EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022467 (Gene tree)
Gene ID: 102193823
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 20676 bases
Position: chrJH419520.1:157399-178074
Accession: 102193823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	1	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	2	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	3	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	4	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	5	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	6	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	7	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	8	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	9	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	10	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	11	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	12	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	13	14
ENSPNYP00000029858	KH_1	PF00013.29	3.2e-186	14	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	1	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	2	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	3	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	4	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	5	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	6	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	7	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	8	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	9	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	10	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	11	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	12	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	13	14
ENSPNYP00000029818	KH_1	PF00013.29	6.3e-186	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000030547	-	6031	-	ENSPNYP00000029818	1246 (aa)	-	-
ENSPNYT00000030588	-	3795	XM_005751529	ENSPNYP00000029858	1264 (aa)	XP_005751586	-

Gene Model

Click here to download ENSPNYG00000022467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022467	hdlbpb	100	71.484	ENSPNYG00000020753	hdlbpa	100	71.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022467	hdlbpb	100	97.240	ENSAPOG00000006904	hdlbpb	100	97.240	Acanthochromis_polyacanthus
ENSPNYG00000022467	hdlbpb	100	93.307	ENSACIG00000016154	hdlbpb	100	93.543	Amphilophus_citrinellus
ENSPNYG00000022467	hdlbpb	100	97.792	ENSAOCG00000004083	hdlbpb	100	97.792	Amphiprion_ocellaris
ENSPNYG00000022467	hdlbpb	100	97.713	ENSAPEG00000012270	hdlbpb	100	97.713	Amphiprion_percula
ENSPNYG00000022467	hdlbpb	100	96.215	ENSATEG00000019877	hdlbpb	100	96.215	Anabas_testudineus
ENSPNYG00000022467	hdlbpb	100	81.926	ENSACAG00000003606	-	100	81.926	Anolis_carolinensis
ENSPNYG00000022467	hdlbpb	100	99.685	ENSACLG00000006618	hdlbpb	100	99.685	Astatotilapia_calliptera
ENSPNYG00000022467	hdlbpb	100	78.127	ENSAMXG00000019946	hdlbpb	100	78.127	Astyanax_mexicanus
ENSPNYG00000022467	hdlbpb	100	95.505	ENSCSEG00000000955	hdlbpb	100	95.505	Cynoglossus_semilaevis
ENSPNYG00000022467	hdlbpb	100	95.347	ENSCVAG00000005345	hdlbpb	100	95.347	Cyprinodon_variegatus
ENSPNYG00000022467	hdlbpb	99	85.622	ENSDARG00000061864	hdlbpb	99	85.229	Danio_rerio
ENSPNYG00000022467	hdlbpb	94	70.342	ENSEBUG00000005304	hdlbpb	94	71.391	Eptatretus_burgeri
ENSPNYG00000022467	hdlbpb	100	78.600	ENSELUG00000019925	hdlbpb	100	78.600	Esox_lucius
ENSPNYG00000022467	hdlbpb	88	34.375	ENSFHEG00000001701	hdlbpb	100	90.600	Fundulus_heteroclitus
ENSPNYG00000022467	hdlbpb	97	87.362	ENSGMOG00000004522	hdlbpb	78	87.362	Gadus_morhua
ENSPNYG00000022467	hdlbpb	100	95.505	ENSGAFG00000005278	hdlbpb	100	95.505	Gambusia_affinis
ENSPNYG00000022467	hdlbpb	99	92.028	ENSGACG00000019361	hdlbpb	100	92.028	Gasterosteus_aculeatus
ENSPNYG00000022467	hdlbpb	100	99.527	ENSHBUG00000018434	hdlbpb	100	99.527	Haplochromis_burtoni
ENSPNYG00000022467	hdlbpb	100	85.343	ENSIPUG00000003291	HDLBP	100	85.876	Ictalurus_punctatus
ENSPNYG00000022467	hdlbpb	100	96.136	ENSKMAG00000016562	hdlbpb	100	96.136	Kryptolebias_marmoratus
ENSPNYG00000022467	hdlbpb	100	96.215	ENSLBEG00000027855	hdlbpb	100	96.215	Labrus_bergylta
ENSPNYG00000022467	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	90	84.960	Latimeria_chalumnae
ENSPNYG00000022467	hdlbpb	100	83.202	ENSLOCG00000013909	hdlbpb	100	83.202	Lepisosteus_oculatus
ENSPNYG00000022467	hdlbpb	100	97.003	ENSMAMG00000003035	hdlbpb	100	97.003	Mastacembelus_armatus
ENSPNYG00000022467	hdlbpb	100	99.685	ENSMZEG00005021465	hdlbpb	100	99.685	Maylandia_zebra
ENSPNYG00000022467	hdlbpb	100	95.099	ENSMMOG00000012525	hdlbpb	100	95.099	Mola_mola
ENSPNYG00000022467	hdlbpb	100	94.558	ENSMALG00000008938	hdlbpb	100	94.558	Monopterus_albus
ENSPNYG00000022467	hdlbpb	100	99.527	ENSNBRG00000002236	hdlbpb	100	99.527	Neolamprologus_brichardi
ENSPNYG00000022467	hdlbpb	100	99.211	ENSONIG00000009211	hdlbpb	100	99.211	Oreochromis_niloticus
ENSPNYG00000022467	hdlbpb	100	95.032	ENSORLG00000006581	hdlbpb	100	95.032	Oryzias_latipes
ENSPNYG00000022467	hdlbpb	100	95.032	ENSORLG00020010012	hdlbpb	100	95.032	Oryzias_latipes_hni
ENSPNYG00000022467	hdlbpb	100	95.268	ENSORLG00015006863	hdlbpb	100	95.268	Oryzias_latipes_hsok
ENSPNYG00000022467	hdlbpb	100	95.110	ENSOMEG00000011131	hdlbpb	100	95.110	Oryzias_melastigma
ENSPNYG00000022467	hdlbpb	100	88.792	ENSPKIG00000005966	hdlbpb	100	88.792	Paramormyrops_kingsleyae
ENSPNYG00000022467	hdlbpb	88	93.056	ENSPMGG00000019853	hdlbpb	99	93.056	Periophthalmus_magnuspinnatus
ENSPNYG00000022467	hdlbpb	92	64.901	ENSPMAG00000000249	-	99	64.744	Petromyzon_marinus
ENSPNYG00000022467	hdlbpb	96	74.890	ENSPMAG00000002131	hdlbpb	100	74.890	Petromyzon_marinus
ENSPNYG00000022467	hdlbpb	100	94.774	ENSPFOG00000008755	hdlbpb	100	94.774	Poecilia_formosa
ENSPNYG00000022467	hdlbpb	100	95.820	ENSPLAG00000007055	hdlbpb	100	95.820	Poecilia_latipinna
ENSPNYG00000022467	hdlbpb	100	95.741	ENSPMEG00000001952	hdlbpb	100	95.741	Poecilia_mexicana
ENSPNYG00000022467	hdlbpb	100	95.978	ENSPREG00000012848	hdlbpb	100	95.978	Poecilia_reticulata
ENSPNYG00000022467	hdlbpb	100	87.609	ENSPNAG00000011104	hdlbpb	100	87.609	Pygocentrus_nattereri
ENSPNYG00000022467	hdlbpb	100	88.161	ENSSFOG00015023199	hdlbpb	100	88.161	Scleropages_formosus
ENSPNYG00000022467	hdlbpb	100	96.609	ENSSMAG00000008790	hdlbpb	100	96.609	Scophthalmus_maximus
ENSPNYG00000022467	hdlbpb	100	97.474	ENSSDUG00000020694	hdlbpb	100	97.474	Seriola_dumerili
ENSPNYG00000022467	hdlbpb	100	97.310	ENSSLDG00000020807	hdlbpb	100	97.310	Seriola_lalandi_dorsalis
ENSPNYG00000022467	hdlbpb	100	82.557	ENSSPUG00000018688	-	100	82.557	Sphenodon_punctatus
ENSPNYG00000022467	hdlbpb	100	97.634	ENSSPAG00000016969	hdlbpb	100	97.634	Stegastes_partitus
ENSPNYG00000022467	hdlbpb	99	92.812	ENSTRUG00000012888	hdlbpb	99	92.733	Takifugu_rubripes
ENSPNYG00000022467	hdlbpb	99	93.695	ENSTNIG00000002555	hdlbpb	100	93.657	Tetraodon_nigroviridis
ENSPNYG00000022467	hdlbpb	100	83.871	ENSXCOG00000001797	hdlbpb	100	83.871	Xiphophorus_couchianus
ENSPNYG00000022467	hdlbpb	100	95.268	ENSXMAG00000015633	hdlbpb	100	95.268	Xiphophorus_maculatus