EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000023995 (Gene tree)
Gene ID: 102205134
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 15126 bases
Position: chrJH419554.1:306331-321456
Accession: 102205134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031811	ResIII	PF04851.15	1.5e-08	1	1
ENSPNYP00000031811	BRK	PF07533.16	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032573	-	4503	XM_005752224	ENSPNYP00000031811	1500 (aa)	XP_005752281	-

Gene Model

Click here to download ENSPNYG00000023995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000023995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000023995	-	98	70.968	ENSPNYG00000004533	SMARCA2	91	70.977
ENSPNYG00000023995	-	98	87.357	ENSPNYG00000000717	smarca4a	96	84.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000023995	-	97	82.080	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSPNYG00000023995	-	92	97.258	ENSAPOG00000004542	SMARCA4	99	97.258	Acanthochromis_polyacanthus
ENSPNYG00000023995	-	78	88.627	ENSAPOG00000003509	smarca4a	93	87.848	Acanthochromis_polyacanthus
ENSPNYG00000023995	-	97	86.225	ENSAMEG00000010868	SMARCA4	96	78.688	Ailuropoda_melanoleuca
ENSPNYG00000023995	-	100	98.733	ENSACIG00000003035	-	99	98.733	Amphilophus_citrinellus
ENSPNYG00000023995	-	98	84.764	ENSACIG00000021550	smarca4a	94	84.571	Amphilophus_citrinellus
ENSPNYG00000023995	-	92	86.904	ENSAOCG00000019167	smarca4a	100	86.629	Amphiprion_ocellaris
ENSPNYG00000023995	-	96	94.607	ENSAOCG00000009450	-	97	94.474	Amphiprion_ocellaris
ENSPNYG00000023995	-	92	86.975	ENSAPEG00000015559	smarca4a	100	86.700	Amphiprion_percula
ENSPNYG00000023995	-	99	95.213	ENSAPEG00000023108	-	96	95.213	Amphiprion_percula
ENSPNYG00000023995	-	98	85.010	ENSATEG00000011524	smarca4a	95	84.194	Anabas_testudineus
ENSPNYG00000023995	-	98	94.142	ENSATEG00000001094	-	97	93.677	Anabas_testudineus
ENSPNYG00000023995	-	97	86.439	ENSANAG00000036991	SMARCA4	95	79.897	Aotus_nancymaae
ENSPNYG00000023995	-	98	86.071	ENSACLG00000000163	smarca4a	96	84.720	Astatotilapia_calliptera
ENSPNYG00000023995	-	100	97.820	ENSACLG00000008638	-	100	97.820	Astatotilapia_calliptera
ENSPNYG00000023995	-	96	87.245	ENSAMXG00000011238	-	96	90.330	Astyanax_mexicanus
ENSPNYG00000023995	-	98	86.734	ENSAMXG00000021023	smarca4a	96	86.186	Astyanax_mexicanus
ENSPNYG00000023995	-	77	89.717	ENSCJAG00000005936	SMARCA4	95	78.701	Callithrix_jacchus
ENSPNYG00000023995	-	98	84.471	ENSCAFG00020024620	SMARCA4	96	83.344	Canis_lupus_dingo
ENSPNYG00000023995	-	98	84.781	ENSTSYG00000012966	SMARCA4	90	90.851	Carlito_syrichta
ENSPNYG00000023995	-	96	83.528	ENSCAPG00000015932	SMARCA4	99	82.671	Cavia_aperea
ENSPNYG00000023995	-	98	82.317	ENSCCAG00000031660	SMARCA4	93	80.078	Cebus_capucinus
ENSPNYG00000023995	-	97	86.416	ENSCATG00000029530	SMARCA4	95	82.487	Cercocebus_atys
ENSPNYG00000023995	-	98	85.424	ENSCLAG00000011946	SMARCA4	95	85.217	Chinchilla_lanigera
ENSPNYG00000023995	-	97	87.529	ENSCANG00000036013	SMARCA4	95	82.487	Colobus_angolensis_palliatus
ENSPNYG00000023995	-	97	88.086	ENSCGRG00000017242	Smarca4	95	88.517	Cricetulus_griseus_crigri
ENSPNYG00000023995	-	94	83.501	ENSCSEG00000014771	smarca4a	95	83.043	Cynoglossus_semilaevis
ENSPNYG00000023995	-	98	84.217	ENSCVAG00000006979	smarca4a	95	83.635	Cyprinodon_variegatus
ENSPNYG00000023995	-	96	92.876	ENSCVAG00000003018	-	96	90.812	Cyprinodon_variegatus
ENSPNYG00000023995	-	98	85.126	ENSDARG00000077226	smarca4a	95	85.052	Danio_rerio
ENSPNYG00000023995	-	97	84.176	ENSDARG00000104339	SMARCA4	96	83.865	Danio_rerio
ENSPNYG00000023995	-	96	83.798	ENSDNOG00000048847	SMARCA4	90	90.368	Dasypus_novemcinctus
ENSPNYG00000023995	-	95	76.307	ENSETEG00000013361	SMARCA4	94	72.021	Echinops_telfairi
ENSPNYG00000023995	-	98	85.034	ENSEASG00005006167	SMARCA4	94	84.398	Equus_asinus_asinus
ENSPNYG00000023995	-	98	86.667	ENSELUG00000010247	smarca4a	94	85.428	Esox_lucius
ENSPNYG00000023995	-	98	84.626	ENSELUG00000023232	-	90	84.303	Esox_lucius
ENSPNYG00000023995	-	79	90.795	ENSFALG00000004208	SMARCA4	95	81.812	Ficedula_albicollis
ENSPNYG00000023995	-	99	89.627	ENSFHEG00000007902	-	94	88.092	Fundulus_heteroclitus
ENSPNYG00000023995	-	98	82.992	ENSFHEG00000010182	smarca4a	98	83.860	Fundulus_heteroclitus
ENSPNYG00000023995	-	86	83.401	ENSGMOG00000002649	smarca4a	82	85.490	Gadus_morhua
ENSPNYG00000023995	-	84	86.089	ENSGMOG00000005756	-	80	85.662	Gadus_morhua
ENSPNYG00000023995	-	87	88.253	ENSGAFG00000014900	smarca4a	94	85.415	Gambusia_affinis
ENSPNYG00000023995	-	98	89.946	ENSGAFG00000008827	-	94	90.547	Gambusia_affinis
ENSPNYG00000023995	-	98	85.849	ENSGACG00000016033	-	96	85.019	Gasterosteus_aculeatus
ENSPNYG00000023995	-	94	83.300	ENSGACG00000006691	smarca4a	95	81.947	Gasterosteus_aculeatus
ENSPNYG00000023995	-	97	88.144	ENSGGOG00000009882	SMARCA4	95	82.662	Gorilla_gorilla
ENSPNYG00000023995	-	100	98.745	ENSHBUG00000005447	-	100	98.745	Haplochromis_burtoni
ENSPNYG00000023995	-	98	86.137	ENSHBUG00000021172	smarca4a	95	85.032	Haplochromis_burtoni
ENSPNYG00000023995	-	98	84.146	ENSHGLG00100013774	SMARCA4	95	82.120	Heterocephalus_glaber_male
ENSPNYG00000023995	-	99	84.294	ENSHCOG00000009510	smarca4a	96	83.946	Hippocampus_comes
ENSPNYG00000023995	-	98	85.733	ENSIPUG00000006107	smarca4a	97	85.389	Ictalurus_punctatus
ENSPNYG00000023995	-	95	87.425	ENSIPUG00000016346	-	92	85.957	Ictalurus_punctatus
ENSPNYG00000023995	-	98	85.970	ENSKMAG00000011931	smarca4a	95	86.406	Kryptolebias_marmoratus
ENSPNYG00000023995	-	99	92.746	ENSKMAG00000019518	-	98	90.693	Kryptolebias_marmoratus
ENSPNYG00000023995	-	96	84.077	ENSLBEG00000020655	-	94	84.008	Labrus_bergylta
ENSPNYG00000023995	-	100	83.248	ENSLBEG00000017383	smarca4a	97	82.731	Labrus_bergylta
ENSPNYG00000023995	-	51	77.536	ENSLACG00000015309	SMARCA4	100	73.945	Latimeria_chalumnae
ENSPNYG00000023995	-	98	83.681	ENSLOCG00000007820	smarca4a	72	92.784	Lepisosteus_oculatus
ENSPNYG00000023995	-	99	84.870	ENSLAFG00000001433	SMARCA4	95	82.456	Loxodonta_africana
ENSPNYG00000023995	-	97	87.461	ENSMFAG00000032146	SMARCA4	94	82.487	Macaca_fascicularis
ENSPNYG00000023995	-	97	81.521	ENSMMUG00000012042	SMARCA4	90	91.741	Macaca_mulatta
ENSPNYG00000023995	-	97	86.416	ENSMNEG00000028512	SMARCA4	95	80.403	Macaca_nemestrina
ENSPNYG00000023995	-	97	86.416	ENSMLEG00000034976	SMARCA4	95	82.976	Mandrillus_leucophaeus
ENSPNYG00000023995	-	99	94.668	ENSMAMG00000002841	-	99	94.538	Mastacembelus_armatus
ENSPNYG00000023995	-	98	85.809	ENSMAMG00000009256	smarca4a	94	85.790	Mastacembelus_armatus
ENSPNYG00000023995	-	100	92.542	ENSMZEG00005023861	-	100	92.480	Maylandia_zebra
ENSPNYG00000023995	-	98	86.137	ENSMZEG00005003889	smarca4a	94	85.883	Maylandia_zebra
ENSPNYG00000023995	-	97	85.725	ENSMICG00000009806	SMARCA4	95	82.456	Microcebus_murinus
ENSPNYG00000023995	-	99	82.554	ENSMMOG00000007571	smarca4a	98	80.135	Mola_mola
ENSPNYG00000023995	-	99	93.262	ENSMMOG00000008466	-	96	93.262	Mola_mola
ENSPNYG00000023995	-	92	94.317	ENSMALG00000021534	-	99	94.092	Monopterus_albus
ENSPNYG00000023995	-	94	85.384	ENSMALG00000003388	smarca4a	94	85.079	Monopterus_albus
ENSPNYG00000023995	-	79	83.228	MGP_CAROLIEiJ_G0031879	Smarca4	98	81.983	Mus_caroli
ENSPNYG00000023995	-	79	83.228	ENSMUSG00000032187	Smarca4	98	81.983	Mus_musculus
ENSPNYG00000023995	-	79	83.228	MGP_SPRETEiJ_G0033003	Smarca4	98	81.983	Mus_spretus
ENSPNYG00000023995	-	98	86.832	ENSNBRG00000011457	smarca4a	96	86.965	Neolamprologus_brichardi
ENSPNYG00000023995	-	92	98.632	ENSNBRG00000018865	-	99	98.632	Neolamprologus_brichardi
ENSPNYG00000023995	-	97	86.043	ENSNLEG00000012389	SMARCA4	95	79.897	Nomascus_leucogenys
ENSPNYG00000023995	-	81	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSPNYG00000023995	-	98	85.677	ENSODEG00000017127	SMARCA4	95	84.878	Octodon_degus
ENSPNYG00000023995	-	99	92.192	ENSONIG00000018040	-	95	91.302	Oreochromis_niloticus
ENSPNYG00000023995	-	98	86.248	ENSONIG00000008196	smarca4a	95	85.462	Oreochromis_niloticus
ENSPNYG00000023995	-	98	80.000	ENSOCUG00000001787	SMARCA4	95	79.724	Oryctolagus_cuniculus
ENSPNYG00000023995	-	95	93.506	ENSORLG00000003955	-	98	91.517	Oryzias_latipes
ENSPNYG00000023995	-	94	84.264	ENSORLG00000015452	smarca4a	76	91.707	Oryzias_latipes
ENSPNYG00000023995	-	95	93.446	ENSORLG00020009728	-	98	91.020	Oryzias_latipes_hni
ENSPNYG00000023995	-	94	84.331	ENSORLG00020004611	smarca4a	99	85.387	Oryzias_latipes_hni
ENSPNYG00000023995	-	98	86.755	ENSORLG00015007739	-	98	88.195	Oryzias_latipes_hsok
ENSPNYG00000023995	-	94	84.331	ENSORLG00015016560	smarca4a	98	82.324	Oryzias_latipes_hsok
ENSPNYG00000023995	-	95	93.741	ENSOMEG00000016626	-	95	86.637	Oryzias_melastigma
ENSPNYG00000023995	-	98	84.555	ENSOMEG00000007486	smarca4a	95	84.176	Oryzias_melastigma
ENSPNYG00000023995	-	91	84.495	ENSOGAG00000016148	SMARCA4	95	89.072	Otolemur_garnettii
ENSPNYG00000023995	-	97	85.453	ENSPPAG00000043191	SMARCA4	95	82.487	Pan_paniscus
ENSPNYG00000023995	-	81	87.019	ENSPTIG00000017447	SMARCA4	95	79.073	Panthera_tigris_altaica
ENSPNYG00000023995	-	97	85.453	ENSPTRG00000010488	SMARCA4	95	82.487	Pan_troglodytes
ENSPNYG00000023995	-	97	86.416	ENSPANG00000011042	SMARCA4	95	82.115	Papio_anubis
ENSPNYG00000023995	-	94	86.094	ENSPKIG00000010087	-	92	85.250	Paramormyrops_kingsleyae
ENSPNYG00000023995	-	98	86.823	ENSPKIG00000007770	SMARCA4	95	85.235	Paramormyrops_kingsleyae
ENSPNYG00000023995	-	83	87.305	ENSPSIG00000005547	SMARCA4	95	80.687	Pelodiscus_sinensis
ENSPNYG00000023995	-	84	90.348	ENSPFOG00000007892	smarca4a	95	81.118	Poecilia_formosa
ENSPNYG00000023995	-	99	89.448	ENSPFOG00000012930	-	95	86.435	Poecilia_formosa
ENSPNYG00000023995	-	98	86.744	ENSPLAG00000014294	smarca4a	95	86.043	Poecilia_latipinna
ENSPNYG00000023995	-	99	93.144	ENSPLAG00000018616	-	96	93.079	Poecilia_latipinna
ENSPNYG00000023995	-	98	94.130	ENSPMEG00000008929	-	94	94.265	Poecilia_mexicana
ENSPNYG00000023995	-	84	90.269	ENSPMEG00000003725	smarca4a	95	82.920	Poecilia_mexicana
ENSPNYG00000023995	-	98	82.916	ENSPREG00000014608	smarca4a	95	83.366	Poecilia_reticulata
ENSPNYG00000023995	-	98	92.172	ENSPREG00000014823	-	94	91.831	Poecilia_reticulata
ENSPNYG00000023995	-	76	89.130	ENSPCAG00000014054	SMARCA4	73	88.889	Procavia_capensis
ENSPNYG00000023995	-	97	87.558	ENSPCOG00000023011	SMARCA4	95	82.326	Propithecus_coquereli
ENSPNYG00000023995	-	76	74.224	ENSPVAG00000007787	SMARCA4	90	73.859	Pteropus_vampyrus
ENSPNYG00000023995	-	98	86.982	ENSPNAG00000006636	-	93	86.406	Pygocentrus_nattereri
ENSPNYG00000023995	-	98	86.135	ENSPNAG00000024136	smarca4a	94	85.724	Pygocentrus_nattereri
ENSPNYG00000023995	-	97	87.529	ENSRBIG00000038696	SMARCA4	94	82.487	Rhinopithecus_bieti
ENSPNYG00000023995	-	97	87.529	ENSRROG00000045509	SMARCA4	95	82.487	Rhinopithecus_roxellana
ENSPNYG00000023995	-	97	87.191	ENSSBOG00000026896	SMARCA4	95	82.487	Saimiri_boliviensis_boliviensis
ENSPNYG00000023995	-	97	85.964	ENSSHAG00000001642	SMARCA4	95	82.671	Sarcophilus_harrisii
ENSPNYG00000023995	-	94	84.443	ENSSFOG00015009921	-	86	92.444	Scleropages_formosus
ENSPNYG00000023995	-	98	88.793	ENSSFOG00015013823	smarca4	93	88.837	Scleropages_formosus
ENSPNYG00000023995	-	97	92.639	ENSSMAG00000014082	-	98	87.196	Scophthalmus_maximus
ENSPNYG00000023995	-	98	85.526	ENSSMAG00000003200	smarca4a	93	85.441	Scophthalmus_maximus
ENSPNYG00000023995	-	99	93.614	ENSSDUG00000005388	-	93	93.487	Seriola_dumerili
ENSPNYG00000023995	-	98	82.050	ENSSDUG00000017298	smarca4a	95	81.438	Seriola_dumerili
ENSPNYG00000023995	-	99	93.850	ENSSLDG00000023663	-	99	93.722	Seriola_lalandi_dorsalis
ENSPNYG00000023995	-	98	84.056	ENSSLDG00000024486	smarca4a	100	86.898	Seriola_lalandi_dorsalis
ENSPNYG00000023995	-	62	97.516	ENSSARG00000013477	SMARCA4	77	97.516	Sorex_araneus
ENSPNYG00000023995	-	96	97.117	ENSSPAG00000012533	-	94	97.392	Stegastes_partitus
ENSPNYG00000023995	-	98	86.515	ENSSPAG00000004248	smarca4a	95	86.430	Stegastes_partitus
ENSPNYG00000023995	-	56	84.534	ENSTGUG00000015488	-	98	84.304	Taeniopygia_guttata
ENSPNYG00000023995	-	98	86.607	ENSTRUG00000001378	SMARCA4	98	86.051	Takifugu_rubripes
ENSPNYG00000023995	-	92	82.105	ENSTRUG00000004885	smarca4a	100	82.679	Takifugu_rubripes
ENSPNYG00000023995	-	74	83.688	ENSTNIG00000004859	-	86	90.318	Tetraodon_nigroviridis
ENSPNYG00000023995	-	98	89.403	ENSTNIG00000004536	SMARCA4	95	89.838	Tetraodon_nigroviridis
ENSPNYG00000023995	-	98	83.564	ENSUMAG00000022005	SMARCA4	93	91.150	Ursus_maritimus
ENSPNYG00000023995	-	99	80.429	ENSXETG00000009355	smarca4	99	79.327	Xenopus_tropicalis
ENSPNYG00000023995	-	98	94.038	ENSXCOG00000013494	-	94	93.631	Xiphophorus_couchianus
ENSPNYG00000023995	-	77	90.641	ENSXMAG00000006321	smarca4a	100	84.965	Xiphophorus_maculatus
ENSPNYG00000023995	-	99	95.856	ENSXMAG00000007030	-	96	95.856	Xiphophorus_maculatus