EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022514 (Gene tree)
Gene ID: -
Gene Symbol: slbp2
Alias: zgc:158856
Full Name: stem-loop binding protein 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3198 bases
Position: chrJH419471.1:446490-449687
Accession: ZDB-GENE-070112-1722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029862	SLBP_RNA_bind	PF15247.6	4.9e-31	1	1
ENSPNYP00000029870	SLBP_RNA_bind	PF15247.6	9.3e-31	1	1
ENSPNYP00000029875	SLBP_RNA_bind	PF15247.6	9.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000030600	-	687	-	ENSPNYP00000029870	228 (aa)	-	-
ENSPNYT00000030605	-	696	-	ENSPNYP00000029875	231 (aa)	-	-
ENSPNYT00000030592	-	438	-	ENSPNYP00000029862	145 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000022514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022514	slbp2	70	50.980	ENSPNYG00000005451	-	57	42.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022514	slbp2	97	75.983	ENSAPOG00000004873	slbp2	91	74.236	Acanthochromis_polyacanthus
ENSPNYG00000022514	slbp2	97	65.157	ENSACIG00000007875	slbp2	89	64.912	Amphilophus_citrinellus
ENSPNYG00000022514	slbp2	77	77.895	ENSAOCG00000016241	slbp2	91	56.908	Amphiprion_ocellaris
ENSPNYG00000022514	slbp2	84	75.362	ENSAPEG00000008972	slbp2	100	75.362	Amphiprion_percula
ENSPNYG00000022514	slbp2	81	76.382	ENSATEG00000009765	slbp2	66	76.382	Anabas_testudineus
ENSPNYG00000022514	slbp2	81	85.500	ENSACLG00000000965	slbp2	58	85.500	Astatotilapia_calliptera
ENSPNYG00000022514	slbp2	81	85.500	ENSACLG00000001252	slbp2	58	85.500	Astatotilapia_calliptera
ENSPNYG00000022514	slbp2	92	47.331	ENSAMXG00000029210	slbp2	87	47.331	Astyanax_mexicanus
ENSPNYG00000022514	slbp2	90	50.355	ENSBTAG00000048053	SLBP2	96	50.355	Bos_taurus
ENSPNYG00000022514	slbp2	67	56.436	ENSCAFG00000032438	SLBP2	92	42.945	Canis_familiaris
ENSPNYG00000022514	slbp2	67	56.436	ENSCAFG00020010381	-	71	42.604	Canis_lupus_dingo
ENSPNYG00000022514	slbp2	92	47.619	ENSCHIG00000015489	-	99	47.619	Capra_hircus
ENSPNYG00000022514	slbp2	80	65.728	ENSCSEG00000006662	slbp2	59	65.728	Cynoglossus_semilaevis
ENSPNYG00000022514	slbp2	92	70.370	ENSCVAG00000003498	slbp2	87	70.370	Cyprinodon_variegatus
ENSPNYG00000022514	slbp2	70	70.297	ENSDARG00000069428	slbp2	56	64.481	Danio_rerio
ENSPNYG00000022514	slbp2	54	65.432	ENSEASG00005020781	-	77	43.750	Equus_asinus_asinus
ENSPNYG00000022514	slbp2	54	65.432	ENSECAG00000040006	SLBP2	77	43.750	Equus_caballus
ENSPNYG00000022514	slbp2	92	52.124	ENSELUG00000021799	slbp2	88	52.124	Esox_lucius
ENSPNYG00000022514	slbp2	68	55.882	ENSFCAG00000022610	-	70	41.916	Felis_catus
ENSPNYG00000022514	slbp2	92	56.140	ENSGMOG00000003044	slbp2	66	64.481	Gadus_morhua
ENSPNYG00000022514	slbp2	97	62.681	ENSGAFG00000009788	slbp2	97	62.681	Gambusia_affinis
ENSPNYG00000022514	slbp2	50	73.611	ENSGAGG00000024655	-	61	57.843	Gopherus_agassizii
ENSPNYG00000022514	slbp2	81	85.075	ENSHBUG00000019207	slbp2	58	85.075	Haplochromis_burtoni
ENSPNYG00000022514	slbp2	81	69.307	ENSHCOG00000002192	slbp2	58	69.307	Hippocampus_comes
ENSPNYG00000022514	slbp2	88	60.630	ENSIPUG00000024079	slbp2	82	48.047	Ictalurus_punctatus
ENSPNYG00000022514	slbp2	100	56.106	ENSKMAG00000005391	-	90	56.106	Kryptolebias_marmoratus
ENSPNYG00000022514	slbp2	100	75.258	ENSLBEG00000001991	slbp2	73	75.258	Labrus_bergylta
ENSPNYG00000022514	slbp2	100	72.165	ENSMAMG00000022433	slbp2	73	73.711	Mastacembelus_armatus
ENSPNYG00000022514	slbp2	81	85.500	ENSMZEG00005027825	slbp2	58	85.500	Maylandia_zebra
ENSPNYG00000022514	slbp2	59	90.698	ENSMMOG00000016838	slbp2	53	78.431	Mola_mola
ENSPNYG00000022514	slbp2	50	69.444	ENSMODG00000012173	-	96	68.000	Monodelphis_domestica
ENSPNYG00000022514	slbp2	100	54.747	ENSMALG00000009687	slbp2	86	54.747	Monopterus_albus
ENSPNYG00000022514	slbp2	100	91.667	ENSNBRG00000017849	slbp2	94	91.667	Neolamprologus_brichardi
ENSPNYG00000022514	slbp2	95	68.707	ENSONIG00000017877	slbp2	86	68.707	Oreochromis_niloticus
ENSPNYG00000022514	slbp2	100	54.662	ENSORLG00000025890	slbp2	74	74.093	Oryzias_latipes
ENSPNYG00000022514	slbp2	100	74.093	ENSORLG00020003230	slbp2	74	74.093	Oryzias_latipes_hni
ENSPNYG00000022514	slbp2	100	74.093	ENSORLG00015007694	slbp2	74	74.093	Oryzias_latipes_hsok
ENSPNYG00000022514	slbp2	81	73.869	ENSOMEG00000017456	slbp2	57	73.869	Oryzias_melastigma
ENSPNYG00000022514	slbp2	74	56.140	ENSOARG00000016289	-	59	56.140	Ovis_aries
ENSPNYG00000022514	slbp2	68	55.882	ENSPPRG00000024354	-	58	50.000	Panthera_pardus
ENSPNYG00000022514	slbp2	68	55.882	ENSPTIG00000005802	-	68	41.520	Panthera_tigris_altaica
ENSPNYG00000022514	slbp2	99	44.984	ENSPKIG00000008757	slbp2	97	45.333	Paramormyrops_kingsleyae
ENSPNYG00000022514	slbp2	78	65.761	ENSPMGG00000008118	slbp2	92	65.761	Periophthalmus_magnuspinnatus
ENSPNYG00000022514	slbp2	65	55.000	ENSPCIG00000015949	-	58	55.000	Phascolarctos_cinereus
ENSPNYG00000022514	slbp2	100	54.221	ENSPFOG00000021993	slbp2	100	54.221	Poecilia_formosa
ENSPNYG00000022514	slbp2	100	54.221	ENSPLAG00000019220	slbp2	90	54.221	Poecilia_latipinna
ENSPNYG00000022514	slbp2	100	54.221	ENSPLAG00000006548	-	91	54.221	Poecilia_latipinna
ENSPNYG00000022514	slbp2	100	51.623	ENSPMEG00000024341	slbp2	90	51.623	Poecilia_mexicana
ENSPNYG00000022514	slbp2	96	39.033	ENSPREG00000001384	-	88	34.926	Poecilia_reticulata
ENSPNYG00000022514	slbp2	71	68.932	ENSPNAG00000013685	slbp2	83	49.254	Pygocentrus_nattereri
ENSPNYG00000022514	slbp2	53	79.221	ENSSFOG00015022968	-	88	52.414	Scleropages_formosus
ENSPNYG00000022514	slbp2	94	72.872	ENSSMAG00000011121	slbp2	73	72.872	Scophthalmus_maximus
ENSPNYG00000022514	slbp2	100	58.983	ENSSDUG00000023370	slbp2	89	58.983	Seriola_dumerili
ENSPNYG00000022514	slbp2	97	76.754	ENSSLDG00000008723	slbp2	75	76.786	Seriola_lalandi_dorsalis
ENSPNYG00000022514	slbp2	60	62.637	ENSSPUG00000003262	-	62	62.637	Sphenodon_punctatus
ENSPNYG00000022514	slbp2	81	78.010	ENSSPAG00000011574	slbp2	70	78.534	Stegastes_partitus
ENSPNYG00000022514	slbp2	66	55.000	ENSSSCG00000023691	-	70	43.750	Sus_scrofa
ENSPNYG00000022514	slbp2	94	54.196	ENSTRUG00000021937	slbp2	83	54.196	Takifugu_rubripes
ENSPNYG00000022514	slbp2	50	95.833	ENSTNIG00000007598	-	98	92.405	Tetraodon_nigroviridis
ENSPNYG00000022514	slbp2	76	53.509	ENSUAMG00000000146	-	64	53.509	Ursus_americanus
ENSPNYG00000022514	slbp2	76	53.509	ENSUMAG00000016224	-	64	53.509	Ursus_maritimus
ENSPNYG00000022514	slbp2	50	69.444	ENSVVUG00000018009	-	68	46.897	Vulpes_vulpes
ENSPNYG00000022514	slbp2	52	72.000	ENSXETG00000033144	-	74	41.081	Xenopus_tropicalis
ENSPNYG00000022514	slbp2	100	54.221	ENSXMAG00000007005	slbp2	90	54.870	Xiphophorus_maculatus