EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000023940 (Gene tree)
Gene ID: 102198215
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 4599 bases
Position: chrJH419553.1:437632-442230
Accession: 102198215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031740	Exo_endo_phos	PF03372.23	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032500	-	4031	XM_005752196	ENSPNYP00000031740	310 (aa)	XP_005752253	UPI0003AFEBB4

Gene Model

Click here to download ENSPNYG00000023940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023940	apex1	99	66.038	ENSG00000100823	APEX1	99	59.064	Homo_sapiens
ENSPNYG00000023940	apex1	100	88.710	ENSAPOG00000017002	apex1	97	90.508	Acanthochromis_polyacanthus
ENSPNYG00000023940	apex1	99	66.139	ENSAMEG00000005418	APEX1	87	71.014	Ailuropoda_melanoleuca
ENSPNYG00000023940	apex1	89	94.585	ENSACIG00000010653	apex1	93	94.545	Amphilophus_citrinellus
ENSPNYG00000023940	apex1	100	89.677	ENSAOCG00000009649	apex1	89	92.364	Amphiprion_ocellaris
ENSPNYG00000023940	apex1	100	90.000	ENSAPEG00000021453	apex1	89	92.727	Amphiprion_percula
ENSPNYG00000023940	apex1	99	92.233	ENSATEG00000002883	apex1	97	92.233	Anabas_testudineus
ENSPNYG00000023940	apex1	99	70.159	ENSACAG00000008099	APEX1	87	74.909	Anolis_carolinensis
ENSPNYG00000023940	apex1	99	67.089	ENSANAG00000030117	APEX1	86	72.364	Aotus_nancymaae
ENSPNYG00000023940	apex1	100	99.677	ENSACLG00000018441	apex1	100	99.677	Astatotilapia_calliptera
ENSPNYG00000023940	apex1	99	87.742	ENSAMXG00000034699	apex1	88	91.273	Astyanax_mexicanus
ENSPNYG00000023940	apex1	99	65.823	ENSBTAG00000002745	APEX1	87	70.290	Bos_taurus
ENSPNYG00000023940	apex1	98	43.137	WBGene00001372	exo-3	92	44.944	Caenorhabditis_elegans
ENSPNYG00000023940	apex1	99	67.089	ENSCJAG00000009726	APEX1	86	72.364	Callithrix_jacchus
ENSPNYG00000023940	apex1	99	66.456	ENSCAFG00000032033	APEX1	86	71.636	Canis_familiaris
ENSPNYG00000023940	apex1	53	59.412	ENSCAFG00020023002	-	72	68.217	Canis_lupus_dingo
ENSPNYG00000023940	apex1	99	66.456	ENSCAFG00020014377	-	86	71.636	Canis_lupus_dingo
ENSPNYG00000023940	apex1	99	65.823	ENSCHIG00000007298	-	87	70.290	Capra_hircus
ENSPNYG00000023940	apex1	87	57.196	ENSCHIG00000014537	-	86	57.196	Capra_hircus
ENSPNYG00000023940	apex1	99	65.190	ENSTSYG00000034813	APEX1	87	69.928	Carlito_syrichta
ENSPNYG00000023940	apex1	87	66.058	ENSCAPG00000016235	APEX1	91	72.458	Cavia_aperea
ENSPNYG00000023940	apex1	99	67.722	ENSCPOG00000030909	APEX1	86	72.727	Cavia_porcellus
ENSPNYG00000023940	apex1	99	67.089	ENSCCAG00000033056	-	86	72.364	Cebus_capucinus
ENSPNYG00000023940	apex1	99	57.595	ENSCCAG00000031931	-	86	61.818	Cebus_capucinus
ENSPNYG00000023940	apex1	99	67.089	ENSCATG00000015580	APEX1	86	71.636	Cercocebus_atys
ENSPNYG00000023940	apex1	99	66.772	ENSCLAG00000001002	APEX1	87	71.739	Chinchilla_lanigera
ENSPNYG00000023940	apex1	99	67.405	ENSCSAG00000016670	-	86	72.000	Chlorocebus_sabaeus
ENSPNYG00000023940	apex1	99	67.405	ENSCSAG00000016685	-	86	72.000	Chlorocebus_sabaeus
ENSPNYG00000023940	apex1	99	71.203	ENSCPBG00000009567	APEX1	86	76.727	Chrysemys_picta_bellii
ENSPNYG00000023940	apex1	99	55.556	ENSCING00000008137	-	85	59.925	Ciona_intestinalis
ENSPNYG00000023940	apex1	96	49.671	ENSCSAVG00000007144	-	100	55.039	Ciona_savignyi
ENSPNYG00000023940	apex1	99	66.772	ENSCANG00000030726	APEX1	86	72.000	Colobus_angolensis_palliatus
ENSPNYG00000023940	apex1	99	65.615	ENSCGRG00001017046	Apex1	87	70.290	Cricetulus_griseus_chok1gshd
ENSPNYG00000023940	apex1	99	65.615	ENSCGRG00000008984	Apex1	87	70.290	Cricetulus_griseus_crigri
ENSPNYG00000023940	apex1	100	89.032	ENSCSEG00000017499	apex1	99	89.032	Cynoglossus_semilaevis
ENSPNYG00000023940	apex1	100	92.258	ENSCVAG00000022075	apex1	100	92.258	Cyprinodon_variegatus
ENSPNYG00000023940	apex1	99	85.761	ENSDARG00000045843	apex1	91	87.619	Danio_rerio
ENSPNYG00000023940	apex1	99	62.975	ENSDNOG00000042234	APEX1	82	67.754	Dasypus_novemcinctus
ENSPNYG00000023940	apex1	99	65.823	ENSDORG00000001616	Apex1	87	70.652	Dipodomys_ordii
ENSPNYG00000023940	apex1	99	66.772	ENSETEG00000004855	-	86	71.636	Echinops_telfairi
ENSPNYG00000023940	apex1	76	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSPNYG00000023940	apex1	99	66.246	ENSEASG00005017489	APEX1	64	71.377	Equus_asinus_asinus
ENSPNYG00000023940	apex1	99	66.246	ENSECAG00000022325	APEX1	71	71.377	Equus_caballus
ENSPNYG00000023940	apex1	86	70.632	ENSEEUG00000012569	APEX1	92	70.677	Erinaceus_europaeus
ENSPNYG00000023940	apex1	99	82.581	ENSELUG00000021706	apex1	88	88.000	Esox_lucius
ENSPNYG00000023940	apex1	99	66.772	ENSFCAG00000030869	APEX1	87	71.739	Felis_catus
ENSPNYG00000023940	apex1	99	67.089	ENSFDAG00000006120	APEX1	87	72.101	Fukomys_damarensis
ENSPNYG00000023940	apex1	100	91.613	ENSFHEG00000009031	apex1	83	91.613	Fundulus_heteroclitus
ENSPNYG00000023940	apex1	100	77.814	ENSGMOG00000007943	apex1	88	80.000	Gadus_morhua
ENSPNYG00000023940	apex1	100	91.935	ENSGAFG00000005311	apex1	100	91.935	Gambusia_affinis
ENSPNYG00000023940	apex1	100	89.677	ENSGACG00000019497	apex1	99	91.353	Gasterosteus_aculeatus
ENSPNYG00000023940	apex1	99	71.203	ENSGAGG00000014999	APEX1	86	76.727	Gopherus_agassizii
ENSPNYG00000023940	apex1	99	65.723	ENSGGOG00000002128	APEX1	86	71.636	Gorilla_gorilla
ENSPNYG00000023940	apex1	100	99.355	ENSHBUG00000005894	apex1	100	99.355	Haplochromis_burtoni
ENSPNYG00000023940	apex1	99	66.772	ENSHGLG00000002848	APEX1	87	72.101	Heterocephalus_glaber_female
ENSPNYG00000023940	apex1	99	66.772	ENSHGLG00100017878	APEX1	87	72.101	Heterocephalus_glaber_male
ENSPNYG00000023940	apex1	100	87.781	ENSHCOG00000009961	apex1	88	90.182	Hippocampus_comes
ENSPNYG00000023940	apex1	99	85.161	ENSIPUG00000005799	apex1	88	88.364	Ictalurus_punctatus
ENSPNYG00000023940	apex1	99	67.089	ENSSTOG00000010096	APEX1	87	72.101	Ictidomys_tridecemlineatus
ENSPNYG00000023940	apex1	99	65.506	ENSJJAG00000012067	-	87	70.290	Jaculus_jaculus
ENSPNYG00000023940	apex1	99	59.177	ENSJJAG00000003660	-	87	62.319	Jaculus_jaculus
ENSPNYG00000023940	apex1	90	62.007	ENSJJAG00000020465	-	89	61.957	Jaculus_jaculus
ENSPNYG00000023940	apex1	100	91.613	ENSKMAG00000021171	apex1	100	91.613	Kryptolebias_marmoratus
ENSPNYG00000023940	apex1	100	89.355	ENSLBEG00000010248	apex1	100	89.355	Labrus_bergylta
ENSPNYG00000023940	apex1	99	73.077	ENSLACG00000008617	APEX1	87	78.832	Latimeria_chalumnae
ENSPNYG00000023940	apex1	99	78.914	ENSLOCG00000015516	apex1	87	82.909	Lepisosteus_oculatus
ENSPNYG00000023940	apex1	99	66.772	ENSLAFG00000021872	APEX1	86	72.000	Loxodonta_africana
ENSPNYG00000023940	apex1	99	66.456	ENSMFAG00000002565	APEX1	86	71.636	Macaca_fascicularis
ENSPNYG00000023940	apex1	99	66.456	ENSMMUG00000048039	APEX1	86	71.636	Macaca_mulatta
ENSPNYG00000023940	apex1	99	66.562	ENSMNEG00000036944	APEX1	86	71.636	Macaca_nemestrina
ENSPNYG00000023940	apex1	99	67.089	ENSMLEG00000042125	APEX1	86	71.636	Mandrillus_leucophaeus
ENSPNYG00000023940	apex1	100	91.613	ENSMAMG00000023526	apex1	100	91.613	Mastacembelus_armatus
ENSPNYG00000023940	apex1	100	99.677	ENSMZEG00005014187	apex1	100	99.677	Maylandia_zebra
ENSPNYG00000023940	apex1	99	65.823	ENSMAUG00000013994	Apex1	87	69.928	Mesocricetus_auratus
ENSPNYG00000023940	apex1	99	65.300	ENSMICG00000043554	APEX1	87	70.290	Microcebus_murinus
ENSPNYG00000023940	apex1	99	66.667	ENSMOCG00000013721	Apex1	87	71.377	Microtus_ochrogaster
ENSPNYG00000023940	apex1	100	88.103	ENSMMOG00000010031	apex1	86	90.580	Mola_mola
ENSPNYG00000023940	apex1	91	68.551	ENSMODG00000007125	APEX1	86	69.818	Monodelphis_domestica
ENSPNYG00000023940	apex1	90	84.643	ENSMALG00000011699	apex1	74	84.364	Monopterus_albus
ENSPNYG00000023940	apex1	99	67.516	MGP_CAROLIEiJ_G0019209	Apex1	87	72.000	Mus_caroli
ENSPNYG00000023940	apex1	99	67.302	ENSMUSG00000035960	Apex1	87	71.739	Mus_musculus
ENSPNYG00000023940	apex1	99	67.619	MGP_PahariEiJ_G0030232	Apex1	87	72.000	Mus_pahari
ENSPNYG00000023940	apex1	99	67.302	MGP_SPRETEiJ_G0020101	Apex1	87	71.739	Mus_spretus
ENSPNYG00000023940	apex1	99	64.780	ENSMLUG00000028957	APEX1	86	70.652	Myotis_lucifugus
ENSPNYG00000023940	apex1	87	53.791	ENSNGAG00000021748	-	71	57.806	Nannospalax_galili
ENSPNYG00000023940	apex1	99	65.823	ENSNGAG00000002725	-	87	71.377	Nannospalax_galili
ENSPNYG00000023940	apex1	100	99.677	ENSNBRG00000005334	apex1	91	99.677	Neolamprologus_brichardi
ENSPNYG00000023940	apex1	99	65.723	ENSNLEG00000010839	APEX1	88	71.636	Nomascus_leucogenys
ENSPNYG00000023940	apex1	99	65.815	ENSMEUG00000014519	APEX1	87	69.708	Notamacropus_eugenii
ENSPNYG00000023940	apex1	99	66.139	ENSOPRG00000014029	APEX1	87	69.928	Ochotona_princeps
ENSPNYG00000023940	apex1	99	66.772	ENSODEG00000001703	-	87	71.739	Octodon_degus
ENSPNYG00000023940	apex1	99	52.174	ENSODEG00000006583	-	86	55.319	Octodon_degus
ENSPNYG00000023940	apex1	95	52.881	ENSODEG00000004777	-	83	58.730	Octodon_degus
ENSPNYG00000023940	apex1	100	99.677	ENSONIG00000012089	apex1	100	99.677	Oreochromis_niloticus
ENSPNYG00000023940	apex1	88	70.182	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSPNYG00000023940	apex1	99	66.772	ENSOCUG00000005022	APEX1	87	71.377	Oryctolagus_cuniculus
ENSPNYG00000023940	apex1	100	90.032	ENSORLG00000012378	apex1	88	92.364	Oryzias_latipes
ENSPNYG00000023940	apex1	100	90.032	ENSORLG00020021371	apex1	88	92.364	Oryzias_latipes_hni
ENSPNYG00000023940	apex1	100	90.032	ENSORLG00015020089	apex1	88	92.364	Oryzias_latipes_hsok
ENSPNYG00000023940	apex1	100	90.997	ENSOMEG00000018876	apex1	88	93.091	Oryzias_melastigma
ENSPNYG00000023940	apex1	99	66.456	ENSOGAG00000013335	-	87	71.377	Otolemur_garnettii
ENSPNYG00000023940	apex1	90	63.082	ENSOGAG00000029355	-	87	63.043	Otolemur_garnettii
ENSPNYG00000023940	apex1	96	63.072	ENSOARG00000001876	-	86	67.293	Ovis_aries
ENSPNYG00000023940	apex1	99	66.139	ENSOARG00000019740	-	87	70.652	Ovis_aries
ENSPNYG00000023940	apex1	96	55.960	ENSOARG00000014424	-	88	58.696	Ovis_aries
ENSPNYG00000023940	apex1	99	66.038	ENSPPAG00000038760	APEX1	88	72.000	Pan_paniscus
ENSPNYG00000023940	apex1	99	66.772	ENSPPRG00000011794	APEX1	87	71.739	Panthera_pardus
ENSPNYG00000023940	apex1	99	66.772	ENSPTIG00000014829	APEX1	87	71.739	Panthera_tigris_altaica
ENSPNYG00000023940	apex1	99	66.038	ENSPTRG00000006093	APEX1	88	72.000	Pan_troglodytes
ENSPNYG00000023940	apex1	99	67.089	ENSPANG00000022757	APEX1	86	71.636	Papio_anubis
ENSPNYG00000023940	apex1	89	87.681	ENSPKIG00000003504	apex1	88	87.636	Paramormyrops_kingsleyae
ENSPNYG00000023940	apex1	88	78.022	ENSPMGG00000016596	apex1	80	78.022	Periophthalmus_magnuspinnatus
ENSPNYG00000023940	apex1	99	66.246	ENSPEMG00000019097	Apex1	87	70.652	Peromyscus_maniculatus_bairdii
ENSPNYG00000023940	apex1	92	72.822	ENSPMAG00000007275	-	93	74.182	Petromyzon_marinus
ENSPNYG00000023940	apex1	90	68.817	ENSPCIG00000023274	APEX1	86	69.708	Phascolarctos_cinereus
ENSPNYG00000023940	apex1	100	91.290	ENSPFOG00000004178	apex1	100	91.290	Poecilia_formosa
ENSPNYG00000023940	apex1	100	91.613	ENSPLAG00000012779	apex1	100	91.613	Poecilia_latipinna
ENSPNYG00000023940	apex1	100	91.290	ENSPMEG00000019623	apex1	100	91.290	Poecilia_mexicana
ENSPNYG00000023940	apex1	100	90.000	ENSPREG00000014298	apex1	99	90.000	Poecilia_reticulata
ENSPNYG00000023940	apex1	99	65.723	ENSPPYG00000005565	APEX1	86	71.636	Pongo_abelii
ENSPNYG00000023940	apex1	99	65.300	ENSPCAG00000010376	APEX1	86	70.182	Procavia_capensis
ENSPNYG00000023940	apex1	99	65.615	ENSPCOG00000021564	APEX1	87	70.652	Propithecus_coquereli
ENSPNYG00000023940	apex1	99	65.723	ENSPVAG00000010736	APEX1	86	71.273	Pteropus_vampyrus
ENSPNYG00000023940	apex1	92	86.364	ENSPNAG00000020897	apex1	84	91.235	Pygocentrus_nattereri
ENSPNYG00000023940	apex1	99	66.667	ENSRNOG00000009663	Apex1	87	71.377	Rattus_norvegicus
ENSPNYG00000023940	apex1	99	67.405	ENSRBIG00000038325	APEX1	85	72.000	Rhinopithecus_bieti
ENSPNYG00000023940	apex1	99	60.000	ENSSBOG00000031372	-	89	63.273	Saimiri_boliviensis_boliviensis
ENSPNYG00000023940	apex1	99	67.089	ENSSBOG00000018921	-	86	72.364	Saimiri_boliviensis_boliviensis
ENSPNYG00000023940	apex1	100	63.057	ENSSHAG00000013524	APEX1	85	68.953	Sarcophilus_harrisii
ENSPNYG00000023940	apex1	99	83.172	ENSSFOG00015001948	apex1	89	86.909	Scleropages_formosus
ENSPNYG00000023940	apex1	100	87.619	ENSSMAG00000013348	apex1	87	90.909	Scophthalmus_maximus
ENSPNYG00000023940	apex1	100	90.645	ENSSDUG00000016377	apex1	99	90.645	Seriola_dumerili
ENSPNYG00000023940	apex1	100	90.323	ENSSLDG00000023005	apex1	100	90.323	Seriola_lalandi_dorsalis
ENSPNYG00000023940	apex1	90	73.214	ENSSPUG00000000531	APEX1	93	73.723	Sphenodon_punctatus
ENSPNYG00000023940	apex1	100	89.355	ENSSPAG00000000458	apex1	100	89.355	Stegastes_partitus
ENSPNYG00000023940	apex1	99	66.981	ENSSSCG00000040060	-	87	71.377	Sus_scrofa
ENSPNYG00000023940	apex1	95	40.264	ENSSSCG00000039705	-	89	42.238	Sus_scrofa
ENSPNYG00000023940	apex1	76	59.149	ENSTGUG00000014378	APEX1	100	59.149	Taeniopygia_guttata
ENSPNYG00000023940	apex1	100	85.623	ENSTRUG00000004268	apex1	83	89.455	Takifugu_rubripes
ENSPNYG00000023940	apex1	100	85.484	ENSTNIG00000005778	apex1	89	88.727	Tetraodon_nigroviridis
ENSPNYG00000023940	apex1	99	63.608	ENSTBEG00000006405	APEX1	86	68.364	Tupaia_belangeri
ENSPNYG00000023940	apex1	76	70.213	ENSTTRG00000007860	APEX1	100	70.213	Tursiops_truncatus
ENSPNYG00000023940	apex1	99	66.139	ENSUAMG00000010457	APEX1	87	70.652	Ursus_americanus
ENSPNYG00000023940	apex1	99	66.139	ENSUMAG00000009178	APEX1	87	70.652	Ursus_maritimus
ENSPNYG00000023940	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSPNYG00000023940	apex1	99	66.139	ENSVVUG00000009010	APEX1	86	71.273	Vulpes_vulpes
ENSPNYG00000023940	apex1	99	70.701	ENSXETG00000024773	apex1	87	74.909	Xenopus_tropicalis
ENSPNYG00000023940	apex1	100	91.290	ENSXCOG00000015233	apex1	99	91.290	Xiphophorus_couchianus
ENSPNYG00000023940	apex1	100	91.290	ENSXMAG00000006195	apex1	100	91.290	Xiphophorus_maculatus