EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000021745 (Gene tree)
Gene ID: 102212251
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5467 bases
Position: chrJH419270.1:150101-155567
Accession: 102212251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000028875	EXOSC1	PF10447.9	1.6e-15	1	1
ENSPNYP00000028882	EXOSC1	PF10447.9	7.2e-13	1	1
ENSPNYP00000028882	ECR1_N	PF14382.6	4.5e-12	1	1
ENSPNYP00000028875	ECR1_N	PF14382.6	5.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000029581	-	1433	XM_005735669	ENSPNYP00000028875	194 (aa)	XP_005735726	UPI00032A04E4
ENSPNYT00000029588	-	513	-	ENSPNYP00000028882	170 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000021745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000021745	exosc1	98	80.105	ENSG00000171311	EXOSC1	98	80.105	Homo_sapiens
ENSPNYG00000021745	exosc1	100	98.454	ENSAPOG00000007822	exosc1	100	98.454	Acanthochromis_polyacanthus
ENSPNYG00000021745	exosc1	98	80.628	ENSAMEG00000000129	EXOSC1	98	80.628	Ailuropoda_melanoleuca
ENSPNYG00000021745	exosc1	95	99.459	ENSACIG00000018956	exosc1	91	99.459	Amphilophus_citrinellus
ENSPNYG00000021745	exosc1	100	98.454	ENSAOCG00000010699	exosc1	100	98.454	Amphiprion_ocellaris
ENSPNYG00000021745	exosc1	93	86.667	ENSAPEG00000012690	exosc1	97	86.667	Amphiprion_percula
ENSPNYG00000021745	exosc1	100	98.454	ENSATEG00000018683	exosc1	100	98.454	Anabas_testudineus
ENSPNYG00000021745	exosc1	96	78.075	ENSACAG00000002101	EXOSC1	96	78.075	Anolis_carolinensis
ENSPNYG00000021745	exosc1	98	80.105	ENSANAG00000034669	EXOSC1	98	80.105	Aotus_nancymaae
ENSPNYG00000021745	exosc1	100	100.000	ENSACLG00000021243	exosc1	100	100.000	Astatotilapia_calliptera
ENSPNYG00000021745	exosc1	100	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSPNYG00000021745	exosc1	98	80.628	ENSBTAG00000012699	EXOSC1	98	80.628	Bos_taurus
ENSPNYG00000021745	exosc1	94	35.602	WBGene00012966	exos-1	92	35.602	Caenorhabditis_elegans
ENSPNYG00000021745	exosc1	98	79.581	ENSCJAG00000016586	EXOSC1	98	79.581	Callithrix_jacchus
ENSPNYG00000021745	exosc1	98	80.105	ENSCAFG00000009068	EXOSC1	92	80.105	Canis_familiaris
ENSPNYG00000021745	exosc1	98	80.105	ENSCAFG00020006002	EXOSC1	92	80.105	Canis_lupus_dingo
ENSPNYG00000021745	exosc1	98	80.628	ENSCHIG00000015253	EXOSC1	98	80.628	Capra_hircus
ENSPNYG00000021745	exosc1	98	79.058	ENSTSYG00000000760	EXOSC1	98	79.058	Carlito_syrichta
ENSPNYG00000021745	exosc1	98	80.105	ENSCPOG00000001173	EXOSC1	98	80.105	Cavia_porcellus
ENSPNYG00000021745	exosc1	98	45.783	ENSCCAG00000023986	EXOSC1	97	45.783	Cebus_capucinus
ENSPNYG00000021745	exosc1	98	80.105	ENSCATG00000034114	EXOSC1	98	80.105	Cercocebus_atys
ENSPNYG00000021745	exosc1	98	80.105	ENSCLAG00000002463	EXOSC1	98	80.105	Chinchilla_lanigera
ENSPNYG00000021745	exosc1	98	79.581	ENSCSAG00000005870	EXOSC1	98	79.581	Chlorocebus_sabaeus
ENSPNYG00000021745	exosc1	95	67.391	ENSCHOG00000006477	EXOSC1	98	67.391	Choloepus_hoffmanni
ENSPNYG00000021745	exosc1	55	67.290	ENSCPBG00000011949	EXOSC1	88	67.290	Chrysemys_picta_bellii
ENSPNYG00000021745	exosc1	99	50.777	ENSCING00000022734	-	92	50.777	Ciona_intestinalis
ENSPNYG00000021745	exosc1	99	54.404	ENSCSAVG00000010865	-	98	54.404	Ciona_savignyi
ENSPNYG00000021745	exosc1	98	80.105	ENSCANG00000034159	EXOSC1	98	80.105	Colobus_angolensis_palliatus
ENSPNYG00000021745	exosc1	98	79.058	ENSCGRG00001000335	Exosc1	98	79.058	Cricetulus_griseus_chok1gshd
ENSPNYG00000021745	exosc1	98	79.058	ENSCGRG00000011602	Exosc1	98	79.058	Cricetulus_griseus_crigri
ENSPNYG00000021745	exosc1	100	94.706	ENSCSEG00000007895	exosc1	97	94.706	Cynoglossus_semilaevis
ENSPNYG00000021745	exosc1	100	88.144	ENSCVAG00000016748	exosc1	100	88.144	Cyprinodon_variegatus
ENSPNYG00000021745	exosc1	100	94.330	ENSDARG00000059841	exosc1	100	94.330	Danio_rerio
ENSPNYG00000021745	exosc1	74	76.552	ENSDNOG00000007983	EXOSC1	98	76.552	Dasypus_novemcinctus
ENSPNYG00000021745	exosc1	98	79.581	ENSDORG00000016528	Exosc1	98	79.581	Dipodomys_ordii
ENSPNYG00000021745	exosc1	95	47.895	FBgn0032346	Csl4	92	47.895	Drosophila_melanogaster
ENSPNYG00000021745	exosc1	98	78.534	ENSETEG00000002469	-	98	78.534	Echinops_telfairi
ENSPNYG00000021745	exosc1	97	65.625	ENSEBUG00000008164	exosc1	96	65.625	Eptatretus_burgeri
ENSPNYG00000021745	exosc1	98	71.739	ENSEASG00005008684	EXOSC1	98	71.739	Equus_asinus_asinus
ENSPNYG00000021745	exosc1	60	56.034	ENSECAG00000010621	EXOSC1	69	56.034	Equus_caballus
ENSPNYG00000021745	exosc1	98	79.058	ENSEEUG00000005647	EXOSC1	98	79.058	Erinaceus_europaeus
ENSPNYG00000021745	exosc1	99	91.371	ENSELUG00000017369	exosc1	100	88.372	Esox_lucius
ENSPNYG00000021745	exosc1	98	80.628	ENSFCAG00000040563	EXOSC1	98	78.916	Felis_catus
ENSPNYG00000021745	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSPNYG00000021745	exosc1	98	80.628	ENSFDAG00000000846	EXOSC1	98	80.628	Fukomys_damarensis
ENSPNYG00000021745	exosc1	100	88.660	ENSFHEG00000009154	exosc1	100	88.660	Fundulus_heteroclitus
ENSPNYG00000021745	exosc1	100	95.361	ENSGMOG00000008993	exosc1	100	95.361	Gadus_morhua
ENSPNYG00000021745	exosc1	98	75.904	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSPNYG00000021745	exosc1	100	88.660	ENSGAFG00000010265	exosc1	95	88.660	Gambusia_affinis
ENSPNYG00000021745	exosc1	100	93.814	ENSGACG00000018936	exosc1	100	93.814	Gasterosteus_aculeatus
ENSPNYG00000021745	exosc1	98	76.963	ENSGAGG00000019192	EXOSC1	98	76.963	Gopherus_agassizii
ENSPNYG00000021745	exosc1	98	78.313	ENSGGOG00000003099	EXOSC1	98	78.313	Gorilla_gorilla
ENSPNYG00000021745	exosc1	100	100.000	ENSHBUG00000017857	exosc1	100	100.000	Haplochromis_burtoni
ENSPNYG00000021745	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSPNYG00000021745	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSPNYG00000021745	exosc1	100	95.876	ENSHCOG00000019882	exosc1	100	95.876	Hippocampus_comes
ENSPNYG00000021745	exosc1	100	91.753	ENSIPUG00000007685	exosc1	100	91.753	Ictalurus_punctatus
ENSPNYG00000021745	exosc1	98	79.581	ENSSTOG00000006615	EXOSC1	98	79.581	Ictidomys_tridecemlineatus
ENSPNYG00000021745	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSPNYG00000021745	exosc1	98	80.105	ENSJJAG00000013311	Exosc1	98	80.105	Jaculus_jaculus
ENSPNYG00000021745	exosc1	100	93.814	ENSKMAG00000001202	exosc1	82	93.814	Kryptolebias_marmoratus
ENSPNYG00000021745	exosc1	100	97.938	ENSLBEG00000011448	exosc1	100	97.938	Labrus_bergylta
ENSPNYG00000021745	exosc1	99	67.614	ENSLOCG00000003776	exosc1	100	67.614	Lepisosteus_oculatus
ENSPNYG00000021745	exosc1	98	80.105	ENSLAFG00000015983	EXOSC1	98	80.105	Loxodonta_africana
ENSPNYG00000021745	exosc1	98	80.105	ENSMFAG00000001493	EXOSC1	98	80.105	Macaca_fascicularis
ENSPNYG00000021745	exosc1	98	80.105	ENSMMUG00000020028	EXOSC1	98	78.313	Macaca_mulatta
ENSPNYG00000021745	exosc1	98	80.105	ENSMNEG00000029816	EXOSC1	98	80.105	Macaca_nemestrina
ENSPNYG00000021745	exosc1	98	74.346	ENSMLEG00000027643	EXOSC1	98	74.346	Mandrillus_leucophaeus
ENSPNYG00000021745	exosc1	100	97.423	ENSMAMG00000012200	exosc1	100	97.423	Mastacembelus_armatus
ENSPNYG00000021745	exosc1	100	100.000	ENSMZEG00005007042	exosc1	100	100.000	Maylandia_zebra
ENSPNYG00000021745	exosc1	98	78.313	ENSMAUG00000020462	-	98	78.313	Mesocricetus_auratus
ENSPNYG00000021745	exosc1	98	80.105	ENSMICG00000007664	EXOSC1	98	78.916	Microcebus_murinus
ENSPNYG00000021745	exosc1	97	74.603	ENSMOCG00000017124	-	96	74.603	Microtus_ochrogaster
ENSPNYG00000021745	exosc1	98	79.058	ENSMOCG00000006004	-	98	79.058	Microtus_ochrogaster
ENSPNYG00000021745	exosc1	100	72.680	ENSMMOG00000021403	exosc1	100	72.680	Mola_mola
ENSPNYG00000021745	exosc1	98	80.208	ENSMODG00000004213	EXOSC1	98	80.208	Monodelphis_domestica
ENSPNYG00000021745	exosc1	95	96.757	ENSMALG00000007061	exosc1	93	96.757	Monopterus_albus
ENSPNYG00000021745	exosc1	98	78.534	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.534	Mus_caroli
ENSPNYG00000021745	exosc1	98	78.534	ENSMUSG00000034321	Exosc1	98	78.534	Mus_musculus
ENSPNYG00000021745	exosc1	98	79.058	MGP_PahariEiJ_G0014449	Exosc1	98	79.058	Mus_pahari
ENSPNYG00000021745	exosc1	98	78.534	MGP_SPRETEiJ_G0023880	Exosc1	98	78.534	Mus_spretus
ENSPNYG00000021745	exosc1	98	80.628	ENSMPUG00000017044	EXOSC1	98	80.628	Mustela_putorius_furo
ENSPNYG00000021745	exosc1	98	80.105	ENSMLUG00000009228	EXOSC1	98	80.105	Myotis_lucifugus
ENSPNYG00000021745	exosc1	98	77.487	ENSNGAG00000022033	Exosc1	98	77.487	Nannospalax_galili
ENSPNYG00000021745	exosc1	100	79.532	ENSNBRG00000024007	exosc1	100	79.532	Neolamprologus_brichardi
ENSPNYG00000021745	exosc1	98	79.581	ENSNLEG00000013872	EXOSC1	98	79.581	Nomascus_leucogenys
ENSPNYG00000021745	exosc1	58	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSPNYG00000021745	exosc1	98	79.058	ENSOPRG00000005065	EXOSC1	98	79.058	Ochotona_princeps
ENSPNYG00000021745	exosc1	98	80.628	ENSODEG00000016709	EXOSC1	98	80.628	Octodon_degus
ENSPNYG00000021745	exosc1	100	98.969	ENSONIG00000017683	exosc1	99	98.969	Oreochromis_niloticus
ENSPNYG00000021745	exosc1	67	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSPNYG00000021745	exosc1	98	74.346	ENSOCUG00000026461	-	98	74.346	Oryctolagus_cuniculus
ENSPNYG00000021745	exosc1	98	78.646	ENSOCUG00000011898	-	98	78.646	Oryctolagus_cuniculus
ENSPNYG00000021745	exosc1	100	90.769	ENSORLG00000011595	exosc1	100	90.769	Oryzias_latipes
ENSPNYG00000021745	exosc1	100	90.769	ENSORLG00020005831	exosc1	100	90.769	Oryzias_latipes_hni
ENSPNYG00000021745	exosc1	100	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSPNYG00000021745	exosc1	100	77.320	ENSOMEG00000013907	exosc1	99	77.320	Oryzias_melastigma
ENSPNYG00000021745	exosc1	98	79.581	ENSOGAG00000016259	EXOSC1	98	79.581	Otolemur_garnettii
ENSPNYG00000021745	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSPNYG00000021745	exosc1	98	74.093	ENSPPAG00000039842	EXOSC1	98	74.093	Pan_paniscus
ENSPNYG00000021745	exosc1	98	80.628	ENSPPRG00000023366	EXOSC1	98	80.628	Panthera_pardus
ENSPNYG00000021745	exosc1	98	80.628	ENSPTIG00000017701	EXOSC1	98	80.628	Panthera_tigris_altaica
ENSPNYG00000021745	exosc1	98	80.105	ENSPTRG00000002808	EXOSC1	98	80.105	Pan_troglodytes
ENSPNYG00000021745	exosc1	98	80.105	ENSPANG00000021324	EXOSC1	98	80.105	Papio_anubis
ENSPNYG00000021745	exosc1	100	91.753	ENSPKIG00000016037	exosc1	100	91.753	Paramormyrops_kingsleyae
ENSPNYG00000021745	exosc1	91	66.316	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSPNYG00000021745	exosc1	99	96.450	ENSPMGG00000014002	exosc1	100	96.450	Periophthalmus_magnuspinnatus
ENSPNYG00000021745	exosc1	98	79.058	ENSPEMG00000010710	-	98	79.058	Peromyscus_maniculatus_bairdii
ENSPNYG00000021745	exosc1	95	71.505	ENSPMAG00000000195	exosc1	95	71.505	Petromyzon_marinus
ENSPNYG00000021745	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSPNYG00000021745	exosc1	100	88.144	ENSPFOG00000006755	exosc1	95	88.144	Poecilia_formosa
ENSPNYG00000021745	exosc1	100	88.144	ENSPLAG00000005880	exosc1	100	88.144	Poecilia_latipinna
ENSPNYG00000021745	exosc1	100	88.144	ENSPMEG00000015598	exosc1	95	88.144	Poecilia_mexicana
ENSPNYG00000021745	exosc1	100	87.647	ENSPREG00000000405	exosc1	95	87.647	Poecilia_reticulata
ENSPNYG00000021745	exosc1	98	80.105	ENSPPYG00000002531	EXOSC1	98	80.105	Pongo_abelii
ENSPNYG00000021745	exosc1	98	79.058	ENSPCAG00000009135	EXOSC1	98	79.058	Procavia_capensis
ENSPNYG00000021745	exosc1	98	73.822	ENSPCOG00000027539	EXOSC1	98	73.822	Propithecus_coquereli
ENSPNYG00000021745	exosc1	98	80.105	ENSPVAG00000003372	EXOSC1	98	80.105	Pteropus_vampyrus
ENSPNYG00000021745	exosc1	100	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSPNYG00000021745	exosc1	98	79.058	ENSRNOG00000048708	Exosc1	98	79.058	Rattus_norvegicus
ENSPNYG00000021745	exosc1	98	80.105	ENSRBIG00000035618	EXOSC1	98	80.105	Rhinopithecus_bieti
ENSPNYG00000021745	exosc1	98	80.105	ENSRROG00000032589	EXOSC1	98	78.313	Rhinopithecus_roxellana
ENSPNYG00000021745	exosc1	56	50.000	YNL232W	CSL4	54	38.125	Saccharomyces_cerevisiae
ENSPNYG00000021745	exosc1	98	80.105	ENSSBOG00000000359	EXOSC1	98	80.105	Saimiri_boliviensis_boliviensis
ENSPNYG00000021745	exosc1	75	89.041	ENSSHAG00000018219	EXOSC1	99	89.041	Sarcophilus_harrisii
ENSPNYG00000021745	exosc1	100	91.753	ENSSFOG00015009069	exosc1	100	91.753	Scleropages_formosus
ENSPNYG00000021745	exosc1	100	90.206	ENSSFOG00015016289	-	100	90.206	Scleropages_formosus
ENSPNYG00000021745	exosc1	100	97.938	ENSSMAG00000003721	exosc1	100	97.938	Scophthalmus_maximus
ENSPNYG00000021745	exosc1	100	97.423	ENSSDUG00000002993	exosc1	100	97.423	Seriola_dumerili
ENSPNYG00000021745	exosc1	100	97.423	ENSSLDG00000025181	exosc1	100	97.423	Seriola_lalandi_dorsalis
ENSPNYG00000021745	exosc1	98	68.586	ENSSARG00000000162	EXOSC1	98	68.586	Sorex_araneus
ENSPNYG00000021745	exosc1	98	74.346	ENSSPUG00000012263	EXOSC1	98	74.346	Sphenodon_punctatus
ENSPNYG00000021745	exosc1	100	89.175	ENSSPAG00000016792	exosc1	83	89.175	Stegastes_partitus
ENSPNYG00000021745	exosc1	98	79.581	ENSSSCG00000010518	EXOSC1	89	79.581	Sus_scrofa
ENSPNYG00000021745	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSPNYG00000021745	exosc1	98	84.211	ENSTRUG00000007706	exosc1	98	84.211	Takifugu_rubripes
ENSPNYG00000021745	exosc1	98	83.938	ENSTNIG00000014079	exosc1	97	83.938	Tetraodon_nigroviridis
ENSPNYG00000021745	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSPNYG00000021745	exosc1	94	81.967	ENSTTRG00000009887	EXOSC1	99	81.967	Tursiops_truncatus
ENSPNYG00000021745	exosc1	98	64.398	ENSUAMG00000010266	EXOSC1	98	64.398	Ursus_americanus
ENSPNYG00000021745	exosc1	98	64.398	ENSUMAG00000022002	EXOSC1	98	64.398	Ursus_maritimus
ENSPNYG00000021745	exosc1	98	80.105	ENSVVUG00000023192	EXOSC1	62	80.105	Vulpes_vulpes
ENSPNYG00000021745	exosc1	99	76.684	ENSXETG00000003434	exosc1	99	76.684	Xenopus_tropicalis
ENSPNYG00000021745	exosc1	71	90.083	ENSXCOG00000014499	exosc1	93	90.083	Xiphophorus_couchianus
ENSPNYG00000021745	exosc1	99	88.166	ENSXMAG00000023382	exosc1	94	88.166	Xiphophorus_maculatus