EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000023850 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 3840 bases
Position: chrJH420606.1:7141-10980
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031620	RRM_1	PF00076.22	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032378	-	342	-	ENSPNYP00000031620	113 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000023850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000023850	-	89	46.154	ENSPNYG00000013107	-	70	45.238
ENSPNYG00000023850	-	94	39.024	ENSPNYG00000001514	ELAVL2	76	39.024
ENSPNYG00000023850	-	89	41.176	ENSPNYG00000013186	elavl3	66	41.176
ENSPNYG00000023850	-	89	44.048	ENSPNYG00000012769	elavl1a	68	44.048
ENSPNYG00000023850	-	69	58.974	ENSPNYG00000011502	-	73	58.974
ENSPNYG00000023850	-	90	38.272	ENSPNYG00000021720	elavl4	68	38.272
ENSPNYG00000023850	-	83	36.364	ENSPNYG00000000648	-	72	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023850	-	87	90.816	ENSKMAG00000004040	celf2	51	90.816	Kryptolebias_marmoratus
ENSPNYG00000023850	-	79	96.629	ENSLBEG00000005593	-	72	96.629	Labrus_bergylta
ENSPNYG00000023850	-	79	89.888	ENSPMAG00000008007	-	99	89.888	Petromyzon_marinus
ENSPNYG00000023850	-	82	94.624	ENSSSCG00000031855	-	53	94.624	Sus_scrofa