EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000022868 (Gene tree)
Gene ID: 102209861
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 35461 bases
Position: chrJH419312.1:726042-761502
Accession: 102209861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000030340	RRM_1	PF00076.22	2.1e-40	1	3
ENSPNYP00000030340	RRM_1	PF00076.22	2.1e-40	2	3
ENSPNYP00000030340	RRM_1	PF00076.22	2.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000031079	-	4710	XM_005741103	ENSPNYP00000030340	611 (aa)	XP_005741160	UPI0003AF48E5

Gene Model

Click here to download ENSPNYG00000022868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000022868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000022868	rbm47	75	50.187	ENSPNYG00000017944	a1cf	87	52.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000022868	rbm47	95	84.831	ENSG00000163694	RBM47	100	82.687	Homo_sapiens
ENSPNYG00000022868	rbm47	100	91.883	ENSAPOG00000011062	rbm47	100	94.344	Acanthochromis_polyacanthus
ENSPNYG00000022868	rbm47	95	77.281	ENSAMEG00000009672	RBM47	100	76.183	Ailuropoda_melanoleuca
ENSPNYG00000022868	rbm47	100	93.781	ENSACIG00000011531	rbm47	100	93.781	Amphilophus_citrinellus
ENSPNYG00000022868	rbm47	100	93.496	ENSAOCG00000022245	rbm47	100	94.087	Amphiprion_ocellaris
ENSPNYG00000022868	rbm47	100	93.008	ENSAPEG00000018304	rbm47	100	94.087	Amphiprion_percula
ENSPNYG00000022868	rbm47	100	93.312	ENSATEG00000018400	rbm47	100	93.312	Anabas_testudineus
ENSPNYG00000022868	rbm47	100	76.052	ENSAPLG00000013974	RBM47	100	75.285	Anas_platyrhynchos
ENSPNYG00000022868	rbm47	100	75.570	ENSACAG00000011833	RBM47	100	75.407	Anolis_carolinensis
ENSPNYG00000022868	rbm47	100	80.977	ENSANAG00000029440	RBM47	100	82.429	Aotus_nancymaae
ENSPNYG00000022868	rbm47	100	99.509	ENSACLG00000016902	rbm47	100	99.509	Astatotilapia_calliptera
ENSPNYG00000022868	rbm47	100	82.362	ENSAMXG00000021794	rbm47	100	81.392	Astyanax_mexicanus
ENSPNYG00000022868	rbm47	100	75.407	ENSBTAG00000002356	RBM47	100	75.896	Bos_taurus
ENSPNYG00000022868	rbm47	95	85.434	ENSCJAG00000019385	RBM47	100	82.429	Callithrix_jacchus
ENSPNYG00000022868	rbm47	94	77.375	ENSCAFG00000015898	RBM47	100	75.367	Canis_familiaris
ENSPNYG00000022868	rbm47	81	79.637	ENSCAFG00020010558	RBM47	94	81.137	Canis_lupus_dingo
ENSPNYG00000022868	rbm47	100	75.407	ENSCHIG00000026214	RBM47	100	75.896	Capra_hircus
ENSPNYG00000022868	rbm47	84	67.442	ENSTSYG00000033612	RBM47	93	66.279	Carlito_syrichta
ENSPNYG00000022868	rbm47	100	71.242	ENSCAPG00000008426	RBM47	100	73.834	Cavia_aperea
ENSPNYG00000022868	rbm47	100	81.234	ENSCPOG00000014100	RBM47	100	82.687	Cavia_porcellus
ENSPNYG00000022868	rbm47	100	82.732	ENSCCAG00000030129	-	100	82.732	Cebus_capucinus
ENSPNYG00000022868	rbm47	99	55.447	ENSCCAG00000024397	-	99	54.472	Cebus_capucinus
ENSPNYG00000022868	rbm47	95	84.831	ENSCATG00000042064	RBM47	100	82.687	Cercocebus_atys
ENSPNYG00000022868	rbm47	95	85.714	ENSCLAG00000001684	RBM47	100	82.687	Chinchilla_lanigera
ENSPNYG00000022868	rbm47	95	77.586	ENSCSAG00000017060	RBM47	100	76.509	Chlorocebus_sabaeus
ENSPNYG00000022868	rbm47	83	77.069	ENSCHOG00000011731	RBM47	88	76.149	Choloepus_hoffmanni
ENSPNYG00000022868	rbm47	100	77.273	ENSCPBG00000013831	RBM47	100	77.597	Chrysemys_picta_bellii
ENSPNYG00000022868	rbm47	95	85.714	ENSCANG00000019997	RBM47	100	82.732	Colobus_angolensis_palliatus
ENSPNYG00000022868	rbm47	100	81.186	ENSCGRG00001000623	-	100	82.216	Cricetulus_griseus_chok1gshd
ENSPNYG00000022868	rbm47	100	76.093	ENSCGRG00001020102	-	100	77.635	Cricetulus_griseus_chok1gshd
ENSPNYG00000022868	rbm47	89	75.835	ENSCGRG00000014760	-	100	77.378	Cricetulus_griseus_crigri
ENSPNYG00000022868	rbm47	100	75.081	ENSCGRG00000007762	-	100	77.059	Cricetulus_griseus_crigri
ENSPNYG00000022868	rbm47	95	90.172	ENSCSEG00000004545	rbm47	100	87.765	Cynoglossus_semilaevis
ENSPNYG00000022868	rbm47	100	89.268	ENSCVAG00000020144	rbm47	100	92.545	Cyprinodon_variegatus
ENSPNYG00000022868	rbm47	100	82.496	ENSDARG00000061985	rbm47	100	81.848	Danio_rerio
ENSPNYG00000022868	rbm47	95	76.804	ENSDNOG00000046854	RBM47	100	75.570	Dasypus_novemcinctus
ENSPNYG00000022868	rbm47	100	76.013	ENSDORG00000010144	Rbm47	100	76.337	Dipodomys_ordii
ENSPNYG00000022868	rbm47	100	75.649	ENSETEG00000009194	RBM47	100	76.299	Echinops_telfairi
ENSPNYG00000022868	rbm47	93	58.803	ENSEBUG00000011912	rbm47	98	58.151	Eptatretus_burgeri
ENSPNYG00000022868	rbm47	95	77.320	ENSEASG00005008443	RBM47	100	75.896	Equus_asinus_asinus
ENSPNYG00000022868	rbm47	95	77.320	ENSECAG00000004400	RBM47	100	75.896	Equus_caballus
ENSPNYG00000022868	rbm47	71	88.095	ENSEEUG00000001194	RBM47	75	81.405	Erinaceus_europaeus
ENSPNYG00000022868	rbm47	100	80.899	ENSELUG00000006148	rbm47	100	88.384	Esox_lucius
ENSPNYG00000022868	rbm47	95	77.625	ENSFCAG00000012399	RBM47	100	76.183	Felis_catus
ENSPNYG00000022868	rbm47	100	78.013	ENSFALG00000002861	RBM47	100	77.850	Ficedula_albicollis
ENSPNYG00000022868	rbm47	100	80.620	ENSFDAG00000016326	RBM47	100	80.362	Fukomys_damarensis
ENSPNYG00000022868	rbm47	100	88.725	ENSFHEG00000007938	rbm47	100	88.725	Fundulus_heteroclitus
ENSPNYG00000022868	rbm47	100	83.092	ENSGMOG00000014802	rbm47	100	82.287	Gadus_morhua
ENSPNYG00000022868	rbm47	63	83.805	ENSGALG00000014267	RBM47	99	83.805	Gallus_gallus
ENSPNYG00000022868	rbm47	63	89.351	ENSGAFG00000020571	rbm47	98	89.351	Gambusia_affinis
ENSPNYG00000022868	rbm47	100	89.268	ENSGACG00000016223	rbm47	100	90.746	Gasterosteus_aculeatus
ENSPNYG00000022868	rbm47	100	77.273	ENSGAGG00000020051	RBM47	100	77.597	Gopherus_agassizii
ENSPNYG00000022868	rbm47	95	84.831	ENSGGOG00000001367	RBM47	100	82.687	Gorilla_gorilla
ENSPNYG00000022868	rbm47	100	99.836	ENSHBUG00000003520	rbm47	100	99.836	Haplochromis_burtoni
ENSPNYG00000022868	rbm47	85	64.083	ENSHGLG00000016914	RBM47	100	78.235	Heterocephalus_glaber_female
ENSPNYG00000022868	rbm47	100	81.912	ENSHGLG00100014028	-	100	81.912	Heterocephalus_glaber_male
ENSPNYG00000022868	rbm47	100	68.515	ENSHGLG00100003071	-	100	68.189	Heterocephalus_glaber_male
ENSPNYG00000022868	rbm47	99	90.033	ENSHCOG00000002074	rbm47	99	93.573	Hippocampus_comes
ENSPNYG00000022868	rbm47	100	82.792	ENSIPUG00000004743	rbm47	100	82.305	Ictalurus_punctatus
ENSPNYG00000022868	rbm47	95	78.485	ENSSTOG00000004727	RBM47	100	82.687	Ictidomys_tridecemlineatus
ENSPNYG00000022868	rbm47	95	78.141	ENSJJAG00000013823	Rbm47	100	76.183	Jaculus_jaculus
ENSPNYG00000022868	rbm47	100	90.097	ENSKMAG00000000084	rbm47	100	92.051	Kryptolebias_marmoratus
ENSPNYG00000022868	rbm47	100	91.220	ENSLBEG00000008436	rbm47	99	92.545	Labrus_bergylta
ENSPNYG00000022868	rbm47	95	79.725	ENSLACG00000007196	RBM47	100	77.362	Latimeria_chalumnae
ENSPNYG00000022868	rbm47	95	83.677	ENSLOCG00000012966	rbm47	95	79.642	Lepisosteus_oculatus
ENSPNYG00000022868	rbm47	100	75.856	ENSLAFG00000011998	RBM47	100	76.346	Loxodonta_africana
ENSPNYG00000022868	rbm47	95	84.831	ENSMFAG00000037967	RBM47	100	82.687	Macaca_fascicularis
ENSPNYG00000022868	rbm47	95	77.586	ENSMMUG00000012036	RBM47	100	80.000	Macaca_mulatta
ENSPNYG00000022868	rbm47	95	84.551	ENSMNEG00000040774	RBM47	100	82.990	Macaca_nemestrina
ENSPNYG00000022868	rbm47	95	88.095	ENSMLEG00000041432	RBM47	100	83.792	Mandrillus_leucophaeus
ENSPNYG00000022868	rbm47	100	92.974	ENSMAMG00000019143	rbm47	99	95.596	Mastacembelus_armatus
ENSPNYG00000022868	rbm47	100	99.509	ENSMZEG00005023659	rbm47	100	99.509	Maylandia_zebra
ENSPNYG00000022868	rbm47	100	77.597	ENSMGAG00000012226	RBM47	100	77.435	Meleagris_gallopavo
ENSPNYG00000022868	rbm47	100	80.720	ENSMAUG00000006493	Rbm47	100	81.748	Mesocricetus_auratus
ENSPNYG00000022868	rbm47	94	81.921	ENSMICG00000026417	RBM47	100	80.103	Microcebus_murinus
ENSPNYG00000022868	rbm47	100	80.928	ENSMOCG00000021170	Rbm47	100	81.959	Microtus_ochrogaster
ENSPNYG00000022868	rbm47	100	91.993	ENSMMOG00000007260	rbm47	100	91.993	Mola_mola
ENSPNYG00000022868	rbm47	100	71.289	ENSMODG00000020561	-	100	70.962	Monodelphis_domestica
ENSPNYG00000022868	rbm47	51	78.481	ENSMODG00000015426	-	98	78.481	Monodelphis_domestica
ENSPNYG00000022868	rbm47	100	76.948	ENSMODG00000007003	RBM47	100	76.346	Monodelphis_domestica
ENSPNYG00000022868	rbm47	100	91.028	ENSMALG00000005167	rbm47	100	93.540	Monopterus_albus
ENSPNYG00000022868	rbm47	100	79.897	MGP_CAROLIEiJ_G0027258	Rbm47	100	80.928	Mus_caroli
ENSPNYG00000022868	rbm47	100	79.897	ENSMUSG00000070780	Rbm47	100	80.928	Mus_musculus
ENSPNYG00000022868	rbm47	100	80.155	MGP_PahariEiJ_G0017040	Rbm47	100	81.186	Mus_pahari
ENSPNYG00000022868	rbm47	100	79.897	MGP_SPRETEiJ_G0028253	Rbm47	100	80.928	Mus_spretus
ENSPNYG00000022868	rbm47	95	77.453	ENSMPUG00000006177	RBM47	94	76.183	Mustela_putorius_furo
ENSPNYG00000022868	rbm47	100	75.610	ENSMLUG00000000889	RBM47	100	75.447	Myotis_lucifugus
ENSPNYG00000022868	rbm47	100	75.570	ENSNGAG00000003325	Rbm47	100	75.896	Nannospalax_galili
ENSPNYG00000022868	rbm47	100	99.182	ENSNBRG00000015092	rbm47	100	99.182	Neolamprologus_brichardi
ENSPNYG00000022868	rbm47	95	84.831	ENSNLEG00000017151	RBM47	100	82.687	Nomascus_leucogenys
ENSPNYG00000022868	rbm47	69	80.425	ENSMEUG00000009516	-	99	80.425	Notamacropus_eugenii
ENSPNYG00000022868	rbm47	76	86.777	ENSOPRG00000016507	-	75	86.777	Ochotona_princeps
ENSPNYG00000022868	rbm47	95	77.453	ENSODEG00000004873	RBM47	100	76.346	Octodon_degus
ENSPNYG00000022868	rbm47	100	96.580	ENSONIG00000009061	rbm47	100	96.580	Oreochromis_niloticus
ENSPNYG00000022868	rbm47	100	75.204	ENSOANG00000008978	RBM47	100	75.693	Ornithorhynchus_anatinus
ENSPNYG00000022868	rbm47	100	75.204	ENSOCUG00000012034	RBM47	100	75.693	Oryctolagus_cuniculus
ENSPNYG00000022868	rbm47	100	91.028	ENSORLG00000005847	rbm47	100	91.028	Oryzias_latipes
ENSPNYG00000022868	rbm47	100	90.865	ENSORLG00020005154	rbm47	100	90.865	Oryzias_latipes_hni
ENSPNYG00000022868	rbm47	100	91.028	ENSORLG00015000066	rbm47	100	91.028	Oryzias_latipes_hsok
ENSPNYG00000022868	rbm47	100	90.850	ENSOMEG00000010730	rbm47	100	90.850	Oryzias_melastigma
ENSPNYG00000022868	rbm47	95	77.625	ENSOGAG00000029367	-	100	76.346	Otolemur_garnettii
ENSPNYG00000022868	rbm47	95	70.568	ENSOGAG00000025193	-	100	69.657	Otolemur_garnettii
ENSPNYG00000022868	rbm47	100	68.241	ENSOARG00000012711	RBM47	100	68.893	Ovis_aries
ENSPNYG00000022868	rbm47	95	77.586	ENSPPAG00000029763	RBM47	95	82.687	Pan_paniscus
ENSPNYG00000022868	rbm47	95	84.680	ENSPPRG00000012873	RBM47	100	82.171	Panthera_pardus
ENSPNYG00000022868	rbm47	84	75.000	ENSPTIG00000017046	RBM47	100	74.414	Panthera_tigris_altaica
ENSPNYG00000022868	rbm47	95	84.831	ENSPTRG00000016006	RBM47	100	82.687	Pan_troglodytes
ENSPNYG00000022868	rbm47	95	84.831	ENSPANG00000005980	RBM47	100	82.687	Papio_anubis
ENSPNYG00000022868	rbm47	100	86.788	ENSPKIG00000013431	RBM47	98	86.340	Paramormyrops_kingsleyae
ENSPNYG00000022868	rbm47	96	88.579	ENSPKIG00000005037	rbm47	100	77.362	Paramormyrops_kingsleyae
ENSPNYG00000022868	rbm47	89	79.159	ENSPSIG00000017516	RBM47	97	79.159	Pelodiscus_sinensis
ENSPNYG00000022868	rbm47	94	90.799	ENSPMGG00000018540	rbm47	100	87.561	Periophthalmus_magnuspinnatus
ENSPNYG00000022868	rbm47	100	80.928	ENSPEMG00000011088	Rbm47	100	81.959	Peromyscus_maniculatus_bairdii
ENSPNYG00000022868	rbm47	100	88.618	ENSPFOG00000007997	rbm47	100	88.618	Poecilia_formosa
ENSPNYG00000022868	rbm47	100	88.618	ENSPLAG00000002072	rbm47	100	89.091	Poecilia_latipinna
ENSPNYG00000022868	rbm47	100	88.618	ENSPMEG00000017492	rbm47	100	90.488	Poecilia_mexicana
ENSPNYG00000022868	rbm47	100	88.780	ENSPREG00000008456	rbm47	100	90.488	Poecilia_reticulata
ENSPNYG00000022868	rbm47	95	69.060	ENSPPYG00000014688	RBM47	98	69.283	Pongo_abelii
ENSPNYG00000022868	rbm47	81	79.369	ENSPCAG00000011879	RBM47	81	81.796	Procavia_capensis
ENSPNYG00000022868	rbm47	94	84.507	ENSPCOG00000023451	RBM47	100	81.395	Propithecus_coquereli
ENSPNYG00000022868	rbm47	95	77.530	ENSPVAG00000003812	RBM47	100	75.935	Pteropus_vampyrus
ENSPNYG00000022868	rbm47	100	83.199	ENSPNAG00000007940	rbm47	100	82.714	Pygocentrus_nattereri
ENSPNYG00000022868	rbm47	100	74.756	ENSRNOG00000002408	Rbm47	100	75.570	Rattus_norvegicus
ENSPNYG00000022868	rbm47	95	85.754	ENSRBIG00000039601	RBM47	100	82.732	Rhinopithecus_bieti
ENSPNYG00000022868	rbm47	95	85.754	ENSRROG00000044696	RBM47	100	82.732	Rhinopithecus_roxellana
ENSPNYG00000022868	rbm47	100	72.268	ENSSBOG00000028475	RBM47	100	79.074	Saimiri_boliviensis_boliviensis
ENSPNYG00000022868	rbm47	100	76.183	ENSSHAG00000017576	RBM47	100	76.183	Sarcophilus_harrisii
ENSPNYG00000022868	rbm47	98	77.980	ENSSFOG00015024101	RBM47	99	77.076	Scleropages_formosus
ENSPNYG00000022868	rbm47	94	85.090	ENSSFOG00015012445	rbm47	100	77.488	Scleropages_formosus
ENSPNYG00000022868	rbm47	100	90.701	ENSSMAG00000009744	rbm47	100	93.023	Scophthalmus_maximus
ENSPNYG00000022868	rbm47	100	93.053	ENSSDUG00000022684	rbm47	100	93.053	Seriola_dumerili
ENSPNYG00000022868	rbm47	100	92.569	ENSSLDG00000003109	rbm47	100	93.639	Seriola_lalandi_dorsalis
ENSPNYG00000022868	rbm47	84	78.091	ENSSARG00000001735	RBM47	75	80.260	Sorex_araneus
ENSPNYG00000022868	rbm47	100	82.564	ENSSPUG00000007515	RBM47	100	82.564	Sphenodon_punctatus
ENSPNYG00000022868	rbm47	100	93.496	ENSSPAG00000001257	rbm47	100	94.602	Stegastes_partitus
ENSPNYG00000022868	rbm47	95	85.196	ENSSSCG00000008796	RBM47	100	75.570	Sus_scrofa
ENSPNYG00000022868	rbm47	100	77.472	ENSTGUG00000008705	RBM47	100	78.444	Taeniopygia_guttata
ENSPNYG00000022868	rbm47	100	87.234	ENSTRUG00000014050	rbm47	100	87.234	Takifugu_rubripes
ENSPNYG00000022868	rbm47	100	90.196	ENSTNIG00000006127	rbm47	100	90.196	Tetraodon_nigroviridis
ENSPNYG00000022868	rbm47	71	83.616	ENSTBEG00000001607	RBM47	76	80.362	Tupaia_belangeri
ENSPNYG00000022868	rbm47	95	78.007	ENSTTRG00000002839	RBM47	100	75.733	Tursiops_truncatus
ENSPNYG00000022868	rbm47	95	78.485	ENSUAMG00000021346	RBM47	100	76.183	Ursus_americanus
ENSPNYG00000022868	rbm47	53	83.333	ENSVPAG00000000641	-	56	75.796	Vicugna_pacos
ENSPNYG00000022868	rbm47	94	77.547	ENSVVUG00000014774	RBM47	100	75.204	Vulpes_vulpes
ENSPNYG00000022868	rbm47	100	76.786	ENSXETG00000012802	rbm47	100	76.136	Xenopus_tropicalis
ENSPNYG00000022868	rbm47	89	89.351	ENSXCOG00000000780	rbm47	100	89.351	Xiphophorus_couchianus
ENSPNYG00000022868	rbm47	100	88.455	ENSXMAG00000009874	rbm47	100	90.746	Xiphophorus_maculatus