EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000021576 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5334 bases
Position: chrJH419356.1:1442771-1448104
Accession: 102213029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000028648	zf-C2H2	PF00096.26	2.1e-16	1	1
ENSPNYP00000028648	zf-met	PF12874.7	2.4e-10	1	2
ENSPNYP00000028648	zf-met	PF12874.7	2.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000029346	-	3441	XM_005744944	ENSPNYP00000028648	1146 (aa)	XP_005745001	-

Gene Model

Click here to download ENSPNYG00000021576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000021576	si:ch211-212k18.5	100	76.299	ENSAPOG00000013387	si:ch211-212k18.5	100	75.974	Acanthochromis_polyacanthus
ENSPNYG00000021576	si:ch211-212k18.5	80	86.200	ENSACIG00000019922	si:ch211-212k18.5	99	86.186	Amphilophus_citrinellus
ENSPNYG00000021576	si:ch211-212k18.5	100	79.156	ENSAOCG00000010737	si:ch211-212k18.5	100	79.831	Amphiprion_ocellaris
ENSPNYG00000021576	si:ch211-212k18.5	100	78.819	ENSAPEG00000006751	si:ch211-212k18.5	100	79.578	Amphiprion_percula
ENSPNYG00000021576	si:ch211-212k18.5	77	78.246	ENSATEG00000001254	si:ch211-212k18.5	100	78.588	Anabas_testudineus
ENSPNYG00000021576	si:ch211-212k18.5	97	98.108	ENSACLG00000009709	si:ch211-212k18.5	97	98.108	Astatotilapia_calliptera
ENSPNYG00000021576	si:ch211-212k18.5	99	54.758	ENSAMXG00000010979	si:ch211-212k18.5	99	54.395	Astyanax_mexicanus
ENSPNYG00000021576	si:ch211-212k18.5	99	67.640	ENSCSEG00000004426	si:ch211-212k18.5	99	67.153	Cynoglossus_semilaevis
ENSPNYG00000021576	si:ch211-212k18.5	73	61.818	ENSCSEG00000021148	sall2	58	50.370	Cynoglossus_semilaevis
ENSPNYG00000021576	si:ch211-212k18.5	99	68.309	ENSCVAG00000007475	si:ch211-212k18.5	99	68.167	Cyprinodon_variegatus
ENSPNYG00000021576	si:ch211-212k18.5	67	46.198	ENSDARG00000075116	sall2	65	49.266	Danio_rerio
ENSPNYG00000021576	si:ch211-212k18.5	96	56.245	ENSDARG00000103316	si:ch211-212k18.5	96	55.824	Danio_rerio
ENSPNYG00000021576	si:ch211-212k18.5	99	56.522	ENSELUG00000024534	si:ch211-212k18.5	97	59.358	Esox_lucius
ENSPNYG00000021576	si:ch211-212k18.5	69	48.611	ENSELUG00000004389	sall2	66	51.502	Esox_lucius
ENSPNYG00000021576	si:ch211-212k18.5	99	70.414	ENSFHEG00000017264	si:ch211-212k18.5	99	70.798	Fundulus_heteroclitus
ENSPNYG00000021576	si:ch211-212k18.5	99	68.683	ENSGAFG00000003746	si:ch211-212k18.5	99	68.745	Gambusia_affinis
ENSPNYG00000021576	si:ch211-212k18.5	95	99.724	ENSHBUG00000019672	si:ch211-212k18.5	96	99.724	Haplochromis_burtoni
ENSPNYG00000021576	si:ch211-212k18.5	97	62.282	ENSHCOG00000002842	si:ch211-212k18.5	99	60.851	Hippocampus_comes
ENSPNYG00000021576	si:ch211-212k18.5	99	53.179	ENSIPUG00000002559	sall2	99	52.181	Ictalurus_punctatus
ENSPNYG00000021576	si:ch211-212k18.5	52	44.947	ENSKMAG00000020172	sall2	53	52.941	Kryptolebias_marmoratus
ENSPNYG00000021576	si:ch211-212k18.5	99	70.008	ENSKMAG00000019657	si:ch211-212k18.5	99	69.212	Kryptolebias_marmoratus
ENSPNYG00000021576	si:ch211-212k18.5	100	69.756	ENSLBEG00000020887	si:ch211-212k18.5	100	68.862	Labrus_bergylta
ENSPNYG00000021576	si:ch211-212k18.5	53	46.538	ENSMAMG00000016229	sall2	55	50.588	Mastacembelus_armatus
ENSPNYG00000021576	si:ch211-212k18.5	70	81.374	ENSMAMG00000015887	si:ch211-212k18.5	99	80.653	Mastacembelus_armatus
ENSPNYG00000021576	si:ch211-212k18.5	95	99.724	ENSMZEG00005021214	si:ch211-212k18.5	96	99.724	Maylandia_zebra
ENSPNYG00000021576	si:ch211-212k18.5	92	80.708	ENSMMOG00000012726	si:ch211-212k18.5	100	80.479	Mola_mola
ENSPNYG00000021576	si:ch211-212k18.5	92	73.264	ENSMALG00000000979	si:ch211-212k18.5	98	72.155	Monopterus_albus
ENSPNYG00000021576	si:ch211-212k18.5	97	94.789	ENSNBRG00000023948	si:ch211-212k18.5	99	94.789	Neolamprologus_brichardi
ENSPNYG00000021576	si:ch211-212k18.5	69	46.074	ENSNBRG00000017645	sall2	76	46.412	Neolamprologus_brichardi
ENSPNYG00000021576	si:ch211-212k18.5	99	67.993	ENSORLG00000030429	si:ch211-212k18.5	99	66.944	Oryzias_latipes
ENSPNYG00000021576	si:ch211-212k18.5	99	67.851	ENSORLG00020008145	si:ch211-212k18.5	99	67.025	Oryzias_latipes_hni
ENSPNYG00000021576	si:ch211-212k18.5	99	67.662	ENSORLG00015004982	si:ch211-212k18.5	99	66.860	Oryzias_latipes_hsok
ENSPNYG00000021576	si:ch211-212k18.5	100	66.776	ENSOMEG00000013949	si:ch211-212k18.5	100	65.528	Oryzias_melastigma
ENSPNYG00000021576	si:ch211-212k18.5	94	66.133	ENSPMGG00000018714	si:ch211-212k18.5	99	64.216	Periophthalmus_magnuspinnatus
ENSPNYG00000021576	si:ch211-212k18.5	99	69.205	ENSPFOG00000023705	si:ch211-212k18.5	100	70.070	Poecilia_formosa
ENSPNYG00000021576	si:ch211-212k18.5	99	69.497	ENSPLAG00000002577	si:ch211-212k18.5	99	69.212	Poecilia_latipinna
ENSPNYG00000021576	si:ch211-212k18.5	99	68.894	ENSPMEG00000016395	si:ch211-212k18.5	100	69.983	Poecilia_mexicana
ENSPNYG00000021576	si:ch211-212k18.5	99	68.602	ENSPREG00000005292	si:ch211-212k18.5	99	69.130	Poecilia_reticulata
ENSPNYG00000021576	si:ch211-212k18.5	99	55.684	ENSPNAG00000006123	si:ch211-212k18.5	99	54.627	Pygocentrus_nattereri
ENSPNYG00000021576	si:ch211-212k18.5	100	74.566	ENSSMAG00000006241	si:ch211-212k18.5	100	73.906	Scophthalmus_maximus
ENSPNYG00000021576	si:ch211-212k18.5	100	77.714	ENSSDUG00000006164	si:ch211-212k18.5	100	77.467	Seriola_dumerili
ENSPNYG00000021576	si:ch211-212k18.5	100	78.207	ENSSLDG00000003393	si:ch211-212k18.5	100	77.796	Seriola_lalandi_dorsalis
ENSPNYG00000021576	si:ch211-212k18.5	97	78.915	ENSSPAG00000013435	si:ch211-212k18.5	99	79.178	Stegastes_partitus
ENSPNYG00000021576	si:ch211-212k18.5	89	77.203	ENSTRUG00000025082	si:ch211-212k18.5	97	72.445	Takifugu_rubripes
ENSPNYG00000021576	si:ch211-212k18.5	99	71.260	ENSXCOG00000000762	si:ch211-212k18.5	99	71.106	Xiphophorus_couchianus
ENSPNYG00000021576	si:ch211-212k18.5	99	69.403	ENSXMAG00000001461	si:ch211-212k18.5	99	69.704	Xiphophorus_maculatus