EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022511 (Gene tree)
Gene ID: 102207686
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valine--tRNA ligase-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 16036 bases
Position: chrJH419250.1:669480-685515
Accession: 102207686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029863	tRNA-synt_1g	PF09334.11	3.9e-13	1	1
ENSPNYP00000029863	Anticodon_1	PF08264.13	2.9e-36	1	1
ENSPNYP00000029863	tRNA-synt_1	PF00133.22	4.1e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000030593	-	5006	XM_005731849	ENSPNYP00000029863	1276 (aa)	XP_005731906	UPI0003AF8246

Gene Model

Click here to download ENSPNYG00000022511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022511	vars	69	56.486	ENSPNYG00000010314	vars2	99	56.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022511	vars	100	64.569	ENSG00000204394	VARS	99	71.779	Homo_sapiens
ENSPNYG00000022511	vars	94	91.445	ENSAPOG00000020921	vars	96	91.445	Acanthochromis_polyacanthus
ENSPNYG00000022511	vars	94	91.445	ENSAPOG00000020691	vars	96	91.445	Acanthochromis_polyacanthus
ENSPNYG00000022511	vars	100	64.752	ENSAMEG00000006417	VARS	100	64.811	Ailuropoda_melanoleuca
ENSPNYG00000022511	vars	100	93.427	ENSACIG00000013752	vars	100	93.427	Amphilophus_citrinellus
ENSPNYG00000022511	vars	100	91.850	ENSAOCG00000002447	vars	99	91.850	Amphiprion_ocellaris
ENSPNYG00000022511	vars	100	91.771	ENSAPEG00000010638	vars	99	91.771	Amphiprion_percula
ENSPNYG00000022511	vars	100	87.412	ENSATEG00000020219	vars	100	87.412	Anabas_testudineus
ENSPNYG00000022511	vars	90	71.948	ENSACAG00000029133	-	99	71.948	Anolis_carolinensis
ENSPNYG00000022511	vars	100	64.569	ENSANAG00000015453	VARS	100	64.806	Aotus_nancymaae
ENSPNYG00000022511	vars	100	99.843	ENSACLG00000025699	vars	97	99.843	Astatotilapia_calliptera
ENSPNYG00000022511	vars	96	80.327	ENSAMXG00000017716	vars	96	80.327	Astyanax_mexicanus
ENSPNYG00000022511	vars	100	64.957	ENSBTAG00000005631	VARS	100	65.194	Bos_taurus
ENSPNYG00000022511	vars	100	64.413	ENSCJAG00000002604	VARS	100	64.651	Callithrix_jacchus
ENSPNYG00000022511	vars	100	64.491	ENSCAFG00000000636	VARS	100	64.551	Canis_familiaris
ENSPNYG00000022511	vars	94	65.783	ENSCAFG00020020790	VARS	96	65.842	Canis_lupus_dingo
ENSPNYG00000022511	vars	100	65.035	ENSCHIG00000011008	VARS	100	65.271	Capra_hircus
ENSPNYG00000022511	vars	100	64.336	ENSTSYG00000001567	VARS	100	64.574	Carlito_syrichta
ENSPNYG00000022511	vars	91	68.045	ENSCAPG00000013736	VARS	98	67.900	Cavia_aperea
ENSPNYG00000022511	vars	100	64.651	ENSCPOG00000000870	VARS	100	64.369	Cavia_porcellus
ENSPNYG00000022511	vars	100	64.624	ENSCCAG00000035656	VARS	100	64.856	Cebus_capucinus
ENSPNYG00000022511	vars	100	64.729	ENSCATG00000022394	VARS	100	65.039	Cercocebus_atys
ENSPNYG00000022511	vars	93	63.748	ENSCLAG00000009470	VARS	97	63.532	Chinchilla_lanigera
ENSPNYG00000022511	vars	100	64.574	ENSCSAG00000008784	VARS	100	64.884	Chlorocebus_sabaeus
ENSPNYG00000022511	vars	77	74.438	ENSCPBG00000007943	VARS	96	74.438	Chrysemys_picta_bellii
ENSPNYG00000022511	vars	100	64.729	ENSCANG00000033570	VARS	100	65.039	Colobus_angolensis_palliatus
ENSPNYG00000022511	vars	100	64.025	ENSCGRG00001005686	Vars	100	64.341	Cricetulus_griseus_chok1gshd
ENSPNYG00000022511	vars	93	62.038	ENSCGRG00000013352	Vars	78	62.377	Cricetulus_griseus_crigri
ENSPNYG00000022511	vars	100	83.007	ENSCSEG00000019652	vars	100	83.007	Cynoglossus_semilaevis
ENSPNYG00000022511	vars	100	92.085	ENSCVAG00000022398	vars	100	92.085	Cyprinodon_variegatus
ENSPNYG00000022511	vars	100	84.338	ENSDARG00000044575	vars	100	84.338	Danio_rerio
ENSPNYG00000022511	vars	82	70.342	ENSDORG00000016433	Vars	94	70.427	Dipodomys_ordii
ENSPNYG00000022511	vars	68	74.088	ENSETEG00000003824	VARS	76	74.088	Echinops_telfairi
ENSPNYG00000022511	vars	57	65.253	ENSEBUG00000004637	vars	100	65.253	Eptatretus_burgeri
ENSPNYG00000022511	vars	100	65.190	ENSEASG00005015673	VARS	100	65.426	Equus_asinus_asinus
ENSPNYG00000022511	vars	100	64.984	ENSECAG00000014620	VARS	100	65.143	Equus_caballus
ENSPNYG00000022511	vars	72	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSPNYG00000022511	vars	100	84.165	ENSELUG00000006550	vars	97	84.059	Esox_lucius
ENSPNYG00000022511	vars	100	64.802	ENSFCAG00000004510	VARS	100	64.961	Felis_catus
ENSPNYG00000022511	vars	83	69.664	ENSFDAG00000011401	VARS	100	69.299	Fukomys_damarensis
ENSPNYG00000022511	vars	100	90.282	ENSFHEG00000010672	vars	100	90.282	Fundulus_heteroclitus
ENSPNYG00000022511	vars	100	81.776	ENSGMOG00000014908	vars	100	81.776	Gadus_morhua
ENSPNYG00000022511	vars	100	91.379	ENSGAFG00000021630	vars	100	91.379	Gambusia_affinis
ENSPNYG00000022511	vars	93	90.764	ENSGACG00000009601	vars	100	86.385	Gasterosteus_aculeatus
ENSPNYG00000022511	vars	50	60.125	ENSGAGG00000006508	-	91	59.813	Gopherus_agassizii
ENSPNYG00000022511	vars	100	64.806	ENSGGOG00000011364	VARS	100	65.116	Gorilla_gorilla
ENSPNYG00000022511	vars	100	99.922	ENSHBUG00000017151	vars	97	99.922	Haplochromis_burtoni
ENSPNYG00000022511	vars	100	64.386	ENSHGLG00000011646	VARS	100	64.386	Heterocephalus_glaber_female
ENSPNYG00000022511	vars	93	60.934	ENSHGLG00100018062	VARS	99	60.855	Heterocephalus_glaber_male
ENSPNYG00000022511	vars	99	85.513	ENSHCOG00000012198	vars	99	85.692	Hippocampus_comes
ENSPNYG00000022511	vars	100	83.281	ENSIPUG00000005218	vars	100	83.359	Ictalurus_punctatus
ENSPNYG00000022511	vars	100	65.035	ENSSTOG00000013112	VARS	100	64.961	Ictidomys_tridecemlineatus
ENSPNYG00000022511	vars	100	64.286	ENSJJAG00000019749	-	100	64.103	Jaculus_jaculus
ENSPNYG00000022511	vars	100	52.771	ENSJJAG00000015343	-	98	54.739	Jaculus_jaculus
ENSPNYG00000022511	vars	100	87.461	ENSKMAG00000009455	vars	100	87.461	Kryptolebias_marmoratus
ENSPNYG00000022511	vars	100	87.652	ENSLBEG00000010341	vars	99	87.652	Labrus_bergylta
ENSPNYG00000022511	vars	94	66.612	ENSLACG00000015232	VARS	99	66.830	Latimeria_chalumnae
ENSPNYG00000022511	vars	100	75.274	ENSLOCG00000004240	vars	100	75.509	Lepisosteus_oculatus
ENSPNYG00000022511	vars	100	64.697	ENSLAFG00000023090	VARS	100	64.697	Loxodonta_africana
ENSPNYG00000022511	vars	100	64.574	ENSMFAG00000001032	VARS	100	64.884	Macaca_fascicularis
ENSPNYG00000022511	vars	100	64.574	ENSMMUG00000006828	VARS	100	64.884	Macaca_mulatta
ENSPNYG00000022511	vars	100	64.574	ENSMNEG00000042072	VARS	100	64.884	Macaca_nemestrina
ENSPNYG00000022511	vars	100	64.651	ENSMLEG00000039307	VARS	100	64.961	Mandrillus_leucophaeus
ENSPNYG00000022511	vars	100	90.831	ENSMAMG00000003949	vars	100	90.831	Mastacembelus_armatus
ENSPNYG00000022511	vars	100	99.843	ENSMZEG00005018327	vars	97	99.843	Maylandia_zebra
ENSPNYG00000022511	vars	100	63.869	ENSMAUG00000006715	Vars	100	64.186	Mesocricetus_auratus
ENSPNYG00000022511	vars	100	64.779	ENSMICG00000003548	VARS	100	64.574	Microcebus_murinus
ENSPNYG00000022511	vars	100	63.219	ENSMOCG00000015404	Vars	100	63.333	Microtus_ochrogaster
ENSPNYG00000022511	vars	100	87.304	ENSMMOG00000015801	vars	100	87.304	Mola_mola
ENSPNYG00000022511	vars	100	65.271	ENSMODG00000015204	-	100	65.194	Monodelphis_domestica
ENSPNYG00000022511	vars	99	90.760	ENSMALG00000022532	vars	99	90.760	Monopterus_albus
ENSPNYG00000022511	vars	100	64.852	MGP_CAROLIEiJ_G0021491	Vars	100	64.961	Mus_caroli
ENSPNYG00000022511	vars	100	64.697	ENSMUSG00000007029	Vars	100	64.806	Mus_musculus
ENSPNYG00000022511	vars	100	64.619	MGP_PahariEiJ_G0020486	Vars	100	64.619	Mus_pahari
ENSPNYG00000022511	vars	100	64.774	MGP_SPRETEiJ_G0022396	Vars	100	64.884	Mus_spretus
ENSPNYG00000022511	vars	100	64.569	ENSMPUG00000010821	VARS	100	64.628	Mustela_putorius_furo
ENSPNYG00000022511	vars	78	67.825	ENSMLUG00000013126	VARS	100	67.723	Myotis_lucifugus
ENSPNYG00000022511	vars	100	64.463	ENSNGAG00000012151	Vars	100	64.546	Nannospalax_galili
ENSPNYG00000022511	vars	100	99.530	ENSNBRG00000020520	vars	100	99.530	Neolamprologus_brichardi
ENSPNYG00000022511	vars	100	64.646	ENSNLEG00000006351	VARS	100	64.884	Nomascus_leucogenys
ENSPNYG00000022511	vars	94	71.944	ENSMEUG00000011378	VARS	100	63.219	Notamacropus_eugenii
ENSPNYG00000022511	vars	100	64.880	ENSOPRG00000003607	VARS	100	65.194	Ochotona_princeps
ENSPNYG00000022511	vars	100	63.686	ENSODEG00000017681	VARS	100	63.608	Octodon_degus
ENSPNYG00000022511	vars	100	97.348	ENSONIG00000013064	vars	100	99.216	Oreochromis_niloticus
ENSPNYG00000022511	vars	77	67.292	ENSOANG00000005400	VARS	98	67.213	Ornithorhynchus_anatinus
ENSPNYG00000022511	vars	100	63.219	ENSOCUG00000022463	VARS	100	62.954	Oryctolagus_cuniculus
ENSPNYG00000022511	vars	100	89.494	ENSORLG00000013063	vars	100	89.650	Oryzias_latipes
ENSPNYG00000022511	vars	100	90.149	ENSORLG00020003504	vars	100	90.227	Oryzias_latipes_hni
ENSPNYG00000022511	vars	100	90.376	ENSORLG00015009001	vars	100	90.376	Oryzias_latipes_hsok
ENSPNYG00000022511	vars	100	90.610	ENSOMEG00000015016	vars	100	90.610	Oryzias_melastigma
ENSPNYG00000022511	vars	100	64.413	ENSOGAG00000007515	VARS	100	64.203	Otolemur_garnettii
ENSPNYG00000022511	vars	100	64.569	ENSPPAG00000034012	VARS	100	64.806	Pan_paniscus
ENSPNYG00000022511	vars	100	64.802	ENSPPRG00000014855	VARS	100	64.961	Panthera_pardus
ENSPNYG00000022511	vars	85	68.928	ENSPTIG00000010462	VARS	94	68.592	Panthera_tigris_altaica
ENSPNYG00000022511	vars	100	64.491	ENSPTRG00000017985	VARS	100	64.729	Pan_troglodytes
ENSPNYG00000022511	vars	100	63.097	ENSPANG00000014565	VARS	100	63.405	Papio_anubis
ENSPNYG00000022511	vars	100	81.479	ENSPKIG00000016304	vars	100	81.479	Paramormyrops_kingsleyae
ENSPNYG00000022511	vars	100	83.699	ENSPMGG00000023909	vars	100	83.699	Periophthalmus_magnuspinnatus
ENSPNYG00000022511	vars	100	64.258	ENSPEMG00000006639	Vars	100	64.574	Peromyscus_maniculatus_bairdii
ENSPNYG00000022511	vars	100	64.806	ENSPCIG00000018553	VARS	100	64.884	Phascolarctos_cinereus
ENSPNYG00000022511	vars	100	91.144	ENSPFOG00000015690	vars	100	91.144	Poecilia_formosa
ENSPNYG00000022511	vars	100	90.987	ENSPLAG00000009590	vars	100	90.987	Poecilia_latipinna
ENSPNYG00000022511	vars	100	91.066	ENSPMEG00000004708	vars	100	91.066	Poecilia_mexicana
ENSPNYG00000022511	vars	95	93.217	ENSPREG00000013264	vars	100	86.285	Poecilia_reticulata
ENSPNYG00000022511	vars	100	63.248	ENSPPYG00000016460	VARS	100	63.080	Pongo_abelii
ENSPNYG00000022511	vars	86	65.897	ENSPCAG00000013565	VARS	86	65.897	Procavia_capensis
ENSPNYG00000022511	vars	100	64.596	ENSPCOG00000010942	VARS	100	64.756	Propithecus_coquereli
ENSPNYG00000022511	vars	100	62.607	ENSPVAG00000012403	VARS	100	62.946	Pteropus_vampyrus
ENSPNYG00000022511	vars	100	83.919	ENSPNAG00000020962	vars	100	84.153	Pygocentrus_nattereri
ENSPNYG00000022511	vars	100	64.569	ENSRNOG00000000867	Vars	100	64.396	Rattus_norvegicus
ENSPNYG00000022511	vars	100	64.651	ENSRBIG00000041669	VARS	100	64.961	Rhinopithecus_bieti
ENSPNYG00000022511	vars	100	64.651	ENSRROG00000045490	VARS	100	64.961	Rhinopithecus_roxellana
ENSPNYG00000022511	vars	100	64.258	ENSSBOG00000035402	VARS	100	64.496	Saimiri_boliviensis_boliviensis
ENSPNYG00000022511	vars	100	64.357	ENSSHAG00000006937	VARS	100	64.467	Sarcophilus_harrisii
ENSPNYG00000022511	vars	100	80.904	ENSSFOG00015014272	vars	100	80.904	Scleropages_formosus
ENSPNYG00000022511	vars	100	89.593	ENSSMAG00000009596	vars	99	89.593	Scophthalmus_maximus
ENSPNYG00000022511	vars	100	92.879	ENSSDUG00000014177	vars	100	92.879	Seriola_dumerili
ENSPNYG00000022511	vars	100	92.645	ENSSLDG00000025316	vars	100	92.645	Seriola_lalandi_dorsalis
ENSPNYG00000022511	vars	100	91.379	ENSSPAG00000017068	vars	100	91.614	Stegastes_partitus
ENSPNYG00000022511	vars	100	64.286	ENSSSCG00000038950	VARS	100	64.446	Sus_scrofa
ENSPNYG00000022511	vars	82	81.506	ENSTRUG00000012307	vars	98	81.387	Takifugu_rubripes
ENSPNYG00000022511	vars	100	86.933	ENSTNIG00000008011	vars	100	86.933	Tetraodon_nigroviridis
ENSPNYG00000022511	vars	100	58.929	ENSTTRG00000014128	VARS	100	58.929	Tursiops_truncatus
ENSPNYG00000022511	vars	100	63.101	ENSUAMG00000010424	VARS	100	63.166	Ursus_americanus
ENSPNYG00000022511	vars	100	59.182	ENSUMAG00000013486	VARS	98	64.253	Ursus_maritimus
ENSPNYG00000022511	vars	100	64.546	ENSVVUG00000021323	VARS	100	64.369	Vulpes_vulpes
ENSPNYG00000022511	vars	100	64.469	ENSXETG00000024076	vars	100	64.424	Xenopus_tropicalis
ENSPNYG00000022511	vars	100	88.793	ENSXCOG00000019172	vars	100	88.793	Xiphophorus_couchianus
ENSPNYG00000022511	vars	100	91.301	ENSXMAG00000010927	vars	100	91.301	Xiphophorus_maculatus