENSPNYG00000021373	rbm38	89	61.187	ENSCHIG00000002609	RBM38	89	60.185	Capra_hircus
ENSPNYG00000021373	rbm38	98	60.251	ENSCPOG00000012781	RBM38	96	59.494	Cavia_porcellus
ENSPNYG00000021373	rbm38	98	58.159	ENSCCAG00000036872	RBM38	86	78.704	Cebus_capucinus
ENSPNYG00000021373	rbm38	98	58.996	ENSCATG00000032133	RBM38	86	78.704	Cercocebus_atys
ENSPNYG00000021373	rbm38	98	59.833	ENSCLAG00000005906	RBM38	99	59.072	Chinchilla_lanigera
ENSPNYG00000021373	rbm38	98	58.996	ENSCSAG00000015503	RBM38	96	58.824	Chlorocebus_sabaeus
ENSPNYG00000021373	rbm38	93	58.824	ENSCPBG00000024059	RBM38	100	58.824	Chrysemys_picta_bellii
ENSPNYG00000021373	rbm38	63	61.146	ENSCING00000025102	-	66	59.873	Ciona_intestinalis
ENSPNYG00000021373	rbm38	64	58.228	ENSCSAVG00000001132	-	58	56.962	Ciona_savignyi
ENSPNYG00000021373	rbm38	97	47.458	ENSCANG00000030105	-	89	46.694	Colobus_angolensis_palliatus
ENSPNYG00000021373	rbm38	83	62.000	ENSCGRG00001012928	Rbm38	100	57.377	Cricetulus_griseus_chok1gshd
ENSPNYG00000021373	rbm38	98	64.542	ENSCSEG00000004701	-	100	63.889	Cynoglossus_semilaevis
ENSPNYG00000021373	rbm38	84	66.986	ENSCSEG00000020943	rbm38	68	66.986	Cynoglossus_semilaevis
ENSPNYG00000021373	rbm38	98	63.095	ENSCVAG00000005472	-	100	63.529	Cyprinodon_variegatus
ENSPNYG00000021373	rbm38	100	83.600	ENSCVAG00000015952	rbm38	100	83.600	Cyprinodon_variegatus
ENSPNYG00000021373	rbm38	98	63.158	ENSDARG00000058818	rbm38	100	63.158	Danio_rerio
ENSPNYG00000021373	rbm38	92	59.361	ENSDNOG00000032004	RBM38	98	59.813	Dasypus_novemcinctus
ENSPNYG00000021373	rbm38	98	58.577	ENSECAG00000007700	RBM38	99	56.967	Equus_caballus
ENSPNYG00000021373	rbm38	97	58.898	ENSEEUG00000013489	RBM38	93	58.798	Erinaceus_europaeus
ENSPNYG00000021373	rbm38	92	72.174	ENSELUG00000000585	-	100	72.174	Esox_lucius
ENSPNYG00000021373	rbm38	98	63.529	ENSELUG00000005849	-	100	63.529	Esox_lucius
ENSPNYG00000021373	rbm38	98	55.466	ENSFCAG00000042916	RBM38	86	77.778	Felis_catus
ENSPNYG00000021373	rbm38	74	67.797	ENSFALG00000010805	RBM38	93	64.516	Ficedula_albicollis
ENSPNYG00000021373	rbm38	100	84.861	ENSFHEG00000017748	rbm38	100	84.861	Fundulus_heteroclitus
ENSPNYG00000021373	rbm38	98	60.938	ENSFHEG00000006160	-	100	60.938	Fundulus_heteroclitus
ENSPNYG00000021373	rbm38	74	70.225	ENSGMOG00000016655	-	99	70.000	Gadus_morhua
ENSPNYG00000021373	rbm38	92	59.276	ENSGALG00000026081	RBM38	100	59.276	Gallus_gallus
ENSPNYG00000021373	rbm38	91	64.126	ENSGACG00000009873	-	100	63.229	Gasterosteus_aculeatus
ENSPNYG00000021373	rbm38	92	82.870	ENSGACG00000015224	rbm38	100	81.019	Gasterosteus_aculeatus
ENSPNYG00000021373	rbm38	93	59.664	ENSGAGG00000001187	RBM38	100	59.729	Gopherus_agassizii
ENSPNYG00000021373	rbm38	98	63.745	ENSHBUG00000011778	-	100	63.745	Haplochromis_burtoni
ENSPNYG00000021373	rbm38	100	99.600	ENSHBUG00000012058	rbm38	100	99.600	Haplochromis_burtoni
ENSPNYG00000021373	rbm38	92	58.772	ENSHGLG00000015077	RBM38	89	61.111	Heterocephalus_glaber_female
ENSPNYG00000021373	rbm38	100	61.753	ENSHCOG00000019040	rbm38	100	61.355	Hippocampus_comes
ENSPNYG00000021373	rbm38	84	66.038	ENSHCOG00000005622	-	59	66.981	Hippocampus_comes
ENSPNYG00000021373	rbm38	98	59.600	ENSIPUG00000019349	-	100	60.000	Ictalurus_punctatus
ENSPNYG00000021373	rbm38	91	74.043	ENSKMAG00000012402	rbm38	99	74.043	Kryptolebias_marmoratus
ENSPNYG00000021373	rbm38	100	88.400	ENSLBEG00000018878	rbm38	100	88.400	Labrus_bergylta
ENSPNYG00000021373	rbm38	98	61.753	ENSLBEG00000016163	RBM38	97	64.783	Labrus_bergylta
ENSPNYG00000021373	rbm38	98	64.919	ENSLOCG00000003456	rbm38	100	64.919	Lepisosteus_oculatus
ENSPNYG00000021373	rbm38	98	58.996	ENSMFAG00000043808	RBM38	86	78.704	Macaca_fascicularis
ENSPNYG00000021373	rbm38	98	58.996	ENSMMUG00000031391	RBM38	86	78.704	Macaca_mulatta
ENSPNYG00000021373	rbm38	98	58.996	ENSMNEG00000034683	RBM38	86	78.704	Macaca_nemestrina
ENSPNYG00000021373	rbm38	100	90.800	ENSMAMG00000024135	rbm38	100	90.800	Mastacembelus_armatus
ENSPNYG00000021373	rbm38	98	65.737	ENSMAMG00000020499	RBM38	100	66.142	Mastacembelus_armatus
ENSPNYG00000021373	rbm38	98	63.745	ENSMZEG00005000849	-	100	63.745	Maylandia_zebra
ENSPNYG00000021373	rbm38	100	99.600	ENSMZEG00005026036	rbm38	100	99.600	Maylandia_zebra
ENSPNYG00000021373	rbm38	100	58.025	ENSMAUG00000021211	Rbm38	100	58.197	Mesocricetus_auratus
ENSPNYG00000021373	rbm38	92	60.268	ENSMICG00000038011	RBM38	98	61.111	Microcebus_murinus
ENSPNYG00000021373	rbm38	100	58.025	ENSMOCG00000008715	Rbm38	100	58.197	Microtus_ochrogaster
ENSPNYG00000021373	rbm38	98	63.095	ENSMMOG00000020051	-	100	63.529	Mola_mola
ENSPNYG00000021373	rbm38	96	57.265	ENSMODG00000016458	RBM38	97	58.120	Monodelphis_domestica
ENSPNYG00000021373	rbm38	100	74.400	ENSMALG00000022327	rbm38	100	75.200	Monopterus_albus
ENSPNYG00000021373	rbm38	75	72.632	ENSMALG00000004680	RBM38	89	63.598	Monopterus_albus
ENSPNYG00000021373	rbm38	100	55.600	MGP_CAROLIEiJ_G0024745	Rbm38	100	57.202	Mus_caroli
ENSPNYG00000021373	rbm38	100	55.600	ENSMUSG00000027510	Rbm38	100	57.202	Mus_musculus
ENSPNYG00000021373	rbm38	100	55.600	MGP_PahariEiJ_G0026186	Rbm38	100	57.202	Mus_pahari
ENSPNYG00000021373	rbm38	100	55.600	MGP_SPRETEiJ_G0025665	Rbm38	100	57.202	Mus_spretus
ENSPNYG00000021373	rbm38	76	65.385	ENSMPUG00000006518	RBM38	98	60.976	Mustela_putorius_furo
ENSPNYG00000021373	rbm38	89	61.009	ENSMLUG00000011140	RBM38	98	59.722	Myotis_lucifugus
ENSPNYG00000021373	rbm38	100	98.800	ENSNBRG00000022685	rbm38	100	98.800	Neolamprologus_brichardi
ENSPNYG00000021373	rbm38	98	63.745	ENSNBRG00000022545	-	100	63.745	Neolamprologus_brichardi
ENSPNYG00000021373	rbm38	51	70.000	ENSMEUG00000005475	-	95	66.406	Notamacropus_eugenii
ENSPNYG00000021373	rbm38	98	60.251	ENSODEG00000007980	RBM38	96	59.494	Octodon_degus
ENSPNYG00000021373	rbm38	98	99.184	ENSONIG00000017073	rbm38	100	99.184	Oreochromis_niloticus
ENSPNYG00000021373	rbm38	98	63.600	ENSONIG00000020324	-	100	63.600	Oreochromis_niloticus
ENSPNYG00000021373	rbm38	93	57.778	ENSOANG00000009259	RBM38	85	57.778	Ornithorhynchus_anatinus
ENSPNYG00000021373	rbm38	98	61.417	ENSORLG00000027180	-	100	62.257	Oryzias_latipes
ENSPNYG00000021373	rbm38	100	81.673	ENSORLG00000012154	rbm38	100	81.673	Oryzias_latipes
ENSPNYG00000021373	rbm38	100	60.853	ENSORLG00020020751	-	100	62.257	Oryzias_latipes_hni
ENSPNYG00000021373	rbm38	100	81.673	ENSORLG00020017871	rbm38	100	81.673	Oryzias_latipes_hni
ENSPNYG00000021373	rbm38	98	61.660	ENSORLG00015017040	-	100	62.846	Oryzias_latipes_hsok
ENSPNYG00000021373	rbm38	100	81.673	ENSORLG00015012606	rbm38	100	81.673	Oryzias_latipes_hsok
ENSPNYG00000021373	rbm38	98	62.698	ENSOMEG00000023912	-	100	63.492	Oryzias_melastigma
ENSPNYG00000021373	rbm38	100	80.876	ENSOMEG00000006805	rbm38	100	80.876	Oryzias_melastigma
ENSPNYG00000021373	rbm38	97	58.750	ENSOGAG00000029136	RBM38	99	57.377	Otolemur_garnettii
ENSPNYG00000021373	rbm38	98	55.466	ENSPPRG00000009507	RBM38	86	77.778	Panthera_pardus
ENSPNYG00000021373	rbm38	76	65.385	ENSPTRG00000013661	RBM38	88	78.899	Pan_troglodytes
ENSPNYG00000021373	rbm38	61	71.034	ENSPTRG00000045845	-	77	71.034	Pan_troglodytes
ENSPNYG00000021373	rbm38	97	48.085	ENSPANG00000033127	-	97	47.458	Papio_anubis
ENSPNYG00000021373	rbm38	98	58.996	ENSPANG00000020919	-	86	78.704	Papio_anubis
ENSPNYG00000021373	rbm38	98	60.317	ENSPKIG00000025417	rbm38	100	62.109	Paramormyrops_kingsleyae
ENSPNYG00000021373	rbm38	98	58.400	ENSPKIG00000018122	-	100	79.487	Paramormyrops_kingsleyae
ENSPNYG00000021373	rbm38	99	56.067	ENSPSIG00000011649	RBM38	100	56.067	Pelodiscus_sinensis
ENSPNYG00000021373	rbm38	100	77.689	ENSPMGG00000011343	rbm38	100	80.080	Periophthalmus_magnuspinnatus
ENSPNYG00000021373	rbm38	98	59.843	ENSPMGG00000017094	-	100	60.236	Periophthalmus_magnuspinnatus
ENSPNYG00000021373	rbm38	93	59.556	ENSPCIG00000013648	RBM38	94	59.556	Phascolarctos_cinereus
ENSPNYG00000021373	rbm38	100	85.433	ENSPFOG00000011658	rbm38	100	85.433	Poecilia_formosa
ENSPNYG00000021373	rbm38	100	85.039	ENSPLAG00000005218	rbm38	100	85.039	Poecilia_latipinna
ENSPNYG00000021373	rbm38	98	62.500	ENSPLAG00000002500	-	100	63.745	Poecilia_latipinna
ENSPNYG00000021373	rbm38	100	85.827	ENSPMEG00000015770	rbm38	100	85.827	Poecilia_mexicana
ENSPNYG00000021373	rbm38	100	85.039	ENSPREG00000007398	rbm38	100	85.039	Poecilia_reticulata
ENSPNYG00000021373	rbm38	97	58.506	ENSPCOG00000026201	RBM38	89	77.982	Propithecus_coquereli
ENSPNYG00000021373	rbm38	98	39.095	ENSPVAG00000006457	RBM38	96	39.662	Pteropus_vampyrus
ENSPNYG00000021373	rbm38	95	60.251	ENSPNAG00000010596	rbm38	96	60.251	Pygocentrus_nattereri
ENSPNYG00000021373	rbm38	98	61.600	ENSPNAG00000015123	-	91	80.508	Pygocentrus_nattereri
ENSPNYG00000021373	rbm38	100	58.776	ENSRNOG00000006420	Rbm38	100	57.202	Rattus_norvegicus
ENSPNYG00000021373	rbm38	97	51.695	ENSRROG00000036388	-	97	51.695	Rhinopithecus_roxellana
ENSPNYG00000021373	rbm38	92	60.090	ENSSBOG00000031053	RBM38	85	86.957	Saimiri_boliviensis_boliviensis
ENSPNYG00000021373	rbm38	98	56.400	ENSSFOG00015004453	rbm38	100	60.400	Scleropages_formosus
ENSPNYG00000021373	rbm38	98	64.286	ENSSDUG00000021082	RBM38	100	65.098	Seriola_dumerili
ENSPNYG00000021373	rbm38	100	93.200	ENSSDUG00000022611	rbm38	100	93.200	Seriola_dumerili
ENSPNYG00000021373	rbm38	98	64.286	ENSSLDG00000011778	RBM38	100	65.098	Seriola_lalandi_dorsalis
ENSPNYG00000021373	rbm38	100	93.200	ENSSLDG00000010845	rbm38	100	93.200	Seriola_lalandi_dorsalis
ENSPNYG00000021373	rbm38	98	64.286	ENSSPAG00000020989	RBM38	100	64.314	Stegastes_partitus
ENSPNYG00000021373	rbm38	100	94.400	ENSSPAG00000011113	rbm38	100	94.400	Stegastes_partitus
ENSPNYG00000021373	rbm38	98	59.414	ENSSSCG00000007504	RBM38	96	58.650	Sus_scrofa
ENSPNYG00000021373	rbm38	98	61.905	ENSTRUG00000019869	-	100	61.508	Takifugu_rubripes
ENSPNYG00000021373	rbm38	100	82.800	ENSTRUG00000024954	rbm38	100	83.600	Takifugu_rubripes
ENSPNYG00000021373	rbm38	92	65.044	ENSTNIG00000007093	-	100	65.044	Tetraodon_nigroviridis
ENSPNYG00000021373	rbm38	98	55.466	ENSUAMG00000019780	RBM38	96	58.650	Ursus_americanus
ENSPNYG00000021373	rbm38	98	58.996	ENSVVUG00000017246	RBM38	96	58.650	Vulpes_vulpes
ENSPNYG00000021373	rbm38	92	57.991	ENSXETG00000011268	rbm38	99	59.375	Xenopus_tropicalis
ENSPNYG00000021373	rbm38	53	76.154	ENSXCOG00000017324	-	62	72.794	Xiphophorus_couchianus
ENSPNYG00000021373	rbm38	100	87.200	ENSXMAG00000023662	rbm38	100	87.200	Xiphophorus_maculatus