EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000022818 (Gene tree)
Gene ID: 102207000
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 27742 bases
Position: chrJH419453.1:85066-112807
Accession: 102207000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000030280	KH_1	PF00013.29	4.4e-18	1	1
ENSPNYP00000030280	TUDOR	PF00567.24	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000031016	-	2798	XM_005749511	ENSPNYP00000030280	553 (aa)	XP_005749568	-

Gene Model

Click here to download ENSPNYG00000022818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022818	tdrkh	97	76.852	ENSAPOG00000012653	tdrkh	97	77.407	Acanthochromis_polyacanthus
ENSPNYG00000022818	tdrkh	98	87.293	ENSACIG00000010318	tdrkh	99	87.293	Amphilophus_citrinellus
ENSPNYG00000022818	tdrkh	97	77.963	ENSAOCG00000020623	tdrkh	97	78.519	Amphiprion_ocellaris
ENSPNYG00000022818	tdrkh	97	78.333	ENSAPEG00000018388	tdrkh	97	78.889	Amphiprion_percula
ENSPNYG00000022818	tdrkh	97	75.000	ENSATEG00000023809	tdrkh	97	75.000	Anabas_testudineus
ENSPNYG00000022818	tdrkh	97	99.065	ENSACLG00000003017	tdrkh	97	99.065	Astatotilapia_calliptera
ENSPNYG00000022818	tdrkh	97	59.669	ENSAMXG00000011664	tdrkh	91	59.594	Astyanax_mexicanus
ENSPNYG00000022818	tdrkh	97	66.484	ENSCSEG00000002894	tdrkh	96	66.298	Cynoglossus_semilaevis
ENSPNYG00000022818	tdrkh	59	80.423	ENSCVAG00000020347	tdrkh	74	80.645	Cyprinodon_variegatus
ENSPNYG00000022818	tdrkh	97	59.108	ENSDARG00000053474	tdrkh	100	53.023	Danio_rerio
ENSPNYG00000022818	tdrkh	97	63.686	ENSELUG00000024537	tdrkh	91	63.620	Esox_lucius
ENSPNYG00000022818	tdrkh	97	72.523	ENSFHEG00000003544	tdrkh	97	72.523	Fundulus_heteroclitus
ENSPNYG00000022818	tdrkh	97	61.039	ENSGMOG00000009304	tdrkh	91	61.039	Gadus_morhua
ENSPNYG00000022818	tdrkh	97	68.972	ENSGAFG00000010754	tdrkh	97	68.972	Gambusia_affinis
ENSPNYG00000022818	tdrkh	97	69.074	ENSGACG00000015258	tdrkh	91	68.889	Gasterosteus_aculeatus
ENSPNYG00000022818	tdrkh	97	99.252	ENSHBUG00000017609	tdrkh	97	99.252	Haplochromis_burtoni
ENSPNYG00000022818	tdrkh	97	59.740	ENSIPUG00000009673	tdrkh	97	59.665	Ictalurus_punctatus
ENSPNYG00000022818	tdrkh	97	72.897	ENSKMAG00000016638	tdrkh	90	73.084	Kryptolebias_marmoratus
ENSPNYG00000022818	tdrkh	97	74.302	ENSLBEG00000027323	tdrkh	96	74.164	Labrus_bergylta
ENSPNYG00000022818	tdrkh	95	49.168	ENSLOCG00000011381	tdrkh	97	50.000	Lepisosteus_oculatus
ENSPNYG00000022818	tdrkh	97	74.067	ENSMAMG00000020343	tdrkh	97	74.067	Mastacembelus_armatus
ENSPNYG00000022818	tdrkh	97	99.065	ENSMZEG00005006755	tdrkh	97	99.065	Maylandia_zebra
ENSPNYG00000022818	tdrkh	99	69.565	ENSMMOG00000020663	tdrkh	92	69.565	Mola_mola
ENSPNYG00000022818	tdrkh	97	72.119	ENSMALG00000015401	tdrkh	97	72.119	Monopterus_albus
ENSPNYG00000022818	tdrkh	93	97.485	ENSNBRG00000023815	tdrkh	95	97.485	Neolamprologus_brichardi
ENSPNYG00000022818	tdrkh	99	68.248	ENSORLG00000029204	tdrkh	98	68.248	Oryzias_latipes
ENSPNYG00000022818	tdrkh	96	67.857	ENSORLG00020016168	tdrkh	99	67.857	Oryzias_latipes_hni
ENSPNYG00000022818	tdrkh	97	68.343	ENSORLG00015014094	tdrkh	97	68.343	Oryzias_latipes_hsok
ENSPNYG00000022818	tdrkh	99	68.852	ENSOMEG00000015063	tdrkh	91	68.852	Oryzias_melastigma
ENSPNYG00000022818	tdrkh	97	58.456	ENSPKIG00000017597	tdrkh	97	58.379	Paramormyrops_kingsleyae
ENSPNYG00000022818	tdrkh	94	67.490	ENSPMGG00000019362	tdrkh	94	67.490	Periophthalmus_magnuspinnatus
ENSPNYG00000022818	tdrkh	97	68.598	ENSPFOG00000013032	tdrkh	91	68.598	Poecilia_formosa
ENSPNYG00000022818	tdrkh	97	68.785	ENSPLAG00000004193	tdrkh	97	68.785	Poecilia_latipinna
ENSPNYG00000022818	tdrkh	97	68.598	ENSPMEG00000016502	tdrkh	97	68.598	Poecilia_mexicana
ENSPNYG00000022818	tdrkh	97	68.587	ENSPREG00000004213	tdrkh	93	65.809	Poecilia_reticulata
ENSPNYG00000022818	tdrkh	97	59.665	ENSPNAG00000008783	tdrkh	91	59.590	Pygocentrus_nattereri
ENSPNYG00000022818	tdrkh	97	55.083	ENSSFOG00015001048	tdrkh	97	54.545	Scleropages_formosus
ENSPNYG00000022818	tdrkh	98	73.028	ENSSMAG00000001532	tdrkh	97	73.333	Scophthalmus_maximus
ENSPNYG00000022818	tdrkh	97	73.626	ENSSDUG00000013393	tdrkh	98	72.727	Seriola_dumerili
ENSPNYG00000022818	tdrkh	97	74.359	ENSSLDG00000017418	tdrkh	97	74.359	Seriola_lalandi_dorsalis
ENSPNYG00000022818	tdrkh	97	78.148	ENSSPAG00000006435	tdrkh	92	78.704	Stegastes_partitus
ENSPNYG00000022818	tdrkh	97	68.411	ENSTRUG00000006644	tdrkh	97	68.411	Takifugu_rubripes
ENSPNYG00000022818	tdrkh	97	66.171	ENSTNIG00000003157	tdrkh	97	66.171	Tetraodon_nigroviridis
ENSPNYG00000022818	tdrkh	82	79.310	ENSXCOG00000016972	tdrkh	99	79.310	Xiphophorus_couchianus
ENSPNYG00000022818	tdrkh	94	67.885	ENSXMAG00000014756	tdrkh	95	67.885	Xiphophorus_maculatus