EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000023102 (Gene tree)
Gene ID: 102191972
Gene Symbol: -
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 12668 bases
Position: chrJH419385.1:534235-546902
Accession: 102191972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000030666	RRM_1	PF00076.22	5e-07	1	1
ENSPNYP00000030658	RRM_1	PF00076.22	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000031410	-	5992	XM_005746599	ENSPNYP00000030666	1136 (aa)	XP_005746656	UPI0003AFB024
ENSPNYT00000031402	-	6085	-	ENSPNYP00000030658	1095 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000023102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023102	-	85	78.586	ENSATEG00000002140	-	100	74.524	Anabas_testudineus
ENSPNYG00000023102	-	99	98.070	ENSACLG00000002010	-	100	98.070	Astatotilapia_calliptera
ENSPNYG00000023102	-	67	79.531	ENSCVAG00000019389	-	91	81.216	Cyprinodon_variegatus
ENSPNYG00000023102	-	58	59.748	ENSFALG00000008076	-	65	59.133	Ficedula_albicollis
ENSPNYG00000023102	-	65	81.142	ENSKMAG00000004031	-	100	73.855	Kryptolebias_marmoratus
ENSPNYG00000023102	-	66	79.584	ENSPLAG00000017417	-	61	81.622	Poecilia_latipinna
ENSPNYG00000023102	-	96	81.081	ENSPMEG00000007437	-	88	81.081	Poecilia_mexicana
ENSPNYG00000023102	-	63	81.129	ENSPMEG00000017911	-	61	81.129	Poecilia_mexicana
ENSPNYG00000023102	-	68	76.885	ENSPREG00000012680	-	60	80.811	Poecilia_reticulata
ENSPNYG00000023102	-	85	83.110	ENSSPAG00000006625	-	99	82.121	Stegastes_partitus
ENSPNYG00000023102	-	65	81.216	ENSXMAG00000003256	-	61	81.216	Xiphophorus_maculatus