EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000022340 (Gene tree)
Gene ID
102192472
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Minus strand
Length
13053 bases
Position
chrJH419520.1:77149-90201
Accession
102192472
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000029693RNA_pol_Rpb1_5PF04998.172e-10111
ENSPNYP00000029673RNA_pol_Rpb1_5PF04998.172.3e-10111
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35134
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35234
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35334
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35434
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35534
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35634
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35734
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35834
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-35934
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351034
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351134
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351234
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351334
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351434
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351534
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351634
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351734
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351834
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-351934
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352034
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352134
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352234
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352334
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352434
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352534
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352634
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352734
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352834
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-352934
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-353034
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-353134
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-353234
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-353334
ENSPNYP00000029693RNA_pol_Rpb1_RPF05001.136e-353434
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24132
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24232
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24332
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24432
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24532
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24632
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24732
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24832
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-24932
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241032
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241132
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241232
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241332
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241432
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241532
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241632
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241732
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241832
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-241932
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242032
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242132
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242232
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242332
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242432
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242532
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242632
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242732
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242832
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-242932
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-243032
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-243132
ENSPNYP00000029673RNA_pol_Rpb1_RPF05001.139.7e-243232
ENSPNYP00000029693RNA_pol_Rpb1_4PF05000.171e-3711
ENSPNYP00000029673RNA_pol_Rpb1_4PF05000.171.1e-3711
ENSPNYP00000029693RNA_pol_Rpb1_2PF00623.205.3e-7511
ENSPNYP00000029673RNA_pol_Rpb1_2PF00623.205.9e-7511
ENSPNYP00000029693RNA_pol_Rpb1_3PF04983.182.6e-5011
ENSPNYP00000029673RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSPNYP00000029693RNA_pol_Rpb1_1PF04997.129e-10911
ENSPNYP00000029673RNA_pol_Rpb1_1PF04997.129.9e-10911
ENSPNYP00000029693RNA_pol_Rpb1_7PF04990.121.7e-5511
ENSPNYP00000029673RNA_pol_Rpb1_7PF04990.121.9e-5511
ENSPNYP00000029693RNA_pol_Rpb1_6PF04992.143.4e-6711
ENSPNYP00000029673RNA_pol_Rpb1_6PF04992.143.8e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000030394-8905XM_005751524ENSPNYP000000296731966 (aa)XP_005751581UPI0003AFEA60
ENSPNYT00000030415-5592-ENSPNYP000000296931863 (aa)--
Gene Model
Click here to download ENSPNYG00000022340's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022340's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000022340polr2a6838.512ENSPNYG00000020987polr3a9138.300
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000022340polr2a8798.573ENSAPOG00000006552polr2a9098.573Acanthochromis_polyacanthus
ENSPNYG00000022340polr2a8293.928ENSAMEG00000016265-8294.290Ailuropoda_melanoleuca
ENSPNYG00000022340polr2a10096.490ENSACIG00000015982polr2a10096.999Amphilophus_citrinellus
ENSPNYG00000022340polr2a10091.330ENSAOCG00000004255polr2a10093.067Amphiprion_ocellaris
ENSPNYG00000022340polr2a10098.881ENSAPEG00000012623polr2a10098.881Amphiprion_percula
ENSPNYG00000022340polr2a10098.678ENSATEG00000019644polr2a10098.678Anabas_testudineus
ENSPNYG00000022340polr2a8294.534ENSACAG00000014561POLR2A8394.774Anolis_carolinensis
ENSPNYG00000022340polr2a8294.289ENSANAG00000020093-8394.499Aotus_nancymaae
ENSPNYG00000022340polr2a10099.949ENSACLG00000006735polr2a10099.949Astatotilapia_calliptera
ENSPNYG00000022340polr2a10097.609ENSAMXG00000020046polr2a10097.609Astyanax_mexicanus
ENSPNYG00000022340polr2a8294.289ENSBTAG00000046765POLR2A8394.499Bos_taurus
ENSPNYG00000022340polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSPNYG00000022340polr2a8694.227ENSCAFG00000016532POLR2A9994.234Canis_familiaris
ENSPNYG00000022340polr2a8293.362ENSCAFG00020007929-8393.459Canis_lupus_dingo
ENSPNYG00000022340polr2a8294.289ENSCHIG00000027173-8394.499Capra_hircus
ENSPNYG00000022340polr2a9093.734ENSTSYG00000012803-8794.499Carlito_syrichta
ENSPNYG00000022340polr2a9890.828ENSCAPG00000001882-10093.363Cavia_aperea
ENSPNYG00000022340polr2a9988.713ENSCPOG00000014812-10093.118Cavia_porcellus
ENSPNYG00000022340polr2a8294.289ENSCCAG00000020938-8394.499Cebus_capucinus
ENSPNYG00000022340polr2a8294.227ENSCATG00000013680-8394.429Cercocebus_atys
ENSPNYG00000022340polr2a8294.165ENSCLAG00000012196-8294.172Chinchilla_lanigera
ENSPNYG00000022340polr2a8488.462ENSCSAG00000011644-8389.286Chlorocebus_sabaeus
ENSPNYG00000022340polr2a9388.462ENSCPBG00000012697POLR2A9986.728Chrysemys_picta_bellii
ENSPNYG00000022340polr2a9876.671ENSCING00000007884-9977.228Ciona_intestinalis
ENSPNYG00000022340polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSPNYG00000022340polr2a8293.544ENSCANG00000010622-8393.663Colobus_angolensis_palliatus
ENSPNYG00000022340polr2a8287.953ENSCGRG00001003538Polr2a8688.381Cricetulus_griseus_chok1gshd
ENSPNYG00000022340polr2a8290.658ENSCGRG00000012105Polr2a9390.625Cricetulus_griseus_crigri
ENSPNYG00000022340polr2a9997.455ENSCSEG00000002635polr2a10097.455Cynoglossus_semilaevis
ENSPNYG00000022340polr2a10098.321ENSCVAG00000005156polr2a10098.321Cyprinodon_variegatus
ENSPNYG00000022340polr2a10097.204ENSDARG00000099966polr2a10097.204Danio_rerio
ENSPNYG00000022340polr2a8290.859ENSDNOG00000016482-8290.870Dasypus_novemcinctus
ENSPNYG00000022340polr2a8294.289ENSDORG00000008667Polr2a8394.499Dipodomys_ordii
ENSPNYG00000022340polr2a9970.095FBgn0003277RpII2159875.217Drosophila_melanogaster
ENSPNYG00000022340polr2a9490.081ENSETEG00000002540-8791.182Echinops_telfairi
ENSPNYG00000022340polr2a9081.745ENSEBUG00000013967polr2a8287.197Eptatretus_burgeri
ENSPNYG00000022340polr2a8292.241ENSEASG00005019114-8492.201Equus_asinus_asinus
ENSPNYG00000022340polr2a8294.289ENSECAG00000018485POLR2A8394.499Equus_caballus
ENSPNYG00000022340polr2a8494.363ENSEEUG00000001154-9594.259Erinaceus_europaeus
ENSPNYG00000022340polr2a8991.924ENSELUG00000014284polr2a8492.602Esox_lucius
ENSPNYG00000022340polr2a8294.351ENSFDAG00000008287-8394.568Fukomys_damarensis
ENSPNYG00000022340polr2a9997.756ENSFHEG00000001768polr2a10097.756Fundulus_heteroclitus
ENSPNYG00000022340polr2a9992.470ENSGMOG00000007725polr2a10092.494Gadus_morhua
ENSPNYG00000022340polr2a99100.000ENSGAFG00000005389polr2a10093.230Gambusia_affinis
ENSPNYG00000022340polr2a9994.196ENSGACG00000019366polr2a10093.974Gasterosteus_aculeatus
ENSPNYG00000022340polr2a8292.260ENSGGOG00000014800-9692.792Gorilla_gorilla
ENSPNYG00000022340polr2a9999.948ENSHBUG00000018937polr2a10099.948Haplochromis_burtoni
ENSPNYG00000022340polr2a8294.351ENSHGLG00000012381POLR2A8394.568Heterocephalus_glaber_female
ENSPNYG00000022340polr2a8294.351ENSHGLG00100014843POLR2A8394.568Heterocephalus_glaber_male
ENSPNYG00000022340polr2a10097.813ENSHCOG00000011874polr2a10097.813Hippocampus_comes
ENSPNYG00000022340polr2a10097.355ENSIPUG00000002613Polr2a10097.355Ictalurus_punctatus
ENSPNYG00000022340polr2a8294.289ENSSTOG00000001304-8394.499Ictidomys_tridecemlineatus
ENSPNYG00000022340polr2a8294.289ENSJJAG00000013049Polr2a8394.499Jaculus_jaculus
ENSPNYG00000022340polr2a83100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSPNYG00000022340polr2a9998.270ENSLBEG00000027652polr2a10098.270Labrus_bergylta
ENSPNYG00000022340polr2a8388.462ENSLACG00000012071POLR2A8185.272Latimeria_chalumnae
ENSPNYG00000022340polr2a9987.806ENSLOCG00000013863polr2a9796.027Lepisosteus_oculatus
ENSPNYG00000022340polr2a9991.059ENSLAFG00000008626-9894.499Loxodonta_africana
ENSPNYG00000022340polr2a5292.952ENSMFAG00000007042-9992.952Macaca_fascicularis
ENSPNYG00000022340polr2a8294.227ENSMMUG00000023620-9194.234Macaca_mulatta
ENSPNYG00000022340polr2a9686.894ENSMNEG00000040407-9393.942Macaca_nemestrina
ENSPNYG00000022340polr2a8288.462ENSMLEG00000030263-9992.952Mandrillus_leucophaeus
ENSPNYG00000022340polr2a10098.423ENSMAMG00000003351polr2a10098.423Mastacembelus_armatus
ENSPNYG00000022340polr2a10099.949ENSMZEG00005021429polr2a10099.949Maylandia_zebra
ENSPNYG00000022340polr2a5394.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSPNYG00000022340polr2a8294.227ENSMICG00000013372-9893.449Microcebus_murinus
ENSPNYG00000022340polr2a9989.777ENSMOCG00000018279Polr2a10089.988Microtus_ochrogaster
ENSPNYG00000022340polr2a9990.615ENSMMOG00000012515polr2a9297.767Mola_mola
ENSPNYG00000022340polr2a8293.979ENSMODG00000007009-8394.081Monodelphis_domestica
ENSPNYG00000022340polr2a9298.265ENSMALG00000008716polr2a9995.844Monopterus_albus
ENSPNYG00000022340polr2a8294.289MGP_CAROLIEiJ_G0016587Polr2a8394.499Mus_caroli
ENSPNYG00000022340polr2a8294.289ENSMUSG00000005198Polr2a8394.499Mus_musculus
ENSPNYG00000022340polr2a8292.213MGP_PahariEiJ_G0017718Polr2a8292.222Mus_pahari
ENSPNYG00000022340polr2a8294.289MGP_SPRETEiJ_G0017423Polr2a8394.499Mus_spretus
ENSPNYG00000022340polr2a8294.289ENSMPUG00000009648-8394.499Mustela_putorius_furo
ENSPNYG00000022340polr2a8293.800ENSMLUG00000009088-8293.808Myotis_lucifugus
ENSPNYG00000022340polr2a8294.289ENSNGAG00000002543Polr2a8394.499Nannospalax_galili
ENSPNYG00000022340polr2a10097.253ENSNBRG00000002005polr2a10097.813Neolamprologus_brichardi
ENSPNYG00000022340polr2a8292.879ENSNLEG00000009460-8292.888Nomascus_leucogenys
ENSPNYG00000022340polr2a9495.098ENSMEUG00000008611-9395.098Notamacropus_eugenii
ENSPNYG00000022340polr2a8093.999ENSOPRG00000015116-9993.999Ochotona_princeps
ENSPNYG00000022340polr2a9990.921ENSODEG00000017674-9290.885Octodon_degus
ENSPNYG00000022340polr2a10099.593ENSONIG00000009231polr2a10099.593Oreochromis_niloticus
ENSPNYG00000022340polr2a5093.676ENSOANG00000003303-9893.676Ornithorhynchus_anatinus
ENSPNYG00000022340polr2a9990.230ENSOCUG00000017929-10094.172Oryctolagus_cuniculus
ENSPNYG00000022340polr2a10098.321ENSORLG00000006431polr2a10098.321Oryzias_latipes
ENSPNYG00000022340polr2a10098.321ENSORLG00020010235polr2a10098.321Oryzias_latipes_hni
ENSPNYG00000022340polr2a10098.220ENSORLG00015007075polr2a10098.220Oryzias_latipes_hsok
ENSPNYG00000022340polr2a9297.884ENSOMEG00000010713polr2a10097.884Oryzias_melastigma
ENSPNYG00000022340polr2a8294.289ENSOGAG00000033608-8394.568Otolemur_garnettii
ENSPNYG00000022340polr2a8994.289ENSOARG00000013874-9894.499Ovis_aries
ENSPNYG00000022340polr2a8191.880ENSPPAG00000043734-8894.499Pan_paniscus
ENSPNYG00000022340polr2a8292.879ENSPTRG00000008691POLR2A8292.888Pan_troglodytes
ENSPNYG00000022340polr2a8293.544ENSPANG00000024099-8393.663Papio_anubis
ENSPNYG00000022340polr2a8295.379ENSPKIG00000005727polr2a8595.379Paramormyrops_kingsleyae
ENSPNYG00000022340polr2a9892.588ENSPSIG00000014006POLR2A10092.503Pelodiscus_sinensis
ENSPNYG00000022340polr2a10097.263ENSPMGG00000019734polr2a10097.263Periophthalmus_magnuspinnatus
ENSPNYG00000022340polr2a8294.289ENSPEMG00000012521Polr2a8394.499Peromyscus_maniculatus_bairdii
ENSPNYG00000022340polr2a8693.983ENSPCIG00000028851-8293.983Phascolarctos_cinereus
ENSPNYG00000022340polr2a9998.206ENSPFOG00000007890polr2a9998.206Poecilia_formosa
ENSPNYG00000022340polr2a9998.206ENSPLAG00000007399polr2a9998.206Poecilia_latipinna
ENSPNYG00000022340polr2a9998.206ENSPMEG00000002071polr2a9998.206Poecilia_mexicana
ENSPNYG00000022340polr2a10098.220ENSPREG00000013122polr2a10098.220Poecilia_reticulata
ENSPNYG00000022340polr2a9687.391ENSPPYG00000007924-9494.499Pongo_abelii
ENSPNYG00000022340polr2a7595.000ENSPCAG00000006951-7595.000Procavia_capensis
ENSPNYG00000022340polr2a8292.989ENSPCOG00000025260-8292.998Propithecus_coquereli
ENSPNYG00000022340polr2a8293.979ENSPVAG00000005069-8394.150Pteropus_vampyrus
ENSPNYG00000022340polr2a10097.660ENSPNAG00000011237polr2a10097.660Pygocentrus_nattereri
ENSPNYG00000022340polr2a8294.227ENSRNOG00000028834Polr2a8394.429Rattus_norvegicus
ENSPNYG00000022340polr2a8293.917ENSRBIG00000002471-9193.924Rhinopithecus_bieti
ENSPNYG00000022340polr2a9687.329ENSRROG00000029583-9494.429Rhinopithecus_roxellana
ENSPNYG00000022340polr2a8549.594YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSPNYG00000022340polr2a8294.289ENSSBOG00000000808-8394.499Saimiri_boliviensis_boliviensis
ENSPNYG00000022340polr2a9393.979ENSSHAG00000002858-9794.081Sarcophilus_harrisii
ENSPNYG00000022340polr2a9997.307ENSSFOG00015023275polr2a10097.307Scleropages_formosus
ENSPNYG00000022340polr2a10090.590ENSSMAG00000009137polr2a10088.412Scophthalmus_maximus
ENSPNYG00000022340polr2a10098.728ENSSDUG00000020466polr2a10098.728Seriola_dumerili
ENSPNYG00000022340polr2a10098.678ENSSLDG00000020613polr2a10098.678Seriola_lalandi_dorsalis
ENSPNYG00000022340polr2a9589.952ENSSARG00000005875-9990.768Sorex_araneus
ENSPNYG00000022340polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSPNYG00000022340polr2a8293.358ENSSSCG00000028278-8393.454Sus_scrofa
ENSPNYG00000022340polr2a9892.572ENSTRUG00000012320polr2a8192.572Takifugu_rubripes
ENSPNYG00000022340polr2a9296.712ENSTNIG00000010136polr2a10096.712Tetraodon_nigroviridis
ENSPNYG00000022340polr2a7794.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSPNYG00000022340polr2a8292.613ENSTTRG00000014273-8292.622Tursiops_truncatus
ENSPNYG00000022340polr2a9293.870ENSUAMG00000014866-10091.404Ursus_americanus
ENSPNYG00000022340polr2a7791.061ENSUMAG00000015732-8391.061Ursus_maritimus
ENSPNYG00000022340polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSPNYG00000022340polr2a9687.329ENSVVUG00000027878-9594.429Vulpes_vulpes
ENSPNYG00000022340polr2a8193.896ENSXETG00000012465polr2a8293.903Xenopus_tropicalis
ENSPNYG00000022340polr2a9895.946ENSXCOG00000001804polr2a10091.102Xiphophorus_couchianus
ENSPNYG00000022340polr2a10098.220ENSXMAG00000015687polr2a10098.220Xiphophorus_maculatus

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