EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000024076 (Gene tree)
Gene ID: 102195852
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3810 bases
Position: chrJH419555.1:410581-414390
Accession: 102195852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000031911	PseudoU_synth_2	PF00849.22	6.7e-27	1	1
ENSPNYP00000031912	PseudoU_synth_2	PF00849.22	2.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000032675	-	828	-	ENSPNYP00000031912	275 (aa)	-	-
ENSPNYT00000032674	-	936	XM_005752280	ENSPNYP00000031911	311 (aa)	XP_005752337	UPI0003AF963A

Gene Model

Click here to download ENSPNYG00000024076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000024076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000024076	rpusd1	98	57.282	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSPNYG00000024076	rpusd1	100	82.315	ENSAPOG00000022221	rpusd1	99	83.601	Acanthochromis_polyacanthus
ENSPNYG00000024076	rpusd1	98	59.661	ENSAMEG00000007461	RPUSD1	98	58.983	Ailuropoda_melanoleuca
ENSPNYG00000024076	rpusd1	100	90.675	ENSACIG00000015863	rpusd1	100	90.675	Amphilophus_citrinellus
ENSPNYG00000024076	rpusd1	100	83.601	ENSAOCG00000021975	rpusd1	97	84.244	Amphiprion_ocellaris
ENSPNYG00000024076	rpusd1	100	83.923	ENSAPEG00000001316	rpusd1	97	84.566	Amphiprion_percula
ENSPNYG00000024076	rpusd1	100	83.601	ENSATEG00000002984	rpusd1	99	84.244	Anabas_testudineus
ENSPNYG00000024076	rpusd1	77	59.259	ENSAPLG00000012316	RPUSD1	98	59.259	Anas_platyrhynchos
ENSPNYG00000024076	rpusd1	98	63.973	ENSACAG00000008953	RPUSD1	99	63.636	Anolis_carolinensis
ENSPNYG00000024076	rpusd1	98	57.655	ENSANAG00000024709	RPUSD1	98	56.721	Aotus_nancymaae
ENSPNYG00000024076	rpusd1	100	99.678	ENSACLG00000013692	rpusd1	100	99.678	Astatotilapia_calliptera
ENSPNYG00000024076	rpusd1	99	70.748	ENSAMXG00000019802	rpusd1	99	69.728	Astyanax_mexicanus
ENSPNYG00000024076	rpusd1	98	60.465	ENSBTAG00000000179	RPUSD1	98	60.133	Bos_taurus
ENSPNYG00000024076	rpusd1	98	57.329	ENSCJAG00000012253	RPUSD1	98	57.468	Callithrix_jacchus
ENSPNYG00000024076	rpusd1	98	59.322	ENSCAFG00000019614	RPUSD1	98	58.644	Canis_familiaris
ENSPNYG00000024076	rpusd1	98	59.322	ENSCAFG00020008891	RPUSD1	98	58.644	Canis_lupus_dingo
ENSPNYG00000024076	rpusd1	98	60.797	ENSCHIG00000012872	RPUSD1	98	60.465	Capra_hircus
ENSPNYG00000024076	rpusd1	98	57.627	ENSTSYG00000036934	RPUSD1	98	57.288	Carlito_syrichta
ENSPNYG00000024076	rpusd1	98	57.860	ENSCAPG00000014219	RPUSD1	83	65.217	Cavia_aperea
ENSPNYG00000024076	rpusd1	98	57.860	ENSCPOG00000034604	RPUSD1	83	65.217	Cavia_porcellus
ENSPNYG00000024076	rpusd1	98	57.329	ENSCCAG00000034385	RPUSD1	98	56.393	Cebus_capucinus
ENSPNYG00000024076	rpusd1	98	57.929	ENSCATG00000042983	RPUSD1	98	58.252	Cercocebus_atys
ENSPNYG00000024076	rpusd1	98	57.860	ENSCLAG00000013966	RPUSD1	83	65.613	Chinchilla_lanigera
ENSPNYG00000024076	rpusd1	91	64.683	ENSCSAG00000012121	RPUSD1	98	57.929	Chlorocebus_sabaeus
ENSPNYG00000024076	rpusd1	98	62.092	ENSCPBG00000021101	RPUSD1	99	62.092	Chrysemys_picta_bellii
ENSPNYG00000024076	rpusd1	91	64.683	ENSCANG00000028576	RPUSD1	90	65.217	Colobus_angolensis_palliatus
ENSPNYG00000024076	rpusd1	98	58.249	ENSCGRG00001014253	Rpusd1	98	58.249	Cricetulus_griseus_chok1gshd
ENSPNYG00000024076	rpusd1	98	58.249	ENSCGRG00000017995	Rpusd1	98	58.249	Cricetulus_griseus_crigri
ENSPNYG00000024076	rpusd1	98	81.311	ENSCSEG00000018512	rpusd1	98	81.311	Cynoglossus_semilaevis
ENSPNYG00000024076	rpusd1	100	80.064	ENSCVAG00000022746	rpusd1	100	80.064	Cyprinodon_variegatus
ENSPNYG00000024076	rpusd1	98	72.414	ENSDARG00000060192	rpusd1	99	71.724	Danio_rerio
ENSPNYG00000024076	rpusd1	98	57.003	ENSDNOG00000003721	RPUSD1	98	57.143	Dasypus_novemcinctus
ENSPNYG00000024076	rpusd1	98	58.446	ENSDORG00000026656	Rpusd1	98	59.283	Dipodomys_ordii
ENSPNYG00000024076	rpusd1	96	47.855	ENSEBUG00000008767	rpusd1	79	52.490	Eptatretus_burgeri
ENSPNYG00000024076	rpusd1	99	58.521	ENSEASG00005018421	RPUSD1	61	66.667	Equus_asinus_asinus
ENSPNYG00000024076	rpusd1	100	70.096	ENSELUG00000014307	rpusd1	90	71.383	Esox_lucius
ENSPNYG00000024076	rpusd1	98	59.322	ENSFCAG00000010359	RPUSD1	98	58.983	Felis_catus
ENSPNYG00000024076	rpusd1	98	63.072	ENSFALG00000003211	RPUSD1	99	61.981	Ficedula_albicollis
ENSPNYG00000024076	rpusd1	98	57.655	ENSFDAG00000013398	RPUSD1	98	57.191	Fukomys_damarensis
ENSPNYG00000024076	rpusd1	100	79.421	ENSFHEG00000004736	rpusd1	100	79.743	Fundulus_heteroclitus
ENSPNYG00000024076	rpusd1	99	73.482	ENSGMOG00000010756	rpusd1	99	73.482	Gadus_morhua
ENSPNYG00000024076	rpusd1	98	63.000	ENSGALG00000005315	RPUSD1	99	62.745	Gallus_gallus
ENSPNYG00000024076	rpusd1	100	78.457	ENSGAFG00000009886	rpusd1	100	78.457	Gambusia_affinis
ENSPNYG00000024076	rpusd1	100	81.029	ENSGACG00000014276	rpusd1	100	83.923	Gasterosteus_aculeatus
ENSPNYG00000024076	rpusd1	98	61.667	ENSGAGG00000004181	RPUSD1	99	61.438	Gopherus_agassizii
ENSPNYG00000024076	rpusd1	98	58.065	ENSGGOG00000013997	RPUSD1	98	58.387	Gorilla_gorilla
ENSPNYG00000024076	rpusd1	100	100.000	ENSHBUG00000023728	rpusd1	100	100.000	Haplochromis_burtoni
ENSPNYG00000024076	rpusd1	98	57.191	ENSHGLG00000002595	RPUSD1	98	56.856	Heterocephalus_glaber_female
ENSPNYG00000024076	rpusd1	98	57.191	ENSHGLG00100014303	RPUSD1	98	56.856	Heterocephalus_glaber_male
ENSPNYG00000024076	rpusd1	99	78.799	ENSHCOG00000002390	rpusd1	99	78.799	Hippocampus_comes
ENSPNYG00000024076	rpusd1	98	67.869	ENSIPUG00000001570	rpusd1	99	68.627	Ictalurus_punctatus
ENSPNYG00000024076	rpusd1	98	58.194	ENSSTOG00000004276	RPUSD1	98	57.860	Ictidomys_tridecemlineatus
ENSPNYG00000024076	rpusd1	98	58.632	ENSJJAG00000015696	Rpusd1	98	58.586	Jaculus_jaculus
ENSPNYG00000024076	rpusd1	100	78.526	ENSKMAG00000017287	rpusd1	100	78.526	Kryptolebias_marmoratus
ENSPNYG00000024076	rpusd1	100	78.135	ENSLBEG00000022502	rpusd1	99	80.386	Labrus_bergylta
ENSPNYG00000024076	rpusd1	100	78.135	ENSLBEG00000013354	RPUSD1	99	80.386	Labrus_bergylta
ENSPNYG00000024076	rpusd1	98	62.092	ENSLACG00000008869	RPUSD1	99	62.416	Latimeria_chalumnae
ENSPNYG00000024076	rpusd1	79	80.093	ENSLOCG00000005682	rpusd1	99	80.093	Lepisosteus_oculatus
ENSPNYG00000024076	rpusd1	98	57.288	ENSLAFG00000002115	RPUSD1	98	56.610	Loxodonta_africana
ENSPNYG00000024076	rpusd1	98	57.929	ENSMFAG00000003961	RPUSD1	98	58.252	Macaca_fascicularis
ENSPNYG00000024076	rpusd1	98	57.929	ENSMMUG00000000842	RPUSD1	98	58.252	Macaca_mulatta
ENSPNYG00000024076	rpusd1	98	57.929	ENSMNEG00000042712	RPUSD1	98	58.252	Macaca_nemestrina
ENSPNYG00000024076	rpusd1	98	57.929	ENSMLEG00000030591	RPUSD1	98	58.252	Mandrillus_leucophaeus
ENSPNYG00000024076	rpusd1	100	84.566	ENSMAMG00000004735	rpusd1	99	84.887	Mastacembelus_armatus
ENSPNYG00000024076	rpusd1	100	99.678	ENSMZEG00005003214	rpusd1	100	99.678	Maylandia_zebra
ENSPNYG00000024076	rpusd1	97	63.851	ENSMGAG00000005447	RPUSD1	99	63.176	Meleagris_gallopavo
ENSPNYG00000024076	rpusd1	93	54.651	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSPNYG00000024076	rpusd1	98	57.333	ENSMICG00000017561	RPUSD1	98	57.000	Microcebus_murinus
ENSPNYG00000024076	rpusd1	98	57.860	ENSMOCG00000014082	Rpusd1	98	58.306	Microtus_ochrogaster
ENSPNYG00000024076	rpusd1	99	83.088	ENSMMOG00000012569	rpusd1	99	83.824	Mola_mola
ENSPNYG00000024076	rpusd1	99	60.841	ENSMODG00000016882	RPUSD1	99	60.726	Monodelphis_domestica
ENSPNYG00000024076	rpusd1	100	82.958	ENSMALG00000017818	rpusd1	99	84.566	Monopterus_albus
ENSPNYG00000024076	rpusd1	98	57.525	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.306	Mus_caroli
ENSPNYG00000024076	rpusd1	98	57.860	ENSMUSG00000041199	Rpusd1	98	58.306	Mus_musculus
ENSPNYG00000024076	rpusd1	98	58.140	MGP_PahariEiJ_G0023562	Rpusd1	98	58.140	Mus_pahari
ENSPNYG00000024076	rpusd1	98	57.860	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.306	Mus_spretus
ENSPNYG00000024076	rpusd1	96	59.655	ENSMPUG00000015897	RPUSD1	96	58.966	Mustela_putorius_furo
ENSPNYG00000024076	rpusd1	98	58.632	ENSMLUG00000001089	RPUSD1	84	64.122	Myotis_lucifugus
ENSPNYG00000024076	rpusd1	98	57.860	ENSNGAG00000003595	Rpusd1	83	64.822	Nannospalax_galili
ENSPNYG00000024076	rpusd1	100	95.498	ENSNBRG00000006457	rpusd1	100	95.498	Neolamprologus_brichardi
ENSPNYG00000024076	rpusd1	54	49.708	ENSNLEG00000008424	-	97	50.289	Nomascus_leucogenys
ENSPNYG00000024076	rpusd1	98	64.746	ENSMEUG00000016049	RPUSD1	98	63.946	Notamacropus_eugenii
ENSPNYG00000024076	rpusd1	98	52.740	ENSOPRG00000008340	RPUSD1	98	52.055	Ochotona_princeps
ENSPNYG00000024076	rpusd1	98	57.655	ENSODEG00000016945	RPUSD1	83	65.217	Octodon_degus
ENSPNYG00000024076	rpusd1	99	98.052	ENSONIG00000015672	rpusd1	100	98.052	Oreochromis_niloticus
ENSPNYG00000024076	rpusd1	100	78.457	ENSORLG00000013009	rpusd1	99	77.492	Oryzias_latipes
ENSPNYG00000024076	rpusd1	100	77.492	ENSORLG00020010382	rpusd1	99	77.492	Oryzias_latipes_hni
ENSPNYG00000024076	rpusd1	100	77.492	ENSORLG00015021354	rpusd1	99	76.527	Oryzias_latipes_hsok
ENSPNYG00000024076	rpusd1	100	76.412	ENSOMEG00000021426	rpusd1	99	76.744	Oryzias_melastigma
ENSPNYG00000024076	rpusd1	98	57.329	ENSOGAG00000003795	RPUSD1	98	57.329	Otolemur_garnettii
ENSPNYG00000024076	rpusd1	98	60.465	ENSOARG00000014254	RPUSD1	98	60.133	Ovis_aries
ENSPNYG00000024076	rpusd1	98	57.605	ENSPPAG00000034797	RPUSD1	98	57.929	Pan_paniscus
ENSPNYG00000024076	rpusd1	98	59.322	ENSPPRG00000012389	RPUSD1	98	58.983	Panthera_pardus
ENSPNYG00000024076	rpusd1	99	59.259	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSPNYG00000024076	rpusd1	98	57.605	ENSPTRG00000007565	RPUSD1	98	57.929	Pan_troglodytes
ENSPNYG00000024076	rpusd1	98	57.929	ENSPANG00000024401	RPUSD1	98	58.252	Papio_anubis
ENSPNYG00000024076	rpusd1	100	68.750	ENSPKIG00000018890	rpusd1	91	68.421	Paramormyrops_kingsleyae
ENSPNYG00000024076	rpusd1	98	63.333	ENSPSIG00000013945	RPUSD1	99	62.745	Pelodiscus_sinensis
ENSPNYG00000024076	rpusd1	100	74.315	ENSPMGG00000014950	rpusd1	99	74.315	Periophthalmus_magnuspinnatus
ENSPNYG00000024076	rpusd1	98	57.525	ENSPEMG00000000497	Rpusd1	98	57.980	Peromyscus_maniculatus_bairdii
ENSPNYG00000024076	rpusd1	99	53.722	ENSPMAG00000001563	rpusd1	99	54.045	Petromyzon_marinus
ENSPNYG00000024076	rpusd1	99	62.662	ENSPCIG00000021216	-	93	62.207	Phascolarctos_cinereus
ENSPNYG00000024076	rpusd1	100	79.421	ENSPFOG00000007946	rpusd1	100	79.421	Poecilia_formosa
ENSPNYG00000024076	rpusd1	100	79.743	ENSPLAG00000011925	rpusd1	100	79.421	Poecilia_latipinna
ENSPNYG00000024076	rpusd1	100	79.421	ENSPMEG00000002910	rpusd1	100	79.421	Poecilia_mexicana
ENSPNYG00000024076	rpusd1	100	81.029	ENSPREG00000019851	rpusd1	100	81.029	Poecilia_reticulata
ENSPNYG00000024076	rpusd1	98	45.918	ENSPCAG00000002258	RPUSD1	98	46.259	Procavia_capensis
ENSPNYG00000024076	rpusd1	98	57.003	ENSPCOG00000022582	RPUSD1	98	57.003	Propithecus_coquereli
ENSPNYG00000024076	rpusd1	98	54.426	ENSPVAG00000013104	RPUSD1	98	53.746	Pteropus_vampyrus
ENSPNYG00000024076	rpusd1	99	68.027	ENSPNAG00000013806	rpusd1	99	65.986	Pygocentrus_nattereri
ENSPNYG00000024076	rpusd1	98	57.860	ENSRNOG00000023639	Rpusd1	98	58.306	Rattus_norvegicus
ENSPNYG00000024076	rpusd1	98	58.252	ENSRBIG00000030238	RPUSD1	98	58.576	Rhinopithecus_bieti
ENSPNYG00000024076	rpusd1	98	58.252	ENSRROG00000036663	RPUSD1	98	58.576	Rhinopithecus_roxellana
ENSPNYG00000024076	rpusd1	98	59.322	ENSSBOG00000033063	RPUSD1	98	58.983	Saimiri_boliviensis_boliviensis
ENSPNYG00000024076	rpusd1	98	63.300	ENSSHAG00000013500	RPUSD1	98	63.300	Sarcophilus_harrisii
ENSPNYG00000024076	rpusd1	98	72.391	ENSSFOG00015014394	rpusd1	99	71.717	Scleropages_formosus
ENSPNYG00000024076	rpusd1	100	84.566	ENSSMAG00000008045	rpusd1	93	84.566	Scophthalmus_maximus
ENSPNYG00000024076	rpusd1	100	82.958	ENSSDUG00000001829	rpusd1	97	87.781	Seriola_dumerili
ENSPNYG00000024076	rpusd1	100	82.958	ENSSLDG00000020853	rpusd1	97	87.781	Seriola_lalandi_dorsalis
ENSPNYG00000024076	rpusd1	60	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSPNYG00000024076	rpusd1	63	56.410	ENSSPUG00000005119	-	98	56.684	Sphenodon_punctatus
ENSPNYG00000024076	rpusd1	100	87.460	ENSSPAG00000012708	rpusd1	99	87.460	Stegastes_partitus
ENSPNYG00000024076	rpusd1	91	67.331	ENSSSCG00000008000	RPUSD1	98	66.929	Sus_scrofa
ENSPNYG00000024076	rpusd1	91	69.478	ENSTGUG00000015375	RPUSD1	99	69.323	Taeniopygia_guttata
ENSPNYG00000024076	rpusd1	100	80.386	ENSTRUG00000003041	rpusd1	99	80.386	Takifugu_rubripes
ENSPNYG00000024076	rpusd1	99	80.515	ENSTNIG00000002660	rpusd1	99	80.147	Tetraodon_nigroviridis
ENSPNYG00000024076	rpusd1	98	58.958	ENSTTRG00000010167	RPUSD1	81	67.194	Tursiops_truncatus
ENSPNYG00000024076	rpusd1	98	58.983	ENSUAMG00000012736	RPUSD1	98	58.644	Ursus_americanus
ENSPNYG00000024076	rpusd1	98	58.983	ENSUMAG00000021174	RPUSD1	98	58.644	Ursus_maritimus
ENSPNYG00000024076	rpusd1	98	59.661	ENSVVUG00000012357	RPUSD1	98	59.661	Vulpes_vulpes
ENSPNYG00000024076	rpusd1	98	64.527	ENSXETG00000007184	rpusd1	98	63.851	Xenopus_tropicalis
ENSPNYG00000024076	rpusd1	100	78.457	ENSXCOG00000017930	rpusd1	100	78.457	Xiphophorus_couchianus
ENSPNYG00000024076	rpusd1	100	79.100	ENSXMAG00000024084	rpusd1	100	79.100	Xiphophorus_maculatus