EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000023810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 2622 bases
Position: chrJH419550.1:188790-191411
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031571	MMR_HSR1	PF01926.23	6.3e-07	1	1
ENSPNYP00000031569	MMR_HSR1	PF01926.23	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032324	-	669	-	ENSPNYP00000031569	222 (aa)	-	-
ENSPNYT00000032326	-	624	-	ENSPNYP00000031571	207 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000023810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000023810	-	90	30.890	ENSPNYG00000010861	rab6bb	93	30.890
ENSPNYG00000023810	-	55	44.248	ENSPNYG00000009728	rab30	52	44.248
ENSPNYG00000023810	-	95	75.000	ENSPNYG00000004098	rab11bb	98	75.000
ENSPNYG00000023810	-	72	40.260	ENSPNYG00000010612	rab5aa	70	40.260
ENSPNYG00000023810	-	90	37.563	ENSPNYG00000010615	rab5c	69	42.208
ENSPNYG00000023810	-	67	40.559	ENSPNYG00000010325	rab42a	54	40.559
ENSPNYG00000023810	-	53	47.706	ENSPNYG00000009490	si:dkey-16l2.16	52	47.706
ENSPNYG00000023810	-	52	38.318	ENSPNYG00000017153	rab34b	60	38.318
ENSPNYG00000023810	-	58	40.800	ENSPNYG00000022091	RAB15	59	40.800
ENSPNYG00000023810	-	62	33.333	ENSPNYG00000020556	rab6a	67	33.333
ENSPNYG00000023810	-	57	31.405	ENSPNYG00000013814	KRAS	70	33.083
ENSPNYG00000023810	-	90	43.979	ENSPNYG00000012426	rab2a	89	43.979
ENSPNYG00000023810	-	97	65.753	ENSPNYG00000018244	rab11al	99	65.753
ENSPNYG00000023810	-	66	41.259	ENSPNYG00000008498	-	63	41.259
ENSPNYG00000023810	-	61	33.333	ENSPNYG00000018613	si:dkey-13a21.4	64	33.333
ENSPNYG00000023810	-	78	33.728	ENSPNYG00000020409	RAB7A	81	33.728
ENSPNYG00000023810	-	60	33.333	ENSPNYG00000019639	rab23	68	34.783
ENSPNYG00000023810	-	85	38.587	ENSPNYG00000004681	-	92	38.587
ENSPNYG00000023810	-	54	54.054	ENSPNYG00000015841	-	56	53.097
ENSPNYG00000023810	-	95	71.296	ENSPNYG00000002252	rab11a	98	71.296
ENSPNYG00000023810	-	79	56.831	ENSPNYG00000018214	rab25b	87	56.831
ENSPNYG00000023810	-	50	33.333	ENSPNYG00000015355	RAB29	51	33.333
ENSPNYG00000023810	-	56	36.441	ENSPNYG00000004845	rabl2	53	36.441
ENSPNYG00000023810	-	80	57.609	ENSPNYG00000010491	rab25a	86	57.609
ENSPNYG00000023810	-	57	44.915	ENSPNYG00000007064	rab18a	58	44.915
ENSPNYG00000023810	-	66	31.915	ENSPNYG00000019963	rab6ba	73	31.915
ENSPNYG00000023810	-	71	48.684	ENSPNYG00000005326	-	70	48.684
ENSPNYG00000023810	-	97	74.545	ENSPNYG00000019611	-	100	74.545
ENSPNYG00000023810	-	57	31.405	ENSPNYG00000015124	hrasb	69	33.083
ENSPNYG00000023810	-	54	45.946	ENSPNYG00000000512	rab15	52	45.946
ENSPNYG00000023810	-	64	34.559	ENSPNYG00000013288	rab41	64	34.559
ENSPNYG00000023810	-	65	39.286	ENSPNYG00000000233	rab9b	63	39.286
ENSPNYG00000023810	-	58	30.645	ENSPNYG00000005416	si:ch73-116o1.2	65	33.088
ENSPNYG00000023810	-	77	34.807	ENSPNYG00000012922	zgc:101559	76	34.807
ENSPNYG00000023810	-	65	42.029	ENSPNYG00000015774	RAB39B	65	42.029
ENSPNYG00000023810	-	97	77.273	ENSPNYG00000019644	rab11ba	100	77.273
ENSPNYG00000023810	-	62	44.030	ENSPNYG00000011135	RAB17	61	42.553
ENSPNYG00000023810	-	70	41.611	ENSPNYG00000001751	rab18b	71	41.611
ENSPNYG00000023810	-	72	41.558	ENSPNYG00000015851	-	68	41.558
ENSPNYG00000023810	-	54	54.054	ENSPNYG00000009172	rab1ab	56	53.097
ENSPNYG00000023810	-	70	36.000	ENSPNYG00000003511	-	61	36.000
ENSPNYG00000023810	-	78	33.728	ENSPNYG00000005809	-	87	32.258
ENSPNYG00000023810	-	73	42.857	ENSPNYG00000007520	-	79	42.857
ENSPNYG00000023810	-	91	42.564	ENSPNYG00000007314	-	90	42.564
ENSPNYG00000023810	-	65	42.029	ENSPNYG00000019276	-	65	42.029
ENSPNYG00000023810	-	55	30.000	ENSPNYG00000002408	-	59	30.000
ENSPNYG00000023810	-	54	54.955	ENSPNYG00000010377	rab1ba	55	54.955
ENSPNYG00000023810	-	66	44.286	ENSPNYG00000007156	rab35b	69	44.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023810	-	90	78.537	ENSG00000185236	RAB11B	95	77.907	Homo_sapiens
ENSPNYG00000023810	-	90	77.404	ENSAMEG00000004955	RAB11B	93	77.404	Ailuropoda_melanoleuca
ENSPNYG00000023810	-	82	74.603	ENSACIG00000024374	rab11ba	77	74.603	Amphilophus_citrinellus
ENSPNYG00000023810	-	97	75.909	ENSAOCG00000018050	rab11ba	100	75.909	Amphiprion_ocellaris
ENSPNYG00000023810	-	97	75.455	ENSAPEG00000009177	rab11ba	100	75.455	Amphiprion_percula
ENSPNYG00000023810	-	97	75.909	ENSATEG00000023730	rab11ba	100	75.909	Anabas_testudineus
ENSPNYG00000023810	-	90	78.537	ENSANAG00000037616	RAB11B	95	77.907	Aotus_nancymaae
ENSPNYG00000023810	-	97	77.273	ENSACLG00000005420	rab11ba	100	77.273	Astatotilapia_calliptera
ENSPNYG00000023810	-	91	87.981	ENSACLG00000018852	-	93	87.981	Astatotilapia_calliptera
ENSPNYG00000023810	-	85	68.205	WBGene00004274	rab-11.1	91	68.205	Caenorhabditis_elegans
ENSPNYG00000023810	-	90	78.537	ENSCJAG00000010778	RAB11B	95	77.907	Callithrix_jacchus
ENSPNYG00000023810	-	90	78.537	ENSCAFG00000032060	RAB11B	93	78.537	Canis_familiaris
ENSPNYG00000023810	-	90	78.537	ENSCAFG00020022184	RAB11B	93	78.537	Canis_lupus_dingo
ENSPNYG00000023810	-	90	78.537	ENSTSYG00000014758	RAB11B	93	78.537	Carlito_syrichta
ENSPNYG00000023810	-	95	75.000	ENSCPOG00000030154	RAB11B	98	75.000	Cavia_porcellus
ENSPNYG00000023810	-	90	78.537	ENSCCAG00000031042	RAB11B	94	77.907	Cebus_capucinus
ENSPNYG00000023810	-	90	78.537	ENSCLAG00000003207	RAB11B	93	78.537	Chinchilla_lanigera
ENSPNYG00000023810	-	90	78.537	ENSCSAG00000008024	RAB11B	93	78.537	Chlorocebus_sabaeus
ENSPNYG00000023810	-	90	67.980	ENSCHOG00000013525	RAB11B	93	67.980	Choloepus_hoffmanni
ENSPNYG00000023810	-	90	70.244	ENSCING00000009526	-	94	70.244	Ciona_intestinalis
ENSPNYG00000023810	-	90	78.537	ENSCANG00000040517	RAB11B	93	78.537	Colobus_angolensis_palliatus
ENSPNYG00000023810	-	90	78.537	ENSCGRG00001013827	Rab11b	93	78.537	Cricetulus_griseus_chok1gshd
ENSPNYG00000023810	-	90	78.537	ENSCGRG00000010967	Rab11b	93	78.537	Cricetulus_griseus_crigri
ENSPNYG00000023810	-	90	79.512	ENSCSEG00000007121	rab11ba	79	79.512	Cynoglossus_semilaevis
ENSPNYG00000023810	-	90	78.049	ENSDARG00000041878	rab11ba	93	78.049	Danio_rerio
ENSPNYG00000023810	-	90	77.073	ENSDNOG00000004134	-	93	77.073	Dasypus_novemcinctus
ENSPNYG00000023810	-	90	78.537	ENSDNOG00000014618	RAB11B	90	78.537	Dasypus_novemcinctus
ENSPNYG00000023810	-	90	78.537	ENSDORG00000006304	Rab11b	93	78.537	Dipodomys_ordii
ENSPNYG00000023810	-	90	76.214	ENSEBUG00000011775	rab11ba	92	76.214	Eptatretus_burgeri
ENSPNYG00000023810	-	90	65.700	ENSEBUG00000015447	-	94	65.700	Eptatretus_burgeri
ENSPNYG00000023810	-	68	85.517	ENSEEUG00000009165	-	100	85.517	Erinaceus_europaeus
ENSPNYG00000023810	-	86	75.000	ENSELUG00000019240	-	99	75.000	Esox_lucius
ENSPNYG00000023810	-	95	75.000	ENSFCAG00000015216	RAB11B	97	76.168	Felis_catus
ENSPNYG00000023810	-	95	75.000	ENSFDAG00000019872	RAB11B	98	75.000	Fukomys_damarensis
ENSPNYG00000023810	-	97	74.545	ENSFHEG00000022642	rab11ba	100	74.545	Fundulus_heteroclitus
ENSPNYG00000023810	-	90	78.049	ENSGMOG00000007390	rab11ba	93	78.049	Gadus_morhua
ENSPNYG00000023810	-	97	75.000	ENSGAFG00000005679	rab11ba	100	75.000	Gambusia_affinis
ENSPNYG00000023810	-	90	79.512	ENSGAGG00000012557	-	93	79.512	Gopherus_agassizii
ENSPNYG00000023810	-	90	78.537	ENSHGLG00000014984	RAB11B	93	78.537	Heterocephalus_glaber_female
ENSPNYG00000023810	-	90	78.537	ENSHGLG00100003638	RAB11B	93	78.537	Heterocephalus_glaber_male
ENSPNYG00000023810	-	90	78.537	ENSSTOG00000031571	RAB11B	93	78.537	Ictidomys_tridecemlineatus
ENSPNYG00000023810	-	90	78.537	ENSJJAG00000018891	Rab11b	93	78.537	Jaculus_jaculus
ENSPNYG00000023810	-	97	75.455	ENSKMAG00000006082	-	100	75.455	Kryptolebias_marmoratus
ENSPNYG00000023810	-	90	78.537	ENSLBEG00000006087	rab11ba	94	78.537	Labrus_bergylta
ENSPNYG00000023810	-	74	78.488	ENSLACG00000016974	RAB11B	99	78.488	Latimeria_chalumnae
ENSPNYG00000023810	-	90	78.537	ENSLAFG00000013598	RAB11B	93	78.537	Loxodonta_africana
ENSPNYG00000023810	-	90	78.537	ENSMNEG00000039759	-	93	78.537	Macaca_nemestrina
ENSPNYG00000023810	-	97	75.000	ENSMAMG00000018556	rab11ba	100	75.000	Mastacembelus_armatus
ENSPNYG00000023810	-	97	77.273	ENSMZEG00005010947	rab11ba	100	77.273	Maylandia_zebra
ENSPNYG00000023810	-	91	87.981	ENSMZEG00005019251	-	93	87.981	Maylandia_zebra
ENSPNYG00000023810	-	97	74.091	ENSMAUG00000021579	Rab11b	100	74.091	Mesocricetus_auratus
ENSPNYG00000023810	-	95	75.000	ENSMOCG00000012667	Rab11b	98	75.000	Microtus_ochrogaster
ENSPNYG00000023810	-	97	72.273	ENSMALG00000021949	rab11ba	100	72.273	Monopterus_albus
ENSPNYG00000023810	-	90	78.537	MGP_CAROLIEiJ_G0021415	Rab11b	97	85.034	Mus_caroli
ENSPNYG00000023810	-	97	74.091	ENSMUSG00000077450	Rab11b	97	85.034	Mus_musculus
ENSPNYG00000023810	-	90	78.537	MGP_PahariEiJ_G0020420	Rab11b	93	78.537	Mus_pahari
ENSPNYG00000023810	-	90	78.537	MGP_SPRETEiJ_G0022327	Rab11b	97	85.034	Mus_spretus
ENSPNYG00000023810	-	95	75.000	ENSMPUG00000007263	RAB11B	98	75.000	Mustela_putorius_furo
ENSPNYG00000023810	-	90	75.000	ENSMLUG00000002308	-	93	75.000	Myotis_lucifugus
ENSPNYG00000023810	-	90	78.537	ENSNGAG00000015757	Rab11b	93	78.537	Nannospalax_galili
ENSPNYG00000023810	-	99	76.682	ENSNBRG00000023898	rab11ba	85	76.682	Neolamprologus_brichardi
ENSPNYG00000023810	-	90	78.537	ENSNLEG00000001733	RAB11B	93	78.537	Nomascus_leucogenys
ENSPNYG00000023810	-	90	78.537	ENSODEG00000011371	RAB11B	93	78.537	Octodon_degus
ENSPNYG00000023810	-	97	76.818	ENSONIG00000002535	rab11ba	100	76.818	Oreochromis_niloticus
ENSPNYG00000023810	-	68	77.987	ENSOCUG00000028208	RAB11B	64	76.687	Oryctolagus_cuniculus
ENSPNYG00000023810	-	90	79.024	ENSORLG00000015307	rab11ba	93	79.024	Oryzias_latipes
ENSPNYG00000023810	-	90	79.024	ENSORLG00020020816	rab11ba	93	79.024	Oryzias_latipes_hni
ENSPNYG00000023810	-	90	79.024	ENSORLG00015016946	rab11ba	82	74.888	Oryzias_latipes_hsok
ENSPNYG00000023810	-	90	79.024	ENSOMEG00000002581	rab11ba	93	79.024	Oryzias_melastigma
ENSPNYG00000023810	-	90	78.537	ENSOGAG00000003227	RAB11B	92	78.537	Otolemur_garnettii
ENSPNYG00000023810	-	90	78.537	ENSOARG00000003801	RAB11B	90	78.537	Ovis_aries
ENSPNYG00000023810	-	76	76.705	ENSPPRG00000010160	RAB11B	85	76.705	Panthera_pardus
ENSPNYG00000023810	-	90	78.537	ENSPEMG00000014536	Rab11b	93	78.537	Peromyscus_maniculatus_bairdii
ENSPNYG00000023810	-	74	72.674	ENSPMAG00000009335	-	82	72.674	Petromyzon_marinus
ENSPNYG00000023810	-	97	75.455	ENSPFOG00000006159	rab11ba	100	75.455	Poecilia_formosa
ENSPNYG00000023810	-	97	75.455	ENSPLAG00000014243	rab11ba	100	75.455	Poecilia_latipinna
ENSPNYG00000023810	-	97	75.455	ENSPMEG00000007917	rab11ba	75	75.455	Poecilia_mexicana
ENSPNYG00000023810	-	100	73.451	ENSPREG00000006357	rab11ba	80	73.451	Poecilia_reticulata
ENSPNYG00000023810	-	90	78.537	ENSPPYG00000009504	RAB11B	93	78.537	Pongo_abelii
ENSPNYG00000023810	-	90	69.231	ENSPCAG00000016118	RAB11B	93	69.231	Procavia_capensis
ENSPNYG00000023810	-	90	78.537	ENSPCOG00000028053	RAB11B	93	78.537	Propithecus_coquereli
ENSPNYG00000023810	-	70	83.784	ENSPCOG00000008655	-	100	83.784	Propithecus_coquereli
ENSPNYG00000023810	-	90	78.537	ENSPVAG00000009645	RAB11B	93	78.537	Pteropus_vampyrus
ENSPNYG00000023810	-	95	75.463	ENSPNAG00000006431	-	98	75.463	Pygocentrus_nattereri
ENSPNYG00000023810	-	90	79.512	ENSPNAG00000020475	rab11ba	93	79.512	Pygocentrus_nattereri
ENSPNYG00000023810	-	90	78.537	ENSRNOG00000007648	Rab11b	93	78.537	Rattus_norvegicus
ENSPNYG00000023810	-	90	78.537	ENSSBOG00000035094	RAB11B	95	77.907	Saimiri_boliviensis_boliviensis
ENSPNYG00000023810	-	97	75.455	ENSSDUG00000002965	rab11ba	100	75.455	Seriola_dumerili
ENSPNYG00000023810	-	97	75.455	ENSSLDG00000005221	rab11ba	100	75.455	Seriola_lalandi_dorsalis
ENSPNYG00000023810	-	97	75.455	ENSSPAG00000017313	rab11ba	100	75.455	Stegastes_partitus
ENSPNYG00000023810	-	90	78.537	ENSSSCG00000013600	RAB11B	93	78.537	Sus_scrofa
ENSPNYG00000023810	-	61	86.260	ENSTBEG00000014750	-	100	86.260	Tupaia_belangeri
ENSPNYG00000023810	-	90	78.537	ENSTTRG00000009758	RAB11B	93	78.537	Tursiops_truncatus
ENSPNYG00000023810	-	83	79.429	ENSUMAG00000014594	RAB11B	87	76.536	Ursus_maritimus
ENSPNYG00000023810	-	90	78.537	ENSVVUG00000025210	RAB11B	93	78.537	Vulpes_vulpes
ENSPNYG00000023810	-	95	74.537	ENSXETG00000021890	rab11b.2	96	75.701	Xenopus_tropicalis
ENSPNYG00000023810	-	63	84.211	ENSXCOG00000009194	-	98	84.444	Xiphophorus_couchianus
ENSPNYG00000023810	-	97	75.000	ENSXMAG00000013416	rab11ba	100	75.000	Xiphophorus_maculatus