EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000022856 (Gene tree)
Gene ID: 102208920
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC102208920
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3523 bases
Position: chrJH419312.1:709672-713194
Accession: 102208920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000030321	zf-CCCH	PF00642.24	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000031060	-	3431	XM_005741100	ENSPNYP00000030321	240 (aa)	XP_005741157	UPI0003AFEEAF

Gene Model

Click here to download ENSPNYG00000022856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022856	si:ch211-113e8.11	100	68.199	ENSAPOG00000010990	si:ch211-113e8.11	100	67.692	Acanthochromis_polyacanthus
ENSPNYG00000022856	si:ch211-113e8.11	81	72.081	ENSACIG00000011566	si:ch211-113e8.11	94	77.157	Amphilophus_citrinellus
ENSPNYG00000022856	si:ch211-113e8.11	100	67.054	ENSAOCG00000022156	si:ch211-113e8.11	100	65.891	Amphiprion_ocellaris
ENSPNYG00000022856	si:ch211-113e8.11	100	67.442	ENSAPEG00000018284	si:ch211-113e8.11	100	65.891	Amphiprion_percula
ENSPNYG00000022856	si:ch211-113e8.11	100	66.270	ENSATEG00000018391	si:ch211-113e8.11	100	65.476	Anabas_testudineus
ENSPNYG00000022856	si:ch211-113e8.11	100	98.750	ENSACLG00000017011	si:ch211-113e8.11	100	98.750	Astatotilapia_calliptera
ENSPNYG00000022856	si:ch211-113e8.11	97	46.442	ENSAMXG00000000733	si:ch211-113e8.11	97	50.763	Astyanax_mexicanus
ENSPNYG00000022856	si:ch211-113e8.11	99	61.719	ENSCSEG00000004538	si:ch211-113e8.11	99	59.144	Cynoglossus_semilaevis
ENSPNYG00000022856	si:ch211-113e8.11	100	60.000	ENSCVAG00000020156	si:ch211-113e8.11	99	60.159	Cyprinodon_variegatus
ENSPNYG00000022856	si:ch211-113e8.11	95	48.276	ENSDARG00000076585	si:ch211-113e8.11	97	50.000	Danio_rerio
ENSPNYG00000022856	si:ch211-113e8.11	53	36.434	FBgn0259728	CG42382	76	30.818	Drosophila_melanogaster
ENSPNYG00000022856	si:ch211-113e8.11	100	54.198	ENSELUG00000001130	si:ch211-113e8.11	100	52.091	Esox_lucius
ENSPNYG00000022856	si:ch211-113e8.11	100	59.583	ENSFHEG00000007870	si:ch211-113e8.11	99	58.333	Fundulus_heteroclitus
ENSPNYG00000022856	si:ch211-113e8.11	100	64.113	ENSGAFG00000020570	si:ch211-113e8.11	100	64.516	Gambusia_affinis
ENSPNYG00000022856	si:ch211-113e8.11	100	97.500	ENSHBUG00000003552	si:ch211-113e8.11	100	97.500	Haplochromis_burtoni
ENSPNYG00000022856	si:ch211-113e8.11	99	56.432	ENSHCOG00000002041	si:ch211-113e8.11	99	55.417	Hippocampus_comes
ENSPNYG00000022856	si:ch211-113e8.11	95	50.000	ENSIPUG00000002260	si:ch211-113e8.11	93	50.413	Ictalurus_punctatus
ENSPNYG00000022856	si:ch211-113e8.11	100	63.200	ENSKMAG00000000086	si:ch211-113e8.11	99	63.200	Kryptolebias_marmoratus
ENSPNYG00000022856	si:ch211-113e8.11	100	55.224	ENSLBEG00000008353	si:ch211-113e8.11	100	53.933	Labrus_bergylta
ENSPNYG00000022856	si:ch211-113e8.11	73	41.808	ENSLACG00000004304	si:ch211-113e8.11	77	42.581	Latimeria_chalumnae
ENSPNYG00000022856	si:ch211-113e8.11	86	63.717	ENSMAMG00000019098	si:ch211-113e8.11	90	60.889	Mastacembelus_armatus
ENSPNYG00000022856	si:ch211-113e8.11	100	95.417	ENSMZEG00005023658	si:ch211-113e8.11	100	95.417	Maylandia_zebra
ENSPNYG00000022856	si:ch211-113e8.11	100	55.738	ENSMMOG00000007254	si:ch211-113e8.11	100	54.772	Mola_mola
ENSPNYG00000022856	si:ch211-113e8.11	100	62.835	ENSMALG00000005110	si:ch211-113e8.11	100	60.000	Monopterus_albus
ENSPNYG00000022856	si:ch211-113e8.11	100	98.750	ENSNBRG00000015060	si:ch211-113e8.11	100	98.750	Neolamprologus_brichardi
ENSPNYG00000022856	si:ch211-113e8.11	100	59.839	ENSORLG00000023699	si:ch211-113e8.11	100	58.635	Oryzias_latipes
ENSPNYG00000022856	si:ch211-113e8.11	100	59.600	ENSORLG00020022094	si:ch211-113e8.11	100	57.200	Oryzias_latipes_hni
ENSPNYG00000022856	si:ch211-113e8.11	100	58.893	ENSORLG00015002588	si:ch211-113e8.11	100	57.708	Oryzias_latipes_hsok
ENSPNYG00000022856	si:ch211-113e8.11	100	60.400	ENSOMEG00000010624	si:ch211-113e8.11	100	60.000	Oryzias_melastigma
ENSPNYG00000022856	si:ch211-113e8.11	56	52.817	ENSPKIG00000023576	si:ch211-113e8.11	95	45.000	Paramormyrops_kingsleyae
ENSPNYG00000022856	si:ch211-113e8.11	96	54.783	ENSPMGG00000018547	si:ch211-113e8.11	97	55.217	Periophthalmus_magnuspinnatus
ENSPNYG00000022856	si:ch211-113e8.11	98	66.116	ENSPFOG00000007950	si:ch211-113e8.11	100	65.702	Poecilia_formosa
ENSPNYG00000022856	si:ch211-113e8.11	100	66.935	ENSPLAG00000002081	si:ch211-113e8.11	100	66.532	Poecilia_latipinna
ENSPNYG00000022856	si:ch211-113e8.11	100	66.532	ENSPMEG00000017505	si:ch211-113e8.11	100	66.129	Poecilia_mexicana
ENSPNYG00000022856	si:ch211-113e8.11	100	68.313	ENSPREG00000008530	si:ch211-113e8.11	100	68.313	Poecilia_reticulata
ENSPNYG00000022856	si:ch211-113e8.11	98	43.200	ENSPNAG00000013782	si:ch211-113e8.11	99	44.177	Pygocentrus_nattereri
ENSPNYG00000022856	si:ch211-113e8.11	97	49.167	ENSSFOG00015000959	si:ch211-113e8.11	97	47.347	Scleropages_formosus
ENSPNYG00000022856	si:ch211-113e8.11	100	67.068	ENSSMAG00000009732	si:ch211-113e8.11	100	65.462	Scophthalmus_maximus
ENSPNYG00000022856	si:ch211-113e8.11	100	69.020	ENSSDUG00000000112	si:ch211-113e8.11	100	68.235	Seriola_dumerili
ENSPNYG00000022856	si:ch211-113e8.11	100	69.804	ENSSLDG00000003287	si:ch211-113e8.11	100	69.412	Seriola_lalandi_dorsalis
ENSPNYG00000022856	si:ch211-113e8.11	100	68.482	ENSSPAG00000001375	si:ch211-113e8.11	100	68.093	Stegastes_partitus
ENSPNYG00000022856	si:ch211-113e8.11	99	56.504	ENSTRUG00000023898	si:ch211-113e8.11	99	54.878	Takifugu_rubripes
ENSPNYG00000022856	si:ch211-113e8.11	100	64.113	ENSXMAG00000024104	si:ch211-113e8.11	100	64.113	Xiphophorus_maculatus