EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022516 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain-helicase-DNA-binding protein 6-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 44925 bases
Position: chrJH419451.1:718663-763587
Accession: 102201960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029915	ResIII	PF04851.15	1.2e-06	1	1
ENSPNYP00000029915	BRK	PF07533.16	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000030653	-	1461	-	ENSPNYP00000029922	486 (aa)	-	-
ENSPNYT00000030646	-	8610	XM_013915025	ENSPNYP00000029915	2869 (aa)	XP_013770479	-

Gene Model

Click here to download ENSPNYG00000022516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022516	chd6	53	59.627	ENSPNYG00000018020	chd8	60	60.041
ENSPNYG00000022516	chd6	51	64.710	ENSPNYG00000010947	chd9	73	64.641
ENSPNYG00000022516	chd6	73	62.216	ENSPNYG00000012490	chd7	77	62.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022516	chd6	78	74.079	ENSG00000124177	CHD6	99	80.695	Homo_sapiens
ENSPNYG00000022516	chd6	97	84.583	ENSAPOG00000013736	chd6	85	84.397	Acanthochromis_polyacanthus
ENSPNYG00000022516	chd6	78	74.984	ENSAMEG00000009496	CHD6	78	75.081	Ailuropoda_melanoleuca
ENSPNYG00000022516	chd6	99	83.737	ENSATEG00000005608	chd6	85	85.214	Anabas_testudineus
ENSPNYG00000022516	chd6	75	79.117	ENSAPLG00000015592	CHD6	78	75.842	Anas_platyrhynchos
ENSPNYG00000022516	chd6	77	73.511	ENSACAG00000006842	CHD6	77	70.592	Anolis_carolinensis
ENSPNYG00000022516	chd6	78	74.236	ENSANAG00000037548	CHD6	99	81.319	Aotus_nancymaae
ENSPNYG00000022516	chd6	97	69.541	ENSAMXG00000009576	chd6	89	71.466	Astyanax_mexicanus
ENSPNYG00000022516	chd6	79	75.130	ENSBTAG00000005733	CHD6	77	75.130	Bos_taurus
ENSPNYG00000022516	chd6	78	74.170	ENSCJAG00000017920	CHD6	99	81.136	Callithrix_jacchus
ENSPNYG00000022516	chd6	78	74.789	ENSCAFG00000009236	CHD6	78	75.016	Canis_familiaris
ENSPNYG00000022516	chd6	78	75.033	ENSCAFG00020012906	CHD6	95	83.815	Canis_lupus_dingo
ENSPNYG00000022516	chd6	82	71.865	ENSCHIG00000017606	CHD6	77	74.984	Capra_hircus
ENSPNYG00000022516	chd6	67	78.182	ENSTSYG00000014635	CHD6	79	78.405	Carlito_syrichta
ENSPNYG00000022516	chd6	78	73.997	ENSCPOG00000015641	CHD6	78	74.417	Cavia_porcellus
ENSPNYG00000022516	chd6	78	73.885	ENSCCAG00000036828	CHD6	99	81.319	Cebus_capucinus
ENSPNYG00000022516	chd6	78	73.910	ENSCATG00000039248	CHD6	99	81.319	Cercocebus_atys
ENSPNYG00000022516	chd6	78	74.725	ENSCLAG00000013743	CHD6	78	74.756	Chinchilla_lanigera
ENSPNYG00000022516	chd6	78	74.014	ENSCSAG00000013997	CHD6	78	74.886	Chlorocebus_sabaeus
ENSPNYG00000022516	chd6	59	75.965	ENSCHOG00000012647	CHD6	68	73.770	Choloepus_hoffmanni
ENSPNYG00000022516	chd6	78	78.836	ENSCPBG00000019382	CHD6	80	75.880	Chrysemys_picta_bellii
ENSPNYG00000022516	chd6	78	74.317	ENSCANG00000043435	CHD6	99	81.319	Colobus_angolensis_palliatus
ENSPNYG00000022516	chd6	80	73.966	ENSCGRG00001002694	Chd6	79	74.048	Cricetulus_griseus_chok1gshd
ENSPNYG00000022516	chd6	97	75.050	ENSDARG00000017244	chd6	91	75.610	Danio_rerio
ENSPNYG00000022516	chd6	78	74.515	ENSDNOG00000004176	CHD6	79	74.774	Dasypus_novemcinctus
ENSPNYG00000022516	chd6	80	73.761	ENSEASG00005023433	CHD6	95	85.356	Equus_asinus_asinus
ENSPNYG00000022516	chd6	80	73.764	ENSECAG00000011761	CHD6	78	75.211	Equus_caballus
ENSPNYG00000022516	chd6	69	82.069	ENSELUG00000012309	chd6	94	81.715	Esox_lucius
ENSPNYG00000022516	chd6	78	74.789	ENSFCAG00000003572	CHD6	78	75.016	Felis_catus
ENSPNYG00000022516	chd6	75	79.313	ENSFALG00000012563	CHD6	77	75.728	Ficedula_albicollis
ENSPNYG00000022516	chd6	78	73.913	ENSFDAG00000013791	CHD6	78	74.658	Fukomys_damarensis
ENSPNYG00000022516	chd6	79	80.401	ENSGMOG00000011715	chd6	91	80.472	Gadus_morhua
ENSPNYG00000022516	chd6	84	81.412	ENSGACG00000000037	chd6	93	80.722	Gasterosteus_aculeatus
ENSPNYG00000022516	chd6	78	74.173	ENSGGOG00000013123	CHD6	99	81.319	Gorilla_gorilla
ENSPNYG00000022516	chd6	99	94.233	ENSHBUG00000014701	chd6	84	98.793	Haplochromis_burtoni
ENSPNYG00000022516	chd6	78	74.384	ENSHGLG00000004548	CHD6	78	74.609	Heterocephalus_glaber_female
ENSPNYG00000022516	chd6	78	74.384	ENSHGLG00100006401	CHD6	78	74.609	Heterocephalus_glaber_male
ENSPNYG00000022516	chd6	97	72.442	ENSIPUG00000003692	chd6	90	75.180	Ictalurus_punctatus
ENSPNYG00000022516	chd6	79	73.624	ENSSTOG00000013382	CHD6	78	74.919	Ictidomys_tridecemlineatus
ENSPNYG00000022516	chd6	84	70.433	ENSLACG00000010881	CHD6	83	70.526	Latimeria_chalumnae
ENSPNYG00000022516	chd6	72	82.947	ENSLOCG00000007386	chd6	84	76.790	Lepisosteus_oculatus
ENSPNYG00000022516	chd6	78	74.464	ENSLAFG00000012144	CHD6	80	74.984	Loxodonta_africana
ENSPNYG00000022516	chd6	78	74.431	ENSMFAG00000032830	CHD6	99	81.319	Macaca_fascicularis
ENSPNYG00000022516	chd6	78	73.950	ENSMMUG00000020458	CHD6	99	81.319	Macaca_mulatta
ENSPNYG00000022516	chd6	78	74.431	ENSMNEG00000040847	CHD6	99	81.319	Macaca_nemestrina
ENSPNYG00000022516	chd6	78	74.431	ENSMLEG00000031965	CHD6	99	81.319	Mandrillus_leucophaeus
ENSPNYG00000022516	chd6	92	89.613	ENSMAMG00000013111	chd6	85	87.952	Mastacembelus_armatus
ENSPNYG00000022516	chd6	75	77.165	ENSMGAG00000001121	CHD6	79	74.067	Meleagris_gallopavo
ENSPNYG00000022516	chd6	75	78.050	ENSMICG00000016641	CHD6	99	81.136	Microcebus_murinus
ENSPNYG00000022516	chd6	72	79.277	ENSMODG00000000720	-	79	79.277	Monodelphis_domestica
ENSPNYG00000022516	chd6	80	73.661	MGP_CAROLIEiJ_G0024604	Chd6	91	79.633	Mus_caroli
ENSPNYG00000022516	chd6	80	73.711	ENSMUSG00000057133	Chd6	91	79.908	Mus_musculus
ENSPNYG00000022516	chd6	80	73.270	MGP_PahariEiJ_G0026048	Chd6	91	79.633	Mus_pahari
ENSPNYG00000022516	chd6	80	73.574	MGP_SPRETEiJ_G0025526	Chd6	91	79.908	Mus_spretus
ENSPNYG00000022516	chd6	78	75.065	ENSMPUG00000017695	CHD6	77	75.065	Mustela_putorius_furo
ENSPNYG00000022516	chd6	78	74.643	ENSMLUG00000016247	CHD6	75	74.707	Myotis_lucifugus
ENSPNYG00000022516	chd6	100	96.626	ENSNBRG00000013839	chd6	100	96.626	Neolamprologus_brichardi
ENSPNYG00000022516	chd6	78	73.005	ENSNLEG00000006496	CHD6	78	73.715	Nomascus_leucogenys
ENSPNYG00000022516	chd6	78	72.852	ENSOPRG00000013376	-	78	72.899	Ochotona_princeps
ENSPNYG00000022516	chd6	83	92.986	ENSONIG00000000393	chd6	85	92.728	Oreochromis_niloticus
ENSPNYG00000022516	chd6	67	73.385	ENSOANG00000014347	CHD6	68	74.001	Ornithorhynchus_anatinus
ENSPNYG00000022516	chd6	78	73.573	ENSOCUG00000012394	CHD6	78	74.886	Oryctolagus_cuniculus
ENSPNYG00000022516	chd6	97	78.927	ENSORLG00020021891	chd6	95	94.589	Oryzias_latipes_hni
ENSPNYG00000022516	chd6	78	74.529	ENSOGAG00000002427	CHD6	75	74.837	Otolemur_garnettii
ENSPNYG00000022516	chd6	83	70.175	ENSOARG00000002597	CHD6	77	73.990	Ovis_aries
ENSPNYG00000022516	chd6	78	74.806	ENSPPRG00000014756	CHD6	78	75.081	Panthera_pardus
ENSPNYG00000022516	chd6	78	74.660	ENSPTIG00000011094	CHD6	78	74.886	Panthera_tigris_altaica
ENSPNYG00000022516	chd6	78	74.366	ENSPTRG00000013504	CHD6	99	81.319	Pan_troglodytes
ENSPNYG00000022516	chd6	78	74.366	ENSPANG00000025554	CHD6	99	81.319	Papio_anubis
ENSPNYG00000022516	chd6	89	65.328	ENSPKIG00000005578	chd6	89	65.380	Paramormyrops_kingsleyae
ENSPNYG00000022516	chd6	85	84.432	ENSPMGG00000014877	chd6	91	84.476	Periophthalmus_magnuspinnatus
ENSPNYG00000022516	chd6	79	75.526	ENSPCIG00000028037	CHD6	78	75.049	Phascolarctos_cinereus
ENSPNYG00000022516	chd6	97	80.515	ENSPLAG00000003128	chd6	87	80.896	Poecilia_latipinna
ENSPNYG00000022516	chd6	97	80.436	ENSPREG00000022653	chd6	99	94.872	Poecilia_reticulata
ENSPNYG00000022516	chd6	78	74.014	ENSPPYG00000011016	CHD6	78	74.821	Pongo_abelii
ENSPNYG00000022516	chd6	75	78.050	ENSPCOG00000001089	CHD6	99	81.319	Propithecus_coquereli
ENSPNYG00000022516	chd6	97	71.301	ENSPNAG00000012825	chd6	91	73.125	Pygocentrus_nattereri
ENSPNYG00000022516	chd6	80	73.601	ENSRNOG00000016744	Chd6	78	73.691	Rattus_norvegicus
ENSPNYG00000022516	chd6	78	74.366	ENSSBOG00000022089	CHD6	99	81.319	Saimiri_boliviensis_boliviensis
ENSPNYG00000022516	chd6	79	74.869	ENSSHAG00000017072	CHD6	78	73.958	Sarcophilus_harrisii
ENSPNYG00000022516	chd6	99	62.856	ENSSFOG00015012920	chd6	99	62.065	Scleropages_formosus
ENSPNYG00000022516	chd6	79	75.033	ENSSSCG00000007360	CHD6	76	75.081	Sus_scrofa
ENSPNYG00000022516	chd6	75	78.892	ENSTGUG00000003179	CHD6	81	75.632	Taeniopygia_guttata
ENSPNYG00000022516	chd6	83	83.450	ENSTNIG00000017487	chd6	92	82.821	Tetraodon_nigroviridis
ENSPNYG00000022516	chd6	76	76.157	ENSTTRG00000013438	CHD6	73	79.251	Tursiops_truncatus
ENSPNYG00000022516	chd6	78	73.698	ENSUAMG00000024036	CHD6	95	83.815	Ursus_americanus
ENSPNYG00000022516	chd6	78	74.935	ENSUMAG00000002017	CHD6	95	83.815	Ursus_maritimus
ENSPNYG00000022516	chd6	76	68.654	ENSVPAG00000007941	CHD6	70	74.107	Vicugna_pacos
ENSPNYG00000022516	chd6	78	74.789	ENSVVUG00000029164	CHD6	78	75.016	Vulpes_vulpes
ENSPNYG00000022516	chd6	76	70.726	ENSXETG00000021445	chd6	78	66.928	Xenopus_tropicalis