EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000021994 (Gene tree)
Gene ID: 102208406
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 5570 bases
Position: chrJH419241.1:4437088-4442657
Accession: 102208406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029192	MMR_HSR1	PF01926.23	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000029904	-	1947	XM_005730363	ENSPNYP00000029192	648 (aa)	XP_005730420	-

Gene Model

Click here to download ENSPNYG00000021994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000021994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000021994	lsg1	66	30.206	ENSPNYG00000022614	gnl1	65	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000021994	lsg1	99	64.902	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSPNYG00000021994	lsg1	100	80.458	ENSAPOG00000009694	lsg1	100	80.828	Acanthochromis_polyacanthus
ENSPNYG00000021994	lsg1	100	62.725	ENSAMEG00000009343	LSG1	100	62.537	Ailuropoda_melanoleuca
ENSPNYG00000021994	lsg1	98	89.953	ENSACIG00000012406	lsg1	100	89.846	Amphilophus_citrinellus
ENSPNYG00000021994	lsg1	100	80.335	ENSAOCG00000016066	lsg1	100	81.135	Amphiprion_ocellaris
ENSPNYG00000021994	lsg1	100	80.183	ENSAPEG00000003252	lsg1	100	80.982	Amphiprion_percula
ENSPNYG00000021994	lsg1	98	82.704	ENSATEG00000011794	lsg1	100	82.589	Anabas_testudineus
ENSPNYG00000021994	lsg1	95	60.597	ENSACAG00000004222	LSG1	100	60.436	Anolis_carolinensis
ENSPNYG00000021994	lsg1	99	64.955	ENSANAG00000021153	LSG1	99	63.718	Aotus_nancymaae
ENSPNYG00000021994	lsg1	100	99.691	ENSACLG00000000520	lsg1	100	99.691	Astatotilapia_calliptera
ENSPNYG00000021994	lsg1	100	72.741	ENSAMXG00000008271	lsg1	100	73.171	Astyanax_mexicanus
ENSPNYG00000021994	lsg1	99	63.433	ENSBTAG00000008461	LSG1	99	63.582	Bos_taurus
ENSPNYG00000021994	lsg1	76	44.898	WBGene00016907	C53H9.2	91	51.852	Caenorhabditis_elegans
ENSPNYG00000021994	lsg1	99	64.955	ENSCJAG00000013962	LSG1	99	63.868	Callithrix_jacchus
ENSPNYG00000021994	lsg1	95	64.107	ENSCAFG00000013445	LSG1	100	64.577	Canis_familiaris
ENSPNYG00000021994	lsg1	100	63.308	ENSCAFG00020002216	LSG1	100	63.690	Canis_lupus_dingo
ENSPNYG00000021994	lsg1	100	63.759	ENSCHIG00000015769	LSG1	100	64.199	Capra_hircus
ENSPNYG00000021994	lsg1	99	63.182	ENSTSYG00000001447	LSG1	99	63.063	Carlito_syrichta
ENSPNYG00000021994	lsg1	95	64.668	ENSCAPG00000009856	LSG1	99	64.992	Cavia_aperea
ENSPNYG00000021994	lsg1	99	64.750	ENSCCAG00000035744	LSG1	99	63.514	Cebus_capucinus
ENSPNYG00000021994	lsg1	99	64.048	ENSCATG00000042060	LSG1	99	61.919	Cercocebus_atys
ENSPNYG00000021994	lsg1	99	63.897	ENSCSAG00000008796	LSG1	92	63.939	Chlorocebus_sabaeus
ENSPNYG00000021994	lsg1	100	66.368	ENSCPBG00000015941	LSG1	83	65.588	Chrysemys_picta_bellii
ENSPNYG00000021994	lsg1	77	53.012	ENSCING00000007079	-	94	59.184	Ciona_intestinalis
ENSPNYG00000021994	lsg1	77	54.217	ENSCSAVG00000002514	-	97	54.217	Ciona_savignyi
ENSPNYG00000021994	lsg1	99	63.595	ENSCANG00000030709	LSG1	99	62.669	Colobus_angolensis_palliatus
ENSPNYG00000021994	lsg1	99	63.720	ENSCGRG00001019846	Lsg1	99	64.329	Cricetulus_griseus_chok1gshd
ENSPNYG00000021994	lsg1	99	63.222	ENSCGRG00000014617	Lsg1	99	63.568	Cricetulus_griseus_crigri
ENSPNYG00000021994	lsg1	98	78.793	ENSCSEG00000008522	lsg1	100	78.604	Cynoglossus_semilaevis
ENSPNYG00000021994	lsg1	98	80.569	ENSCVAG00000002484	lsg1	100	80.431	Cyprinodon_variegatus
ENSPNYG00000021994	lsg1	100	74.504	ENSDARG00000015352	lsg1	100	74.656	Danio_rerio
ENSPNYG00000021994	lsg1	99	62.891	ENSDNOG00000006224	LSG1	99	62.444	Dasypus_novemcinctus
ENSPNYG00000021994	lsg1	99	48.323	FBgn0266284	Ns3	99	48.628	Drosophila_melanogaster
ENSPNYG00000021994	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSPNYG00000021994	lsg1	88	54.651	ENSEBUG00000003119	lsg1	85	54.319	Eptatretus_burgeri
ENSPNYG00000021994	lsg1	99	62.115	ENSEASG00005000678	LSG1	99	63.623	Equus_asinus_asinus
ENSPNYG00000021994	lsg1	99	62.115	ENSECAG00000017659	LSG1	99	63.229	Equus_caballus
ENSPNYG00000021994	lsg1	87	58.120	ENSEEUG00000015217	LSG1	87	58.120	Erinaceus_europaeus
ENSPNYG00000021994	lsg1	100	70.739	ENSELUG00000023973	lsg1	100	71.342	Esox_lucius
ENSPNYG00000021994	lsg1	100	63.433	ENSFCAG00000024957	LSG1	100	63.582	Felis_catus
ENSPNYG00000021994	lsg1	99	59.492	ENSFALG00000007210	LSG1	99	59.459	Ficedula_albicollis
ENSPNYG00000021994	lsg1	99	62.387	ENSFDAG00000017373	LSG1	99	64.329	Fukomys_damarensis
ENSPNYG00000021994	lsg1	98	81.250	ENSFHEG00000003680	lsg1	100	81.431	Fundulus_heteroclitus
ENSPNYG00000021994	lsg1	98	68.955	ENSGMOG00000015834	lsg1	91	76.868	Gadus_morhua
ENSPNYG00000021994	lsg1	99	60.060	ENSGALG00000007058	LSG1	87	60.954	Gallus_gallus
ENSPNYG00000021994	lsg1	98	81.073	ENSGAFG00000015831	lsg1	100	81.231	Gambusia_affinis
ENSPNYG00000021994	lsg1	98	79.907	ENSGACG00000009323	lsg1	100	79.847	Gasterosteus_aculeatus
ENSPNYG00000021994	lsg1	99	62.832	ENSGGOG00000000520	LSG1	99	63.024	Gorilla_gorilla
ENSPNYG00000021994	lsg1	100	98.457	ENSHBUG00000005659	lsg1	100	98.457	Haplochromis_burtoni
ENSPNYG00000021994	lsg1	99	61.854	ENSHGLG00000017390	LSG1	99	62.236	Heterocephalus_glaber_female
ENSPNYG00000021994	lsg1	99	61.854	ENSHGLG00100018587	LSG1	99	62.236	Heterocephalus_glaber_male
ENSPNYG00000021994	lsg1	98	79.495	ENSHCOG00000016848	lsg1	100	79.385	Hippocampus_comes
ENSPNYG00000021994	lsg1	100	72.894	ENSIPUG00000008631	lsg1	100	73.201	Ictalurus_punctatus
ENSPNYG00000021994	lsg1	75	57.339	ENSSTOG00000010234	LSG1	92	59.684	Ictidomys_tridecemlineatus
ENSPNYG00000021994	lsg1	99	63.982	ENSJJAG00000015513	Lsg1	99	64.286	Jaculus_jaculus
ENSPNYG00000021994	lsg1	98	76.646	ENSKMAG00000009681	lsg1	100	76.959	Kryptolebias_marmoratus
ENSPNYG00000021994	lsg1	98	77.865	ENSLBEG00000024261	lsg1	100	78.769	Labrus_bergylta
ENSPNYG00000021994	lsg1	100	65.574	ENSLACG00000013399	LSG1	100	65.574	Latimeria_chalumnae
ENSPNYG00000021994	lsg1	98	71.163	ENSLOCG00000004918	lsg1	100	71.644	Lepisosteus_oculatus
ENSPNYG00000021994	lsg1	99	63.705	ENSLAFG00000012919	-	99	64.091	Loxodonta_africana
ENSPNYG00000021994	lsg1	99	63.897	ENSMFAG00000039903	LSG1	99	62.069	Macaca_fascicularis
ENSPNYG00000021994	lsg1	99	63.897	ENSMMUG00000010708	LSG1	99	62.969	Macaca_mulatta
ENSPNYG00000021994	lsg1	99	63.897	ENSMNEG00000031538	LSG1	99	62.069	Macaca_nemestrina
ENSPNYG00000021994	lsg1	99	63.939	ENSMLEG00000041184	LSG1	99	62.969	Mandrillus_leucophaeus
ENSPNYG00000021994	lsg1	100	79.511	ENSMAMG00000000470	lsg1	100	79.511	Mastacembelus_armatus
ENSPNYG00000021994	lsg1	100	98.457	ENSMZEG00005017865	lsg1	100	98.457	Maylandia_zebra
ENSPNYG00000021994	lsg1	88	61.486	ENSMGAG00000007050	LSG1	99	62.353	Meleagris_gallopavo
ENSPNYG00000021994	lsg1	91	61.111	ENSMAUG00000016976	Lsg1	93	63.167	Mesocricetus_auratus
ENSPNYG00000021994	lsg1	99	63.222	ENSMICG00000049087	LSG1	99	61.862	Microcebus_murinus
ENSPNYG00000021994	lsg1	99	62.974	ENSMOCG00000022136	Lsg1	99	63.804	Microtus_ochrogaster
ENSPNYG00000021994	lsg1	85	90.204	ENSMMOG00000008884	lsg1	100	75.655	Mola_mola
ENSPNYG00000021994	lsg1	99	55.183	ENSMODG00000019828	LSG1	99	55.183	Monodelphis_domestica
ENSPNYG00000021994	lsg1	100	63.788	MGP_CAROLIEiJ_G0020648	Lsg1	100	64.394	Mus_caroli
ENSPNYG00000021994	lsg1	100	62.407	ENSMUSG00000022538	Lsg1	100	63.939	Mus_musculus
ENSPNYG00000021994	lsg1	98	64.286	MGP_PahariEiJ_G0016352	Lsg1	100	63.885	Mus_pahari
ENSPNYG00000021994	lsg1	100	62.259	MGP_SPRETEiJ_G0021544	Lsg1	100	64.048	Mus_spretus
ENSPNYG00000021994	lsg1	100	63.308	ENSMPUG00000003734	LSG1	100	63.404	Mustela_putorius_furo
ENSPNYG00000021994	lsg1	100	62.946	ENSMLUG00000012548	LSG1	100	63.487	Myotis_lucifugus
ENSPNYG00000021994	lsg1	99	63.790	ENSNGAG00000021872	Lsg1	99	63.846	Nannospalax_galili
ENSPNYG00000021994	lsg1	99	63.526	ENSNLEG00000008293	LSG1	99	64.145	Nomascus_leucogenys
ENSPNYG00000021994	lsg1	67	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSPNYG00000021994	lsg1	100	95.872	ENSONIG00000002635	lsg1	100	95.872	Oreochromis_niloticus
ENSPNYG00000021994	lsg1	95	65.777	ENSOANG00000012742	LSG1	99	64.960	Ornithorhynchus_anatinus
ENSPNYG00000021994	lsg1	99	63.636	ENSOCUG00000004817	LSG1	99	63.636	Oryctolagus_cuniculus
ENSPNYG00000021994	lsg1	98	77.987	ENSORLG00000007695	lsg1	100	78.428	Oryzias_latipes
ENSPNYG00000021994	lsg1	98	78.774	ENSORLG00020016286	lsg1	100	78.737	Oryzias_latipes_hni
ENSPNYG00000021994	lsg1	98	77.008	ENSORLG00015012025	lsg1	100	77.469	Oryzias_latipes_hsok
ENSPNYG00000021994	lsg1	98	77.708	ENSOMEG00000022379	lsg1	100	77.948	Oryzias_melastigma
ENSPNYG00000021994	lsg1	99	63.444	ENSOGAG00000003475	LSG1	99	63.189	Otolemur_garnettii
ENSPNYG00000021994	lsg1	100	63.650	ENSOARG00000020403	LSG1	100	62.908	Ovis_aries
ENSPNYG00000021994	lsg1	99	64.168	ENSPPAG00000029271	LSG1	99	63.079	Pan_paniscus
ENSPNYG00000021994	lsg1	100	62.629	ENSPPRG00000010281	LSG1	100	62.777	Panthera_pardus
ENSPNYG00000021994	lsg1	100	63.433	ENSPTIG00000010789	LSG1	100	63.582	Panthera_tigris_altaica
ENSPNYG00000021994	lsg1	99	64.018	ENSPTRG00000015760	LSG1	99	63.418	Pan_troglodytes
ENSPNYG00000021994	lsg1	99	63.746	ENSPANG00000018249	LSG1	99	61.919	Papio_anubis
ENSPNYG00000021994	lsg1	99	71.210	ENSPKIG00000002895	lsg1	99	72.366	Paramormyrops_kingsleyae
ENSPNYG00000021994	lsg1	96	59.455	ENSPSIG00000009821	LSG1	99	58.396	Pelodiscus_sinensis
ENSPNYG00000021994	lsg1	95	75.563	ENSPMGG00000000931	lsg1	100	75.563	Periophthalmus_magnuspinnatus
ENSPNYG00000021994	lsg1	99	63.262	ENSPEMG00000012082	-	99	62.369	Peromyscus_maniculatus_bairdii
ENSPNYG00000021994	lsg1	99	59.496	ENSPMAG00000007451	lsg1	99	59.940	Petromyzon_marinus
ENSPNYG00000021994	lsg1	98	66.129	ENSPCIG00000013890	LSG1	81	66.129	Phascolarctos_cinereus
ENSPNYG00000021994	lsg1	98	81.575	ENSPFOG00000021882	lsg1	100	81.720	Poecilia_formosa
ENSPNYG00000021994	lsg1	98	81.073	ENSPLAG00000019536	lsg1	100	80.923	Poecilia_latipinna
ENSPNYG00000021994	lsg1	98	80.534	ENSPMEG00000017281	lsg1	100	80.858	Poecilia_mexicana
ENSPNYG00000021994	lsg1	98	70.186	ENSPREG00000006048	lsg1	100	69.848	Poecilia_reticulata
ENSPNYG00000021994	lsg1	92	62.825	ENSPPYG00000014425	LSG1	100	62.175	Pongo_abelii
ENSPNYG00000021994	lsg1	90	72.000	ENSPCAG00000005511	LSG1	90	72.000	Procavia_capensis
ENSPNYG00000021994	lsg1	99	63.182	ENSPCOG00000012360	LSG1	99	63.008	Propithecus_coquereli
ENSPNYG00000021994	lsg1	100	74.390	ENSPNAG00000015533	lsg1	100	74.238	Pygocentrus_nattereri
ENSPNYG00000021994	lsg1	100	62.239	ENSRNOG00000001727	Lsg1	100	64.188	Rattus_norvegicus
ENSPNYG00000021994	lsg1	99	62.334	ENSRBIG00000029053	LSG1	99	63.182	Rhinopithecus_bieti
ENSPNYG00000021994	lsg1	99	62.334	ENSRROG00000037702	LSG1	99	63.182	Rhinopithecus_roxellana
ENSPNYG00000021994	lsg1	76	44.770	YGL099W	LSG1	69	54.438	Saccharomyces_cerevisiae
ENSPNYG00000021994	lsg1	99	64.955	ENSSBOG00000034938	LSG1	99	64.350	Saimiri_boliviensis_boliviensis
ENSPNYG00000021994	lsg1	78	60.338	ENSSHAG00000003487	LSG1	100	60.902	Sarcophilus_harrisii
ENSPNYG00000021994	lsg1	98	72.214	ENSSFOG00015008955	lsg1	100	72.657	Scleropages_formosus
ENSPNYG00000021994	lsg1	98	85.423	ENSSDUG00000004622	lsg1	100	85.407	Seriola_dumerili
ENSPNYG00000021994	lsg1	98	83.072	ENSSLDG00000010869	lsg1	100	83.103	Seriola_lalandi_dorsalis
ENSPNYG00000021994	lsg1	81	65.976	ENSSARG00000012981	LSG1	84	62.259	Sorex_araneus
ENSPNYG00000021994	lsg1	100	66.063	ENSSPUG00000016347	LSG1	100	66.063	Sphenodon_punctatus
ENSPNYG00000021994	lsg1	100	80.952	ENSSPAG00000005508	lsg1	100	81.413	Stegastes_partitus
ENSPNYG00000021994	lsg1	100	61.747	ENSSSCG00000011827	LSG1	100	62.614	Sus_scrofa
ENSPNYG00000021994	lsg1	89	61.093	ENSTGUG00000009068	LSG1	100	60.427	Taeniopygia_guttata
ENSPNYG00000021994	lsg1	98	75.705	ENSTRUG00000017380	lsg1	100	75.994	Takifugu_rubripes
ENSPNYG00000021994	lsg1	98	79.717	ENSTNIG00000015570	lsg1	100	80.061	Tetraodon_nigroviridis
ENSPNYG00000021994	lsg1	100	59.403	ENSTTRG00000000559	LSG1	100	58.657	Tursiops_truncatus
ENSPNYG00000021994	lsg1	100	62.576	ENSUAMG00000012454	LSG1	100	62.519	Ursus_americanus
ENSPNYG00000021994	lsg1	100	62.576	ENSUMAG00000000855	LSG1	100	62.519	Ursus_maritimus
ENSPNYG00000021994	lsg1	95	60.883	ENSVPAG00000012400	LSG1	100	60.568	Vicugna_pacos
ENSPNYG00000021994	lsg1	95	63.854	ENSVVUG00000008956	LSG1	99	62.425	Vulpes_vulpes
ENSPNYG00000021994	lsg1	100	66.516	ENSXETG00000003451	lsg1	100	66.872	Xenopus_tropicalis
ENSPNYG00000021994	lsg1	98	82.148	ENSXCOG00000003239	lsg1	100	82.435	Xiphophorus_couchianus
ENSPNYG00000021994	lsg1	98	80.462	ENSXMAG00000005536	lsg1	100	80.631	Xiphophorus_maculatus