EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000023848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6681 bases
Position: chrJH420597.1:1262-7942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031617	zf-C2H2	PF00096.26	6.9e-29	1	4
ENSPNYP00000031617	zf-C2H2	PF00096.26	6.9e-29	2	4
ENSPNYP00000031617	zf-C2H2	PF00096.26	6.9e-29	3	4
ENSPNYP00000031617	zf-C2H2	PF00096.26	6.9e-29	4	4
ENSPNYP00000031617	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032375	-	618	-	ENSPNYP00000031617	205 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000023848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000023848	-	73	58.333	ENSPNYG00000003684	-	95	58.333
ENSPNYG00000023848	-	81	40.000	ENSPNYG00000010637	-	77	40.000
ENSPNYG00000023848	-	70	45.690	ENSPNYG00000019219	-	66	45.690
ENSPNYG00000023848	-	68	37.313	ENSPNYG00000024183	zgc:173577	96	37.313
ENSPNYG00000023848	-	68	57.600	ENSPNYG00000001254	-	70	57.600
ENSPNYG00000023848	-	79	48.148	ENSPNYG00000011987	-	71	48.148
ENSPNYG00000023848	-	71	46.853	ENSPNYG00000003762	-	81	46.853
ENSPNYG00000023848	-	83	58.219	ENSPNYG00000002684	-	90	56.028
ENSPNYG00000023848	-	74	42.857	ENSPNYG00000001775	-	88	42.857
ENSPNYG00000023848	-	70	41.844	ENSPNYG00000012194	prdm5	69	41.844
ENSPNYG00000023848	-	77	51.471	ENSPNYG00000019396	-	85	51.471
ENSPNYG00000023848	-	71	47.407	ENSPNYG00000009700	-	56	47.407
ENSPNYG00000023848	-	68	55.645	ENSPNYG00000002873	-	61	55.645
ENSPNYG00000023848	-	78	50.360	ENSPNYG00000019343	-	85	50.360
ENSPNYG00000023848	-	80	56.115	ENSPNYG00000017141	-	84	57.143
ENSPNYG00000023848	-	71	46.429	ENSPNYG00000005671	-	72	46.429
ENSPNYG00000023848	-	80	43.972	ENSPNYG00000022104	-	92	43.972
ENSPNYG00000023848	-	70	56.643	ENSPNYG00000021217	-	77	56.643
ENSPNYG00000023848	-	95	45.070	ENSPNYG00000015803	-	93	48.201
ENSPNYG00000023848	-	80	51.429	ENSPNYG00000005202	-	97	53.165
ENSPNYG00000023848	-	70	38.462	ENSPNYG00000015217	snai2	57	38.462
ENSPNYG00000023848	-	76	43.066	ENSPNYG00000020699	-	92	43.066
ENSPNYG00000023848	-	70	41.135	ENSPNYG00000016563	-	97	41.135
ENSPNYG00000023848	-	80	42.553	ENSPNYG00000007781	-	97	42.553
ENSPNYG00000023848	-	72	43.885	ENSPNYG00000022271	znf319b	65	43.885
ENSPNYG00000023848	-	83	57.143	ENSPNYG00000007597	-	83	57.143
ENSPNYG00000023848	-	70	43.972	ENSPNYG00000021571	-	83	43.972
ENSPNYG00000023848	-	73	41.497	ENSPNYG00000016610	-	70	41.497
ENSPNYG00000023848	-	75	50.000	ENSPNYG00000019503	-	99	50.000
ENSPNYG00000023848	-	71	53.390	ENSPNYG00000007756	-	77	52.137
ENSPNYG00000023848	-	71	48.438	ENSPNYG00000017980	-	75	48.438
ENSPNYG00000023848	-	71	40.164	ENSPNYG00000024243	-	92	40.164
ENSPNYG00000023848	-	69	34.043	ENSPNYG00000013109	scrt2	51	34.043
ENSPNYG00000023848	-	85	46.364	ENSPNYG00000019187	-	72	47.518
ENSPNYG00000023848	-	71	43.357	ENSPNYG00000023637	-	73	43.357
ENSPNYG00000023848	-	70	50.000	ENSPNYG00000004923	-	66	50.000
ENSPNYG00000023848	-	68	55.738	ENSPNYG00000007347	-	92	55.738
ENSPNYG00000023848	-	67	41.803	ENSPNYG00000015486	-	50	41.803
ENSPNYG00000023848	-	68	59.000	ENSPNYG00000005755	-	69	59.000
ENSPNYG00000023848	-	70	45.522	ENSPNYG00000000700	-	52	45.522
ENSPNYG00000023848	-	70	57.246	ENSPNYG00000018779	-	90	57.246
ENSPNYG00000023848	-	71	36.471	ENSPNYG00000021795	-	57	36.471
ENSPNYG00000023848	-	70	40.845	ENSPNYG00000008664	-	86	40.845
ENSPNYG00000023848	-	71	40.741	ENSPNYG00000012572	zbtb17	51	48.889
ENSPNYG00000023848	-	70	44.915	ENSPNYG00000005777	-	83	44.915
ENSPNYG00000023848	-	70	56.643	ENSPNYG00000024192	-	62	56.643
ENSPNYG00000023848	-	69	41.880	ENSPNYG00000023088	-	81	38.519
ENSPNYG00000023848	-	70	40.260	ENSPNYG00000020716	-	92	40.260
ENSPNYG00000023848	-	69	50.877	ENSPNYG00000019820	-	73	50.877
ENSPNYG00000023848	-	78	44.792	ENSPNYG00000011024	-	68	46.154
ENSPNYG00000023848	-	80	57.143	ENSPNYG00000019368	-	81	57.143
ENSPNYG00000023848	-	70	48.718	ENSPNYG00000019325	-	60	48.718
ENSPNYG00000023848	-	98	55.556	ENSPNYG00000018597	-	84	55.556
ENSPNYG00000023848	-	70	45.455	ENSPNYG00000010647	-	94	45.455
ENSPNYG00000023848	-	69	50.000	ENSPNYG00000010799	-	55	50.000
ENSPNYG00000023848	-	70	50.562	ENSPNYG00000005945	-	70	50.562
ENSPNYG00000023848	-	77	60.000	ENSPNYG00000020245	-	74	60.000
ENSPNYG00000023848	-	99	52.083	ENSPNYG00000018360	-	82	52.083
ENSPNYG00000023848	-	69	45.455	ENSPNYG00000005296	-	92	40.714
ENSPNYG00000023848	-	70	44.304	ENSPNYG00000018422	gfi1b	53	44.304
ENSPNYG00000023848	-	81	44.755	ENSPNYG00000007814	-	89	50.360
ENSPNYG00000023848	-	78	56.897	ENSPNYG00000019549	-	94	56.897
ENSPNYG00000023848	-	69	56.667	ENSPNYG00000003744	-	87	56.667
ENSPNYG00000023848	-	77	44.643	ENSPNYG00000012877	znf236	59	44.643
ENSPNYG00000023848	-	81	45.810	ENSPNYG00000007552	-	99	49.231
ENSPNYG00000023848	-	76	41.573	ENSPNYG00000012188	-	89	41.573
ENSPNYG00000023848	-	69	52.518	ENSPNYG00000011973	-	86	52.518
ENSPNYG00000023848	-	72	50.407	ENSPNYG00000003392	-	93	50.407
ENSPNYG00000023848	-	59	58.824	ENSPNYG00000001708	-	69	58.824
ENSPNYG00000023848	-	71	44.828	ENSPNYG00000022227	-	52	44.828
ENSPNYG00000023848	-	69	44.681	ENSPNYG00000024244	-	86	44.681
ENSPNYG00000023848	-	72	48.936	ENSPNYG00000015933	-	92	48.936
ENSPNYG00000023848	-	72	43.220	ENSPNYG00000003834	-	86	43.220
ENSPNYG00000023848	-	70	49.296	ENSPNYG00000022330	-	55	49.296
ENSPNYG00000023848	-	71	55.085	ENSPNYG00000023736	-	50	55.085
ENSPNYG00000023848	-	68	37.864	ENSPNYG00000001207	-	68	37.864
ENSPNYG00000023848	-	71	50.847	ENSPNYG00000021671	-	84	50.847
ENSPNYG00000023848	-	70	44.286	ENSPNYG00000023882	-	64	44.286
ENSPNYG00000023848	-	80	55.714	ENSPNYG00000018616	-	67	55.714
ENSPNYG00000023848	-	73	60.839	ENSPNYG00000019565	-	95	60.839
ENSPNYG00000023848	-	75	44.604	ENSPNYG00000001524	ZNF319	87	44.604
ENSPNYG00000023848	-	98	57.692	ENSPNYG00000007972	-	89	57.692
ENSPNYG00000023848	-	69	56.522	ENSPNYG00000019241	-	82	52.857
ENSPNYG00000023848	-	69	52.542	ENSPNYG00000002862	-	50	52.542
ENSPNYG00000023848	-	70	34.234	ENSPNYG00000017733	scrt1b	52	35.227
ENSPNYG00000023848	-	70	50.000	ENSPNYG00000023916	-	75	50.000
ENSPNYG00000023848	-	70	57.343	ENSPNYG00000000726	-	67	57.343
ENSPNYG00000023848	-	72	41.781	ENSPNYG00000009360	-	56	41.781
ENSPNYG00000023848	-	83	56.338	ENSPNYG00000008731	-	90	57.143
ENSPNYG00000023848	-	68	58.462	ENSPNYG00000006306	-	92	58.462
ENSPNYG00000023848	-	71	58.865	ENSPNYG00000018920	-	84	58.865
ENSPNYG00000023848	-	70	51.190	ENSPNYG00000002699	-	96	51.190
ENSPNYG00000023848	-	70	41.958	ENSPNYG00000020737	-	80	41.958
ENSPNYG00000023848	-	75	35.075	ENSPNYG00000022279	PRDM15	51	35.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023848	-	68	61.538	ENSACIG00000010660	-	92	61.538	Amphilophus_citrinellus