EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000021642 (Gene tree)
Gene ID: 102192074
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 9818 bases
Position: chrJH419218.1:825012-834829
Accession: 102192074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000028747	SAP	PF02037.27	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000029448	-	4923	XM_005724812	ENSPNYP00000028747	798 (aa)	XP_005724869	UPI0003AF6BA1
ENSPNYT00000029475	-	1659	-	ENSPNYP00000028773	552 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000021642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000021642	hnrnpub	86	40.746	ENSPNYG00000007583	HNRNPUL1	98	38.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000021642	hnrnpub	85	83.333	ENSG00000153187	HNRNPU	99	65.000	Homo_sapiens
ENSPNYG00000021642	hnrnpub	100	86.493	ENSAPOG00000017400	hnrnpub	100	85.980	Acanthochromis_polyacanthus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSPNYG00000021642	hnrnpub	100	84.856	ENSACIG00000012138	hnrnpub	96	91.517	Amphilophus_citrinellus
ENSPNYG00000021642	hnrnpub	100	88.228	ENSAOCG00000015843	hnrnpub	100	87.221	Amphiprion_ocellaris
ENSPNYG00000021642	hnrnpub	100	88.228	ENSAPEG00000014679	hnrnpub	100	87.221	Amphiprion_percula
ENSPNYG00000021642	hnrnpub	98	87.469	ENSATEG00000016178	hnrnpub	97	86.055	Anabas_testudineus
ENSPNYG00000021642	hnrnpub	86	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSPNYG00000021642	hnrnpub	80	57.410	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSPNYG00000021642	hnrnpub	100	99.624	ENSACLG00000008165	hnrnpub	100	99.624	Astatotilapia_calliptera
ENSPNYG00000021642	hnrnpub	85	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSPNYG00000021642	hnrnpub	80	57.903	ENSCAFG00020000918	HNRNPU	75	57.640	Canis_lupus_dingo
ENSPNYG00000021642	hnrnpub	80	57.746	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSPNYG00000021642	hnrnpub	85	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSPNYG00000021642	hnrnpub	85	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSPNYG00000021642	hnrnpub	80	57.410	ENSCSAG00000009219	HNRNPU	75	57.640	Chlorocebus_sabaeus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSPNYG00000021642	hnrnpub	96	56.753	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSPNYG00000021642	hnrnpub	85	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSPNYG00000021642	hnrnpub	86	78.723	ENSCGRG00001020525	Hnrnpu	77	78.723	Cricetulus_griseus_chok1gshd
ENSPNYG00000021642	hnrnpub	100	77.605	ENSCSEG00000010804	hnrnpub	100	79.162	Cynoglossus_semilaevis
ENSPNYG00000021642	hnrnpub	92	81.481	ENSCVAG00000004280	hnrnpub	100	70.954	Cyprinodon_variegatus
ENSPNYG00000021642	hnrnpub	100	61.347	ENSDARG00000015206	hnrnpua	100	59.429	Danio_rerio
ENSPNYG00000021642	hnrnpub	100	60.000	ENSDARG00000004735	hnrnpub	83	64.076	Danio_rerio
ENSPNYG00000021642	hnrnpub	99	52.250	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSPNYG00000021642	hnrnpub	80	56.383	ENSDORG00000015491	Hnrnpu	74	58.567	Dipodomys_ordii
ENSPNYG00000021642	hnrnpub	85	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSPNYG00000021642	hnrnpub	81	57.538	ENSEASG00005003017	HNRNPU	75	57.293	Equus_asinus_asinus
ENSPNYG00000021642	hnrnpub	81	57.385	ENSECAG00000007955	HNRNPU	75	57.143	Equus_caballus
ENSPNYG00000021642	hnrnpub	100	73.050	ENSELUG00000010733	hnrnpub	100	73.059	Esox_lucius
ENSPNYG00000021642	hnrnpub	80	56.079	ENSFCAG00000002156	HNRNPU	74	57.640	Felis_catus
ENSPNYG00000021642	hnrnpub	94	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSPNYG00000021642	hnrnpub	100	80.387	ENSFHEG00000022639	hnrnpub	100	80.751	Fundulus_heteroclitus
ENSPNYG00000021642	hnrnpub	100	72.289	ENSGMOG00000001755	hnrnpub	99	71.758	Gadus_morhua
ENSPNYG00000021642	hnrnpub	73	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSPNYG00000021642	hnrnpub	100	80.383	ENSGAFG00000009369	hnrnpub	100	79.952	Gambusia_affinis
ENSPNYG00000021642	hnrnpub	100	75.117	ENSGACG00000004679	hnrnpub	99	75.350	Gasterosteus_aculeatus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSGGOG00000004061	HNRNPU	78	83.333	Gorilla_gorilla
ENSPNYG00000021642	hnrnpub	100	99.624	ENSHBUG00000012290	hnrnpub	100	99.624	Haplochromis_burtoni
ENSPNYG00000021642	hnrnpub	85	85.714	ENSHGLG00000010594	-	76	85.714	Heterocephalus_glaber_female
ENSPNYG00000021642	hnrnpub	92	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSPNYG00000021642	hnrnpub	85	77.114	ENSHCOG00000020091	hnrnpub	100	74.668	Hippocampus_comes
ENSPNYG00000021642	hnrnpub	80	91.304	ENSIPUG00000007749	hnrnpu	93	78.947	Ictalurus_punctatus
ENSPNYG00000021642	hnrnpub	86	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSPNYG00000021642	hnrnpub	100	82.518	ENSKMAG00000004532	hnrnpub	100	82.518	Kryptolebias_marmoratus
ENSPNYG00000021642	hnrnpub	100	83.741	ENSLBEG00000022520	hnrnpub	100	85.452	Labrus_bergylta
ENSPNYG00000021642	hnrnpub	81	53.120	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSPNYG00000021642	hnrnpub	88	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSPNYG00000021642	hnrnpub	85	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSPNYG00000021642	hnrnpub	80	57.410	ENSMMUG00000021098	HNRNPU	75	57.640	Macaca_mulatta
ENSPNYG00000021642	hnrnpub	85	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSPNYG00000021642	hnrnpub	100	87.376	ENSMAMG00000007196	hnrnpub	100	87.252	Mastacembelus_armatus
ENSPNYG00000021642	hnrnpub	100	99.624	ENSMZEG00005003185	hnrnpub	100	99.624	Maylandia_zebra
ENSPNYG00000021642	hnrnpub	88	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSMICG00000004616	HNRNPU	78	83.333	Microcebus_murinus
ENSPNYG00000021642	hnrnpub	88	78.723	ENSMOCG00000015623	Hnrnpu	79	78.723	Microtus_ochrogaster
ENSPNYG00000021642	hnrnpub	85	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSPNYG00000021642	hnrnpub	96	87.322	ENSMALG00000018243	hnrnpub	98	86.511	Monopterus_albus
ENSPNYG00000021642	hnrnpub	86	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSPNYG00000021642	hnrnpub	86	78.723	ENSMUSG00000039630	Hnrnpu	79	78.723	Mus_musculus
ENSPNYG00000021642	hnrnpub	85	80.952	ENSMLUG00000000475	HNRNPU	80	77.083	Myotis_lucifugus
ENSPNYG00000021642	hnrnpub	80	56.383	ENSNGAG00000019075	Hnrnpu	75	57.640	Nannospalax_galili
ENSPNYG00000021642	hnrnpub	100	99.248	ENSNBRG00000017855	hnrnpub	100	99.248	Neolamprologus_brichardi
ENSPNYG00000021642	hnrnpub	78	83.333	ENSMEUG00000000541	HNRNPU	90	83.333	Notamacropus_eugenii
ENSPNYG00000021642	hnrnpub	100	95.739	ENSONIG00000001260	hnrnpub	100	95.739	Oreochromis_niloticus
ENSPNYG00000021642	hnrnpub	83	83.333	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSPNYG00000021642	hnrnpub	100	82.324	ENSORLG00000016114	hnrnpub	100	82.695	Oryzias_latipes
ENSPNYG00000021642	hnrnpub	100	81.413	ENSORLG00020005363	hnrnpub	100	83.066	Oryzias_latipes_hni
ENSPNYG00000021642	hnrnpub	100	81.413	ENSORLG00015001190	hnrnpub	100	82.942	Oryzias_latipes_hsok
ENSPNYG00000021642	hnrnpub	100	82.156	ENSOMEG00000014951	hnrnpub	100	82.447	Oryzias_melastigma
ENSPNYG00000021642	hnrnpub	80	57.903	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSPNYG00000021642	hnrnpub	85	83.333	ENSOARG00000004985	HNRNPU	85	83.333	Ovis_aries
ENSPNYG00000021642	hnrnpub	85	83.333	ENSPPAG00000038652	HNRNPU	81	83.333	Pan_paniscus
ENSPNYG00000021642	hnrnpub	87	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSPTRG00000002182	HNRNPU	81	83.333	Pan_troglodytes
ENSPNYG00000021642	hnrnpub	80	57.410	ENSPANG00000011643	HNRNPU	79	60.585	Papio_anubis
ENSPNYG00000021642	hnrnpub	100	68.727	ENSPKIG00000022332	hnrnpub	100	67.442	Paramormyrops_kingsleyae
ENSPNYG00000021642	hnrnpub	100	67.275	ENSPKIG00000006885	hnrnpua	100	65.614	Paramormyrops_kingsleyae
ENSPNYG00000021642	hnrnpub	85	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSPNYG00000021642	hnrnpub	100	81.829	ENSPFOG00000002908	hnrnpub	100	82.439	Poecilia_formosa
ENSPNYG00000021642	hnrnpub	100	81.341	ENSPLAG00000004160	hnrnpub	100	82.195	Poecilia_latipinna
ENSPNYG00000021642	hnrnpub	80	56.651	ENSPCOG00000003883	-	77	56.193	Propithecus_coquereli
ENSPNYG00000021642	hnrnpub	85	83.333	ENSPCOG00000018655	-	80	83.333	Propithecus_coquereli
ENSPNYG00000021642	hnrnpub	85	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSPNYG00000021642	hnrnpub	100	67.072	ENSPNAG00000001055	hnrnpub	100	66.503	Pygocentrus_nattereri
ENSPNYG00000021642	hnrnpub	80	53.221	ENSRNOG00000033790	Hnrnpu	75	57.791	Rattus_norvegicus
ENSPNYG00000021642	hnrnpub	80	56.786	ENSRBIG00000031519	HNRNPU	78	59.897	Rhinopithecus_bieti
ENSPNYG00000021642	hnrnpub	82	56.410	ENSRROG00000041642	HNRNPU	76	61.728	Rhinopithecus_roxellana
ENSPNYG00000021642	hnrnpub	100	67.879	ENSSFOG00015001124	hnrnpub	82	73.343	Scleropages_formosus
ENSPNYG00000021642	hnrnpub	100	65.981	ENSSFOG00015019004	hnrnpu	99	63.364	Scleropages_formosus
ENSPNYG00000021642	hnrnpub	100	80.737	ENSSMAG00000003607	hnrnpub	100	82.283	Scophthalmus_maximus
ENSPNYG00000021642	hnrnpub	100	87.377	ENSSDUG00000005912	hnrnpub	100	88.113	Seriola_dumerili
ENSPNYG00000021642	hnrnpub	100	87.057	ENSSLDG00000004899	hnrnpub	100	86.935	Seriola_lalandi_dorsalis
ENSPNYG00000021642	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	89	58.485	Sphenodon_punctatus
ENSPNYG00000021642	hnrnpub	100	87.469	ENSSPAG00000011853	hnrnpub	100	87.097	Stegastes_partitus
ENSPNYG00000021642	hnrnpub	85	83.333	ENSSSCG00000010877	HNRNPU	78	83.333	Sus_scrofa
ENSPNYG00000021642	hnrnpub	100	78.250	ENSTRUG00000007759	hnrnpub	100	79.365	Takifugu_rubripes
ENSPNYG00000021642	hnrnpub	85	83.333	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSPNYG00000021642	hnrnpub	85	74.419	ENSUMAG00000012322	HNRNPU	83	74.419	Ursus_maritimus
ENSPNYG00000021642	hnrnpub	78	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSPNYG00000021642	hnrnpub	80	57.903	ENSVVUG00000026524	HNRNPU	75	57.640	Vulpes_vulpes
ENSPNYG00000021642	hnrnpub	99	50.000	ENSXETG00000011386	hnrnpu	77	54.197	Xenopus_tropicalis
ENSPNYG00000021642	hnrnpub	100	83.171	ENSXMAG00000010356	hnrnpub	100	83.659	Xiphophorus_maculatus