EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000023088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3692 bases
Position: chrJH419524.1:125432-129123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	1	6
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	2	6
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	3	6
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	4	6
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	5	6
ENSPNYP00000030634	zf-C2H2	PF00096.26	9.8e-31	6	6
ENSPNYP00000030633	zf-C2H2	PF00096.26	1.4e-25	1	3
ENSPNYP00000030633	zf-C2H2	PF00096.26	1.4e-25	2	3
ENSPNYP00000030633	zf-C2H2	PF00096.26	1.4e-25	3	3
ENSPNYP00000030634	zf-met	PF12874.7	5.9e-15	1	3
ENSPNYP00000030634	zf-met	PF12874.7	5.9e-15	2	3
ENSPNYP00000030634	zf-met	PF12874.7	5.9e-15	3	3
ENSPNYP00000030633	zf-met	PF12874.7	2.4e-11	1	2
ENSPNYP00000030633	zf-met	PF12874.7	2.4e-11	2	2
ENSPNYP00000030634	zf-C2H2_jaz	PF12171.8	5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000031378	-	789	-	ENSPNYP00000030634	262 (aa)	-	-
ENSPNYT00000031377	-	1410	-	ENSPNYP00000030633	469 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000023088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000023088	-	84	55.417	ENSPNYG00000022104	-	96	44.670
ENSPNYG00000023088	-	84	43.038	ENSPNYG00000017888	-	54	50.467
ENSPNYG00000023088	-	82	46.269	ENSPNYG00000002684	-	91	46.617
ENSPNYG00000023088	-	84	43.256	ENSPNYG00000007597	-	86	43.256
ENSPNYG00000023088	-	88	41.014	ENSPNYG00000003392	-	96	41.014
ENSPNYG00000023088	-	79	44.094	ENSPNYG00000003834	-	89	44.094
ENSPNYG00000023088	-	82	40.580	ENSPNYG00000019343	-	79	40.000
ENSPNYG00000023088	-	84	40.602	ENSPNYG00000010420	-	53	42.241
ENSPNYG00000023088	-	89	40.351	ENSPNYG00000021795	-	65	33.333
ENSPNYG00000023088	-	84	30.315	ENSPNYG00000005794	-	56	31.395
ENSPNYG00000023088	-	82	37.190	ENSPNYG00000015486	-	58	45.000
ENSPNYG00000023088	-	84	43.578	ENSPNYG00000024243	-	93	43.578
ENSPNYG00000023088	-	84	41.053	ENSPNYG00000024244	-	85	42.222
ENSPNYG00000023088	-	88	43.981	ENSPNYG00000005777	-	84	43.981
ENSPNYG00000023088	-	92	36.364	ENSPNYG00000012877	znf236	67	45.902
ENSPNYG00000023088	-	82	43.038	ENSPNYG00000007756	-	74	42.424
ENSPNYG00000023088	-	73	36.932	ENSPNYG00000018422	gfi1b	54	38.462
ENSPNYG00000023088	-	81	44.248	ENSPNYG00000001254	-	72	44.248
ENSPNYG00000023088	-	82	44.118	ENSPNYG00000018372	-	52	41.844
ENSPNYG00000023088	-	84	48.148	ENSPNYG00000018920	-	84	48.148
ENSPNYG00000023088	-	51	30.579	ENSPNYG00000011901	si:dkey-89b17.4	50	30.579
ENSPNYG00000023088	-	81	42.273	ENSPNYG00000019820	-	70	42.273
ENSPNYG00000023088	-	81	47.619	ENSPNYG00000000713	-	50	40.698
ENSPNYG00000023088	-	82	42.236	ENSPNYG00000019325	-	72	38.728
ENSPNYG00000023088	-	81	36.552	ENSPNYG00000013542	patz1	50	32.886
ENSPNYG00000023088	-	82	47.297	ENSPNYG00000010799	-	74	47.297
ENSPNYG00000023088	-	82	41.772	ENSPNYG00000015217	snai2	68	35.714
ENSPNYG00000023088	-	81	37.946	ENSPNYG00000019549	-	94	40.000
ENSPNYG00000023088	-	84	44.907	ENSPNYG00000021571	-	82	44.907
ENSPNYG00000023088	-	84	43.678	ENSPNYG00000011987	-	69	43.678
ENSPNYG00000023088	-	82	45.894	ENSPNYG00000023916	-	79	40.367
ENSPNYG00000023088	-	81	44.079	ENSPNYG00000016157	-	51	40.816
ENSPNYG00000023088	-	82	43.558	ENSPNYG00000017980	-	73	43.229
ENSPNYG00000023088	-	82	45.000	ENSPNYG00000024192	-	61	45.000
ENSPNYG00000023088	-	83	36.406	ENSPNYG00000001524	ZNF319	89	35.909
ENSPNYG00000023088	-	85	40.761	ENSPNYG00000023736	-	57	39.326
ENSPNYG00000023088	-	81	43.256	ENSPNYG00000007972	-	83	43.519
ENSPNYG00000023088	-	97	39.474	ENSPNYG00000004668	zbtb47b	51	39.474
ENSPNYG00000023088	-	64	48.214	ENSPNYG00000007347	-	94	48.214
ENSPNYG00000023088	-	84	39.241	ENSPNYG00000001207	-	61	34.591
ENSPNYG00000023088	-	81	46.154	ENSPNYG00000017733	scrt1b	56	46.154
ENSPNYG00000023088	-	84	40.580	ENSPNYG00000005671	-	73	40.580
ENSPNYG00000023088	-	82	42.268	ENSPNYG00000001775	-	94	39.640
ENSPNYG00000023088	-	92	41.739	ENSPNYG00000015933	-	98	41.758
ENSPNYG00000023088	-	82	39.336	ENSPNYG00000011973	-	86	39.336
ENSPNYG00000023088	-	81	44.186	ENSPNYG00000008731	-	91	44.444
ENSPNYG00000023088	-	88	32.432	ENSPNYG00000015106	znf341	57	46.000
ENSPNYG00000023088	-	91	41.667	ENSPNYG00000010647	-	99	37.097
ENSPNYG00000023088	-	84	43.564	ENSPNYG00000015803	-	96	44.615
ENSPNYG00000023088	-	81	42.254	ENSPNYG00000000726	-	70	42.254
ENSPNYG00000023088	-	81	44.000	ENSPNYG00000007552	-	93	41.954
ENSPNYG00000023088	-	92	34.599	ENSPNYG00000016610	-	78	34.286
ENSPNYG00000023088	-	81	38.519	ENSPNYG00000023848	-	69	41.880
ENSPNYG00000023088	-	81	41.615	ENSPNYG00000003762	-	90	41.053
ENSPNYG00000023088	-	82	39.130	ENSPNYG00000011024	-	60	40.952
ENSPNYG00000023088	-	81	47.368	ENSPNYG00000005755	-	97	45.192
ENSPNYG00000023088	-	84	40.191	ENSPNYG00000016563	-	98	44.681
ENSPNYG00000023088	-	92	49.091	ENSPNYG00000005202	-	98	49.091
ENSPNYG00000023088	-	81	44.920	ENSPNYG00000019565	-	94	44.920
ENSPNYG00000023088	-	81	43.478	ENSPNYG00000018779	-	91	44.348
ENSPNYG00000023088	-	82	42.945	ENSPNYG00000017141	-	75	44.361
ENSPNYG00000023088	-	81	44.444	ENSPNYG00000003684	-	96	46.218
ENSPNYG00000023088	-	98	35.821	ENSPNYG00000010637	-	76	37.436
ENSPNYG00000023088	-	91	39.352	ENSPNYG00000009786	-	50	39.352
ENSPNYG00000023088	-	84	35.338	ENSPNYG00000012194	prdm5	74	38.075
ENSPNYG00000023088	-	82	46.825	ENSPNYG00000002873	-	61	48.739
ENSPNYG00000023088	-	91	43.421	ENSPNYG00000018360	-	81	41.538
ENSPNYG00000023088	-	82	43.396	ENSPNYG00000019187	-	88	37.190
ENSPNYG00000023088	-	85	31.159	ENSPNYG00000017692	znf646	84	35.185
ENSPNYG00000023088	-	88	40.288	ENSPNYG00000007814	-	92	42.683
ENSPNYG00000023088	-	74	49.123	ENSPNYG00000006306	-	100	49.123
ENSPNYG00000023088	-	78	38.554	ENSPNYG00000006847	-	50	36.806
ENSPNYG00000023088	-	82	47.090	ENSPNYG00000020737	-	84	47.090
ENSPNYG00000023088	-	82	45.370	ENSPNYG00000002699	-	94	46.667
ENSPNYG00000023088	-	82	38.365	ENSPNYG00000005945	-	79	39.130
ENSPNYG00000023088	-	82	43.165	ENSPNYG00000018597	-	97	40.690
ENSPNYG00000023088	-	86	39.521	ENSPNYG00000009360	-	55	35.789
ENSPNYG00000023088	-	82	44.444	ENSPNYG00000008664	-	89	44.444
ENSPNYG00000023088	-	82	42.512	ENSPNYG00000009700	-	54	42.512
ENSPNYG00000023088	-	82	44.186	ENSPNYG00000019241	-	88	42.442
ENSPNYG00000023088	-	81	46.043	ENSPNYG00000004923	-	68	46.043
ENSPNYG00000023088	-	87	38.235	ENSPNYG00000005296	-	93	38.938
ENSPNYG00000023088	-	81	42.529	ENSPNYG00000003744	-	91	50.000
ENSPNYG00000023088	-	83	39.394	ENSPNYG00000012572	zbtb17	54	42.553
ENSPNYG00000023088	-	82	41.053	ENSPNYG00000020245	-	72	41.053
ENSPNYG00000023088	-	82	42.791	ENSPNYG00000019368	-	80	46.341
ENSPNYG00000023088	-	82	44.920	ENSPNYG00000018616	-	81	38.942
ENSPNYG00000023088	-	82	45.000	ENSPNYG00000019503	-	92	56.818
ENSPNYG00000023088	-	89	45.098	ENSPNYG00000021671	-	90	45.098
ENSPNYG00000023088	-	82	40.517	ENSPNYG00000020699	-	92	40.517
ENSPNYG00000023088	-	87	41.026	ENSPNYG00000013109	scrt2	55	41.026
ENSPNYG00000023088	-	82	40.741	ENSPNYG00000019219	-	67	44.262
ENSPNYG00000023088	-	82	45.833	ENSPNYG00000019396	-	87	45.833
ENSPNYG00000023088	-	84	43.318	ENSPNYG00000022227	-	59	37.959
ENSPNYG00000023088	-	82	42.105	ENSPNYG00000023637	-	74	40.260
ENSPNYG00000023088	-	81	38.931	ENSPNYG00000000700	-	57	38.235
ENSPNYG00000023088	-	82	37.895	ENSPNYG00000020716	-	92	44.872
ENSPNYG00000023088	-	84	40.845	ENSPNYG00000022330	-	59	39.456
ENSPNYG00000023088	-	92	35.808	ENSPNYG00000007781	-	96	35.808
ENSPNYG00000023088	-	82	43.005	ENSPNYG00000023882	-	63	43.005
ENSPNYG00000023088	-	82	45.098	ENSPNYG00000021217	-	75	46.610
ENSPNYG00000023088	-	82	38.182	ENSPNYG00000024183	zgc:173577	96	38.182
ENSPNYG00000023088	-	82	38.824	ENSPNYG00000022345	znf526	56	40.945
ENSPNYG00000023088	-	82	38.788	ENSPNYG00000022622	ZNF384	52	38.788
ENSPNYG00000023088	-	54	43.103	ENSPNYG00000001708	-	93	43.103
ENSPNYG00000023088	-	96	34.981	ENSPNYG00000012188	-	86	34.981
ENSPNYG00000023088	-	81	42.935	ENSPNYG00000002862	-	50	41.379
ENSPNYG00000023088	-	82	34.783	ENSPNYG00000022279	PRDM15	51	34.839
ENSPNYG00000023088	-	87	36.638	ENSPNYG00000022271	znf319b	96	36.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023088	-	90	73.810	ENSAPOG00000001563	-	98	65.659	Acanthochromis_polyacanthus
ENSPNYG00000023088	-	90	64.158	ENSACIG00000015411	-	82	94.340	Amphilophus_citrinellus
ENSPNYG00000023088	-	67	85.774	ENSAOCG00000013505	-	65	85.417	Amphiprion_ocellaris
ENSPNYG00000023088	-	93	71.094	ENSAOCG00000013589	-	96	71.094	Amphiprion_ocellaris
ENSPNYG00000023088	-	60	85.774	ENSAPEG00000022756	-	60	85.417	Amphiprion_percula
ENSPNYG00000023088	-	93	75.217	ENSAPEG00000022774	-	92	75.217	Amphiprion_percula
ENSPNYG00000023088	-	95	76.263	ENSATEG00000019261	-	86	76.263	Anabas_testudineus
ENSPNYG00000023088	-	54	99.149	ENSACLG00000008606	-	87	99.149	Astatotilapia_calliptera
ENSPNYG00000023088	-	90	99.462	ENSACLG00000008624	-	81	99.462	Astatotilapia_calliptera
ENSPNYG00000023088	-	94	65.660	ENSCSEG00000008903	-	96	60.556	Cynoglossus_semilaevis
ENSPNYG00000023088	-	54	82.988	ENSCVAG00000016534	-	50	82.988	Cyprinodon_variegatus
ENSPNYG00000023088	-	83	63.090	ENSGMOG00000000494	-	98	63.519	Gadus_morhua
ENSPNYG00000023088	-	92	70.312	ENSGAFG00000002659	-	69	76.210	Gambusia_affinis
ENSPNYG00000023088	-	92	74.569	ENSGACG00000001377	-	93	85.654	Gasterosteus_aculeatus
ENSPNYG00000023088	-	100	99.618	ENSHBUG00000008502	-	100	99.618	Haplochromis_burtoni
ENSPNYG00000023088	-	94	68.030	ENSHCOG00000000511	-	92	54.286	Hippocampus_comes
ENSPNYG00000023088	-	92	74.359	ENSLBEG00000018509	-	93	76.316	Labrus_bergylta
ENSPNYG00000023088	-	89	73.896	ENSMAMG00000018137	-	59	87.917	Mastacembelus_armatus
ENSPNYG00000023088	-	100	98.864	ENSMZEG00005002583	-	100	98.864	Maylandia_zebra
ENSPNYG00000023088	-	79	75.916	ENSMMOG00000009733	-	99	75.916	Mola_mola
ENSPNYG00000023088	-	84	58.857	ENSMALG00000019991	-	96	69.767	Monopterus_albus
ENSPNYG00000023088	-	100	80.755	ENSNBRG00000008223	-	82	99.167	Neolamprologus_brichardi
ENSPNYG00000023088	-	84	84.937	ENSONIG00000017233	-	95	99.576	Oreochromis_niloticus
ENSPNYG00000023088	-	78	60.109	ENSOMEG00000016463	-	79	60.109	Oryzias_melastigma
ENSPNYG00000023088	-	92	50.199	ENSPMGG00000002384	-	88	63.415	Periophthalmus_magnuspinnatus
ENSPNYG00000023088	-	92	69.531	ENSPFOG00000006287	-	67	81.667	Poecilia_formosa
ENSPNYG00000023088	-	92	69.531	ENSPMEG00000005897	-	62	81.667	Poecilia_mexicana
ENSPNYG00000023088	-	92	65.289	ENSPREG00000021246	-	93	82.083	Poecilia_reticulata
ENSPNYG00000023088	-	90	74.502	ENSSDUG00000004892	-	68	88.333	Seriola_dumerili
ENSPNYG00000023088	-	84	75.258	ENSSLDG00000005670	-	91	83.077	Seriola_lalandi_dorsalis
ENSPNYG00000023088	-	90	79.808	ENSSPAG00000022219	-	65	79.808	Stegastes_partitus
ENSPNYG00000023088	-	84	76.018	ENSTNIG00000011188	-	99	85.232	Tetraodon_nigroviridis
ENSPNYG00000023088	-	92	70.312	ENSXMAG00000000866	-	54	81.250	Xiphophorus_maculatus