EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022601 (Gene tree)
Gene ID: 102204727
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 12904 bases
Position: chrJH419212.1:2506064-2518967
Accession: 102204727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000029967	zf-RanBP	PF00641.18	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000030699	-	3873	XM_013915912	ENSPNYP00000029967	711 (aa)	XP_013771366	UPI0006AABC1A

Gene Model

Click here to download ENSPNYG00000022601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022601	shrprbck1r	74	44.925	ENSPNYG00000012666	rbck1	97	44.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022601	shrprbck1r	100	84.937	ENSAPOG00000022737	shrprbck1r	100	84.519	Acanthochromis_polyacanthus
ENSPNYG00000022601	shrprbck1r	60	58.486	ENSAPOG00000023352	sharpin	95	57.798	Acanthochromis_polyacanthus
ENSPNYG00000022601	shrprbck1r	100	91.561	ENSACIG00000002184	shrprbck1r	100	91.561	Amphilophus_citrinellus
ENSPNYG00000022601	shrprbck1r	100	86.555	ENSAOCG00000002890	shrprbck1r	100	86.275	Amphiprion_ocellaris
ENSPNYG00000022601	shrprbck1r	60	58.391	ENSAOCG00000017464	sharpin	95	57.701	Amphiprion_ocellaris
ENSPNYG00000022601	shrprbck1r	60	58.391	ENSAPEG00000004049	sharpin	95	57.701	Amphiprion_percula
ENSPNYG00000022601	shrprbck1r	100	84.637	ENSAPEG00000023274	shrprbck1r	100	84.358	Amphiprion_percula
ENSPNYG00000022601	shrprbck1r	60	57.541	ENSATEG00000007832	sharpin	88	56.845	Anabas_testudineus
ENSPNYG00000022601	shrprbck1r	100	82.700	ENSATEG00000014561	shrprbck1r	100	82.700	Anabas_testudineus
ENSPNYG00000022601	shrprbck1r	100	99.578	ENSACLG00000022609	shrprbck1r	100	99.578	Astatotilapia_calliptera
ENSPNYG00000022601	shrprbck1r	55	57.692	ENSAMXG00000006229	sharpin	97	57.692	Astyanax_mexicanus
ENSPNYG00000022601	shrprbck1r	100	70.476	ENSAMXG00000021016	shrprbck1r	100	70.959	Astyanax_mexicanus
ENSPNYG00000022601	shrprbck1r	100	75.800	ENSCSEG00000011306	shrprbck1r	100	75.800	Cynoglossus_semilaevis
ENSPNYG00000022601	shrprbck1r	59	55.374	ENSCVAG00000006586	sharpin	95	54.673	Cyprinodon_variegatus
ENSPNYG00000022601	shrprbck1r	100	80.450	ENSCVAG00000007250	shrprbck1r	100	79.747	Cyprinodon_variegatus
ENSPNYG00000022601	shrprbck1r	100	70.678	ENSDARG00000059871	shrprbck1r	100	71.093	Danio_rerio
ENSPNYG00000022601	shrprbck1r	55	56.298	ENSDARG00000076995	sharpin	94	56.555	Danio_rerio
ENSPNYG00000022601	shrprbck1r	100	75.419	ENSELUG00000016022	shrprbck1r	100	75.419	Esox_lucius
ENSPNYG00000022601	shrprbck1r	59	55.916	ENSFHEG00000013564	sharpin	94	55.220	Fundulus_heteroclitus
ENSPNYG00000022601	shrprbck1r	51	60.542	ENSGMOG00000010123	sharpin	91	60.542	Gadus_morhua
ENSPNYG00000022601	shrprbck1r	59	44.235	ENSGAFG00000021405	sharpin	95	43.529	Gambusia_affinis
ENSPNYG00000022601	shrprbck1r	100	78.762	ENSGAFG00000009309	shrprbck1r	100	78.059	Gambusia_affinis
ENSPNYG00000022601	shrprbck1r	75	79.699	ENSGACG00000002544	shrprbck1r	100	79.699	Gasterosteus_aculeatus
ENSPNYG00000022601	shrprbck1r	100	99.578	ENSHBUG00000021933	shrprbck1r	100	99.578	Haplochromis_burtoni
ENSPNYG00000022601	shrprbck1r	62	51.794	ENSHCOG00000018847	sharpin	84	52.018	Hippocampus_comes
ENSPNYG00000022601	shrprbck1r	96	69.120	ENSIPUG00000014247	shrprbck1r	98	66.759	Ictalurus_punctatus
ENSPNYG00000022601	shrprbck1r	51	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSPNYG00000022601	shrprbck1r	100	78.502	ENSKMAG00000015215	shrprbck1r	100	78.502	Kryptolebias_marmoratus
ENSPNYG00000022601	shrprbck1r	60	56.977	ENSKMAG00000015204	sharpin	76	56.512	Kryptolebias_marmoratus
ENSPNYG00000022601	shrprbck1r	60	58.542	ENSLBEG00000016624	sharpin	96	57.859	Labrus_bergylta
ENSPNYG00000022601	shrprbck1r	100	84.810	ENSLBEG00000016876	shrprbck1r	100	84.810	Labrus_bergylta
ENSPNYG00000022601	shrprbck1r	95	53.207	ENSLACG00000010948	-	97	52.915	Latimeria_chalumnae
ENSPNYG00000022601	shrprbck1r	100	69.326	ENSLOCG00000008910	shrprbck1r	100	69.739	Lepisosteus_oculatus
ENSPNYG00000022601	shrprbck1r	60	43.702	ENSMAMG00000014645	sharpin	95	47.077	Mastacembelus_armatus
ENSPNYG00000022601	shrprbck1r	100	82.278	ENSMAMG00000022930	shrprbck1r	100	82.278	Mastacembelus_armatus
ENSPNYG00000022601	shrprbck1r	100	99.437	ENSMZEG00005021257	shrprbck1r	100	99.437	Maylandia_zebra
ENSPNYG00000022601	shrprbck1r	100	78.522	ENSMMOG00000003764	shrprbck1r	100	78.522	Mola_mola
ENSPNYG00000022601	shrprbck1r	56	48.800	ENSMMOG00000016788	sharpin	76	65.035	Mola_mola
ENSPNYG00000022601	shrprbck1r	57	44.789	ENSMALG00000020528	sharpin	96	45.455	Monopterus_albus
ENSPNYG00000022601	shrprbck1r	95	83.211	ENSMALG00000008861	shrprbck1r	95	83.211	Monopterus_albus
ENSPNYG00000022601	shrprbck1r	100	99.015	ENSNBRG00000002270	shrprbck1r	100	99.015	Neolamprologus_brichardi
ENSPNYG00000022601	shrprbck1r	55	55.366	ENSONIG00000009626	-	97	54.878	Oreochromis_niloticus
ENSPNYG00000022601	shrprbck1r	100	97.750	ENSONIG00000014401	shrprbck1r	100	97.750	Oreochromis_niloticus
ENSPNYG00000022601	shrprbck1r	100	79.466	ENSORLG00000007392	shrprbck1r	100	78.903	Oryzias_latipes
ENSPNYG00000022601	shrprbck1r	60	56.177	ENSORLG00000017281	sharpin	95	55.478	Oryzias_latipes
ENSPNYG00000022601	shrprbck1r	100	78.903	ENSORLG00020018619	shrprbck1r	100	78.340	Oryzias_latipes_hni
ENSPNYG00000022601	shrprbck1r	60	56.148	ENSORLG00020000801	sharpin	95	55.452	Oryzias_latipes_hni
ENSPNYG00000022601	shrprbck1r	60	56.381	ENSORLG00015009860	sharpin	95	55.684	Oryzias_latipes_hsok
ENSPNYG00000022601	shrprbck1r	100	78.903	ENSORLG00015018865	shrprbck1r	100	78.762	Oryzias_latipes_hsok
ENSPNYG00000022601	shrprbck1r	100	80.591	ENSOMEG00000012749	shrprbck1r	100	80.028	Oryzias_melastigma
ENSPNYG00000022601	shrprbck1r	57	48.955	ENSOMEG00000005729	sharpin	89	49.844	Oryzias_melastigma
ENSPNYG00000022601	shrprbck1r	100	73.259	ENSPKIG00000006933	shrprbck1r	100	73.259	Paramormyrops_kingsleyae
ENSPNYG00000022601	shrprbck1r	65	60.254	ENSPKIG00000018308	-	96	60.042	Paramormyrops_kingsleyae
ENSPNYG00000022601	shrprbck1r	100	76.264	ENSPMGG00000013254	shrprbck1r	100	75.983	Periophthalmus_magnuspinnatus
ENSPNYG00000022601	shrprbck1r	59	56.019	ENSPFOG00000015253	sharpin	95	55.324	Poecilia_formosa
ENSPNYG00000022601	shrprbck1r	100	79.466	ENSPFOG00000004214	shrprbck1r	100	78.762	Poecilia_formosa
ENSPNYG00000022601	shrprbck1r	100	79.325	ENSPLAG00000020523	shrprbck1r	100	78.622	Poecilia_latipinna
ENSPNYG00000022601	shrprbck1r	59	56.250	ENSPLAG00000000423	sharpin	95	55.556	Poecilia_latipinna
ENSPNYG00000022601	shrprbck1r	52	50.000	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSPNYG00000022601	shrprbck1r	100	78.059	ENSPMEG00000006877	shrprbck1r	100	77.356	Poecilia_mexicana
ENSPNYG00000022601	shrprbck1r	100	77.215	ENSPREG00000014689	shrprbck1r	100	76.512	Poecilia_reticulata
ENSPNYG00000022601	shrprbck1r	59	55.916	ENSPREG00000009702	sharpin	95	55.220	Poecilia_reticulata
ENSPNYG00000022601	shrprbck1r	55	56.667	ENSPNAG00000002911	sharpin	99	56.777	Pygocentrus_nattereri
ENSPNYG00000022601	shrprbck1r	100	69.262	ENSPNAG00000007847	shrprbck1r	100	69.452	Pygocentrus_nattereri
ENSPNYG00000022601	shrprbck1r	75	63.178	ENSSFOG00015014150	-	96	62.617	Scleropages_formosus
ENSPNYG00000022601	shrprbck1r	63	55.193	ENSSFOG00015004028	sharpin	99	55.000	Scleropages_formosus
ENSPNYG00000022601	shrprbck1r	100	80.609	ENSSMAG00000018085	shrprbck1r	100	80.609	Scophthalmus_maximus
ENSPNYG00000022601	shrprbck1r	100	86.357	ENSSDUG00000002959	shrprbck1r	100	86.357	Seriola_dumerili
ENSPNYG00000022601	shrprbck1r	60	45.455	ENSSDUG00000019039	sharpin	96	44.755	Seriola_dumerili
ENSPNYG00000022601	shrprbck1r	100	85.654	ENSSLDG00000009026	shrprbck1r	100	85.654	Seriola_lalandi_dorsalis
ENSPNYG00000022601	shrprbck1r	96	83.213	ENSSPAG00000016097	shrprbck1r	99	82.923	Stegastes_partitus
ENSPNYG00000022601	shrprbck1r	100	79.635	ENSTRUG00000006949	shrprbck1r	100	79.635	Takifugu_rubripes
ENSPNYG00000022601	shrprbck1r	60	52.914	ENSTRUG00000011046	sharpin	96	51.264	Takifugu_rubripes
ENSPNYG00000022601	shrprbck1r	55	56.716	ENSTNIG00000008521	sharpin	94	56.219	Tetraodon_nigroviridis
ENSPNYG00000022601	shrprbck1r	100	76.685	ENSXCOG00000006701	shrprbck1r	100	75.983	Xiphophorus_couchianus
ENSPNYG00000022601	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSPNYG00000022601	shrprbck1r	100	76.545	ENSXMAG00000018972	shrprbck1r	100	75.843	Xiphophorus_maculatus
ENSPNYG00000022601	shrprbck1r	59	56.351	ENSXMAG00000022076	sharpin	95	55.658	Xiphophorus_maculatus