EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000024165 (Gene tree)
Gene ID
102215720
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Minus strand
Length
50462 bases
Position
chrJH419559.1:366638-417099
Accession
102215720
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000032019tRNA_anti-codonPF01336.255.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000032788RPA1 (1 of many)-2012913XM_005752353ENSPNYP00000032019640 (aa)XP_005752410UPI0003AF936B
Gene Model
Click here to download ENSPNYG00000024165's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000024165's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000024165RPA19963.150ENSPNYG00000016316rpa19963.150
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000024165RPA19975.469ENSAPOG00000019409RPA19971.799Acanthochromis_polyacanthus
ENSPNYG00000024165RPA19961.575ENSAPOG00000011658rpa19961.890Acanthochromis_polyacanthus
ENSPNYG00000024165RPA19759.486ENSAMEG00000007706RPA19659.486Ailuropoda_melanoleuca
ENSPNYG00000024165RPA19654.723ENSACIG00000007277rpa19954.723Amphilophus_citrinellus
ENSPNYG00000024165RPA19686.341ENSACIG00000012881RPA110086.341Amphilophus_citrinellus
ENSPNYG00000024165RPA19962.047ENSAOCG00000023376rpa19962.047Amphiprion_ocellaris
ENSPNYG00000024165RPA19981.173ENSAOCG00000009003RPA19981.173Amphiprion_ocellaris
ENSPNYG00000024165RPA19979.336ENSAPEG00000019132RPA19979.186Amphiprion_percula
ENSPNYG00000024165RPA19962.047ENSAPEG00000008634rpa19962.047Amphiprion_percula
ENSPNYG00000024165RPA19979.421ENSATEG00000006443RPA19979.573Anabas_testudineus
ENSPNYG00000024165RPA19561.678ENSATEG00000022024rpa19961.678Anabas_testudineus
ENSPNYG00000024165RPA19850.212ENSAPLG00000012442RPA110050.071Anas_platyrhynchos
ENSPNYG00000024165RPA19951.863ENSACAG00000014490RPA19951.863Anolis_carolinensis
ENSPNYG00000024165RPA19758.615ENSANAG00000023456RPA19858.615Aotus_nancymaae
ENSPNYG00000024165RPA19462.500ENSACLG00000006640rpa19962.500Astatotilapia_calliptera
ENSPNYG00000024165RPA110099.531ENSACLG00000005223RPA110099.531Astatotilapia_calliptera
ENSPNYG00000024165RPA19960.563ENSAMXG00000008418rpa19961.659Astyanax_mexicanus
ENSPNYG00000024165RPA19957.210ENSBTAG00000009711RPA19957.210Bos_taurus
ENSPNYG00000024165RPA17430.021WBGene00017546rpa-17230.021Caenorhabditis_elegans
ENSPNYG00000024165RPA19956.426ENSCJAG00000001848RPA19957.210Callithrix_jacchus
ENSPNYG00000024165RPA19957.210ENSCAFG00000019249RPA19957.524Canis_familiaris
ENSPNYG00000024165RPA19957.210ENSCAFG00020009847RPA19957.524Canis_lupus_dingo
ENSPNYG00000024165RPA19956.113ENSCHIG00000026308RPA19957.053Capra_hircus
ENSPNYG00000024165RPA19956.426ENSTSYG00000003482-9956.426Carlito_syrichta
ENSPNYG00000024165RPA19956.426ENSCPOG00000000035RPA19956.426Cavia_porcellus
ENSPNYG00000024165RPA19947.962ENSCCAG00000010981RPA19948.746Cebus_capucinus
ENSPNYG00000024165RPA19953.666ENSCLAG00000015045-9953.666Chinchilla_lanigera
ENSPNYG00000024165RPA19956.589ENSCLAG00000005185-9956.589Chinchilla_lanigera
ENSPNYG00000024165RPA19947.731ENSCSAG00000013833RPA19948.276Chlorocebus_sabaeus
ENSPNYG00000024165RPA16866.284ENSCHOG00000009454-9966.284Choloepus_hoffmanni
ENSPNYG00000024165RPA19656.352ENSCHOG00000013540-9956.352Choloepus_hoffmanni
ENSPNYG00000024165RPA19956.318ENSCPBG00000020377RPA19957.454Chrysemys_picta_bellii
ENSPNYG00000024165RPA19941.433ENSCING00000023482-9941.433Ciona_intestinalis
ENSPNYG00000024165RPA19756.522ENSCANG00000030911RPA19856.522Colobus_angolensis_palliatus
ENSPNYG00000024165RPA19957.795ENSCGRG00001008197Rpa19957.795Cricetulus_griseus_chok1gshd
ENSPNYG00000024165RPA16865.207ENSCGRG00000000582Rpa19958.523Cricetulus_griseus_crigri
ENSPNYG00000024165RPA19967.081ENSCSEG00000012726RPA19968.167Cynoglossus_semilaevis
ENSPNYG00000024165RPA19960.472ENSCSEG00000013066rpa19960.472Cynoglossus_semilaevis
ENSPNYG00000024165RPA19673.375ENSCVAG00000013446-9673.375Cyprinodon_variegatus
ENSPNYG00000024165RPA19960.472ENSCVAG00000019431rpa19962.081Cyprinodon_variegatus
ENSPNYG00000024165RPA19961.972ENSDARG00000003938rpa19961.972Danio_rerio
ENSPNYG00000024165RPA19957.098ENSDNOG00000017218RPA19857.098Dasypus_novemcinctus
ENSPNYG00000024165RPA19958.150ENSDORG00000006199Rpa19958.150Dipodomys_ordii
ENSPNYG00000024165RPA19937.129FBgn0010173RpA-709837.441Drosophila_melanogaster
ENSPNYG00000024165RPA18365.979ENSETEG00000017608RPA18265.979Echinops_telfairi
ENSPNYG00000024165RPA19464.732ENSEASG00005009372RPA19964.732Equus_asinus_asinus
ENSPNYG00000024165RPA19957.837ENSECAG00000023886RPA19957.837Equus_caballus
ENSPNYG00000024165RPA16564.593ENSEEUG00000002186-6864.593Erinaceus_europaeus
ENSPNYG00000024165RPA19962.813ENSELUG00000021071rpa19962.813Esox_lucius
ENSPNYG00000024165RPA18373.861ENSELUG00000006136RPA19973.861Esox_lucius
ENSPNYG00000024165RPA19959.091ENSFCAG00000006306RPA19959.091Felis_catus
ENSPNYG00000024165RPA110055.901ENSFALG00000006575RPA19955.901Ficedula_albicollis
ENSPNYG00000024165RPA19957.121ENSFDAG00000007720RPA19957.121Fukomys_damarensis
ENSPNYG00000024165RPA19962.205ENSFHEG00000003580rpa19962.205Fundulus_heteroclitus
ENSPNYG00000024165RPA19959.528ENSGMOG00000010382rpa19959.528Gadus_morhua
ENSPNYG00000024165RPA110055.263ENSGALG00000003072RPA19955.263Gallus_gallus
ENSPNYG00000024165RPA110075.303ENSGAFG00000020953RPA110075.303Gambusia_affinis
ENSPNYG00000024165RPA19961.417ENSGAFG00000012916rpa19961.417Gambusia_affinis
ENSPNYG00000024165RPA19959.528ENSGACG00000010856rpa19959.528Gasterosteus_aculeatus
ENSPNYG00000024165RPA19956.786ENSGAGG00000013611RPA19956.786Gopherus_agassizii
ENSPNYG00000024165RPA19955.799ENSGGOG00000014186RPA19955.799Gorilla_gorilla
ENSPNYG00000024165RPA19962.992ENSHBUG00000017773rpa19962.992Haplochromis_burtoni
ENSPNYG00000024165RPA19674.878ENSHBUG00000009348RPA19974.878Haplochromis_burtoni
ENSPNYG00000024165RPA19957.210ENSHGLG00000008846RPA19957.367Heterocephalus_glaber_female
ENSPNYG00000024165RPA19957.210ENSHGLG00100017755-9957.367Heterocephalus_glaber_male
ENSPNYG00000024165RPA19948.823ENSHGLG00100002005-9948.980Heterocephalus_glaber_male
ENSPNYG00000024165RPA19953.208ENSHGLG00100000799-9953.208Heterocephalus_glaber_male
ENSPNYG00000024165RPA110048.068ENSHCOG00000000351RPA19856.808Hippocampus_comes
ENSPNYG00000024165RPA19956.338ENSHCOG00000001401rpa19955.956Hippocampus_comes
ENSPNYG00000024165RPA19962.598ENSIPUG00000004400rpa19962.285Ictalurus_punctatus
ENSPNYG00000024165RPA19554.309ENSSTOG00000022475RPA19754.309Ictidomys_tridecemlineatus
ENSPNYG00000024165RPA19657.861ENSJJAG00000000876Rpa19857.861Jaculus_jaculus
ENSPNYG00000024165RPA110075.195ENSKMAG00000000234RPA110075.351Kryptolebias_marmoratus
ENSPNYG00000024165RPA19960.592ENSKMAG00000005605rpa19960.911Kryptolebias_marmoratus
ENSPNYG00000024165RPA19959.561ENSLBEG00000021604rpa19959.561Labrus_bergylta
ENSPNYG00000024165RPA19970.099ENSLBEG00000002281RPA19583.686Labrus_bergylta
ENSPNYG00000024165RPA17358.439ENSLACG00000007210RPA19558.439Latimeria_chalumnae
ENSPNYG00000024165RPA19960.000ENSLOCG00000006397rpa19960.000Lepisosteus_oculatus
ENSPNYG00000024165RPA19757.166ENSLAFG00000015354RPA19954.683Loxodonta_africana
ENSPNYG00000024165RPA18255.810ENSMFAG00000036138-9856.489Macaca_fascicularis
ENSPNYG00000024165RPA19757.074ENSMMUG00000011604-9857.649Macaca_mulatta
ENSPNYG00000024165RPA19952.665ENSMMUG00000002442-9952.665Macaca_mulatta
ENSPNYG00000024165RPA19656.564ENSMNEG00000031632-9856.818Macaca_nemestrina
ENSPNYG00000024165RPA18959.778ENSMNEG00000029837-9959.778Macaca_nemestrina
ENSPNYG00000024165RPA19753.933ENSMLEG00000038768-9853.933Mandrillus_leucophaeus
ENSPNYG00000024165RPA19961.102ENSMAMG00000017993rpa19961.102Mastacembelus_armatus
ENSPNYG00000024165RPA19977.381ENSMAMG00000020097RPA19977.381Mastacembelus_armatus
ENSPNYG00000024165RPA110099.531ENSMZEG00005024731RPA110099.531Maylandia_zebra
ENSPNYG00000024165RPA19962.992ENSMZEG00005007551rpa19962.992Maylandia_zebra
ENSPNYG00000024165RPA19954.930ENSMGAG00000005315RPA19854.930Meleagris_gallopavo
ENSPNYG00000024165RPA19657.581ENSMAUG00000010474Rpa19857.903Mesocricetus_auratus
ENSPNYG00000024165RPA19958.242ENSMICG00000012867RPA19958.399Microcebus_murinus
ENSPNYG00000024165RPA19957.256ENSMOCG00000013019Rpa19957.256Microtus_ochrogaster
ENSPNYG00000024165RPA19384.928ENSMMOG00000010868RPA19884.928Mola_mola
ENSPNYG00000024165RPA19661.912ENSMMOG00000014292rpa19961.912Mola_mola
ENSPNYG00000024165RPA19956.299ENSMODG00000010549RPA19956.299Monodelphis_domestica
ENSPNYG00000024165RPA19978.517ENSMALG00000001208RPA19978.517Monopterus_albus
ENSPNYG00000024165RPA19961.164ENSMALG00000011453rpa19961.164Monopterus_albus
ENSPNYG00000024165RPA19958.399MGP_CAROLIEiJ_G0016734Rpa19958.399Mus_caroli
ENSPNYG00000024165RPA19957.994ENSMUSG00000000751Rpa19957.994Mus_musculus
ENSPNYG00000024165RPA19957.928MGP_PahariEiJ_G0017871Rpa19957.928Mus_pahari
ENSPNYG00000024165RPA19957.837MGP_SPRETEiJ_G0017577Rpa19957.837Mus_spretus
ENSPNYG00000024165RPA19957.994ENSMPUG00000013119RPA19957.994Mustela_putorius_furo
ENSPNYG00000024165RPA19757.488ENSMLUG00000006113RPA19557.488Myotis_lucifugus
ENSPNYG00000024165RPA19757.006ENSNGAG00000004522Rpa19657.006Nannospalax_galili
ENSPNYG00000024165RPA19986.278ENSNBRG00000009672RPA19786.278Neolamprologus_brichardi
ENSPNYG00000024165RPA19561.818ENSNBRG00000020595rpa19961.818Neolamprologus_brichardi
ENSPNYG00000024165RPA19956.897ENSNLEG00000017149RPA19957.210Nomascus_leucogenys
ENSPNYG00000024165RPA19749.275ENSMEUG00000006714RPA19849.275Notamacropus_eugenii
ENSPNYG00000024165RPA19657.143ENSODEG00000009038RPA19657.143Octodon_degus
ENSPNYG00000024165RPA19962.205ENSONIG00000013135rpa19962.205Oreochromis_niloticus
ENSPNYG00000024165RPA19856.825ENSOANG00000010880RPA19956.825Ornithorhynchus_anatinus
ENSPNYG00000024165RPA19955.083ENSOCUG00000001504RPA19955.083Oryctolagus_cuniculus
ENSPNYG00000024165RPA19960.787ENSORLG00000004856rpa19960.787Oryzias_latipes
ENSPNYG00000024165RPA19974.924ENSORLG00000003368RPA19974.924Oryzias_latipes
ENSPNYG00000024165RPA19973.582ENSORLG00020015284RPA19973.582Oryzias_latipes_hni
ENSPNYG00000024165RPA19960.630ENSORLG00020008980rpa19960.630Oryzias_latipes_hni
ENSPNYG00000024165RPA16782.258ENSORLG00015005867-9982.258Oryzias_latipes_hsok
ENSPNYG00000024165RPA19976.006ENSORLG00015020383RPA19976.006Oryzias_latipes_hsok
ENSPNYG00000024165RPA19960.630ENSORLG00015013982rpa19960.630Oryzias_latipes_hsok
ENSPNYG00000024165RPA19958.898ENSOMEG00000004704rpa19958.898Oryzias_melastigma
ENSPNYG00000024165RPA19972.126ENSOMEG00000011040RPA19874.225Oryzias_melastigma
ENSPNYG00000024165RPA17863.874ENSOGAG00000029379-9963.874Otolemur_garnettii
ENSPNYG00000024165RPA19956.113ENSOGAG00000005581-9956.113Otolemur_garnettii
ENSPNYG00000024165RPA19956.113ENSOARG00000014479RPA19957.053Ovis_aries
ENSPNYG00000024165RPA19957.210ENSPPAG00000039680RPA19957.210Pan_paniscus
ENSPNYG00000024165RPA19959.034ENSPPRG00000011807RPA19959.034Panthera_pardus
ENSPNYG00000024165RPA19959.248ENSPTIG00000007898RPA19959.248Panthera_tigris_altaica
ENSPNYG00000024165RPA19957.053ENSPTRG00000008539RPA19957.053Pan_troglodytes
ENSPNYG00000024165RPA19956.495ENSPANG00000024592RPA19957.053Papio_anubis
ENSPNYG00000024165RPA19561.576ENSPKIG00000008053rpa19461.905Paramormyrops_kingsleyae
ENSPNYG00000024165RPA19756.592ENSPSIG00000015617RPA19856.592Pelodiscus_sinensis
ENSPNYG00000024165RPA19965.635ENSPMGG00000000543RPA19970.805Periophthalmus_magnuspinnatus
ENSPNYG00000024165RPA19661.011ENSPMGG00000011589rpa19860.196Periophthalmus_magnuspinnatus
ENSPNYG00000024165RPA19957.165ENSPEMG00000021061Rpa19957.165Peromyscus_maniculatus_bairdii
ENSPNYG00000024165RPA19955.607ENSPCIG00000019049RPA19956.075Phascolarctos_cinereus
ENSPNYG00000024165RPA19961.890ENSPFOG00000003987rpa19961.890Poecilia_formosa
ENSPNYG00000024165RPA19576.045ENSPLAG00000008844-9776.045Poecilia_latipinna
ENSPNYG00000024165RPA19961.635ENSPLAG00000004984rpa19961.635Poecilia_latipinna
ENSPNYG00000024165RPA19961.890ENSPMEG00000020602rpa19961.890Poecilia_mexicana
ENSPNYG00000024165RPA19576.045ENSPMEG00000003627-9776.045Poecilia_mexicana
ENSPNYG00000024165RPA110072.941ENSPREG00000010119RPA110072.941Poecilia_reticulata
ENSPNYG00000024165RPA19455.354ENSPREG00000010174rpa19655.354Poecilia_reticulata
ENSPNYG00000024165RPA19957.143ENSPCOG00000001799RPA19957.143Propithecus_coquereli
ENSPNYG00000024165RPA19957.165ENSPVAG00000002149RPA19957.165Pteropus_vampyrus
ENSPNYG00000024165RPA19954.589ENSPNAG00000008599rpa19954.037Pygocentrus_nattereri
ENSPNYG00000024165RPA19660.664ENSRNOG00000003123Rpa19958.150Rattus_norvegicus
ENSPNYG00000024165RPA19956.386ENSRBIG00000036587RPA19956.386Rhinopithecus_bieti
ENSPNYG00000024165RPA19952.960ENSRROG00000043278RPA19952.960Rhinopithecus_roxellana
ENSPNYG00000024165RPA16836.689YAR007CRFA17136.689Saccharomyces_cerevisiae
ENSPNYG00000024165RPA19158.020ENSSBOG00000030233RPA19758.874Saimiri_boliviensis_boliviensis
ENSPNYG00000024165RPA19757.810ENSSHAG00000007969RPA19658.039Sarcophilus_harrisii
ENSPNYG00000024165RPA19963.438ENSSFOG00015005362rpa19263.438Scleropages_formosus
ENSPNYG00000024165RPA19976.586ENSSMAG00000019746RPA19976.586Scophthalmus_maximus
ENSPNYG00000024165RPA19962.205ENSSDUG00000011949rpa19962.205Seriola_dumerili
ENSPNYG00000024165RPA19979.087ENSSDUG00000016358RPA19979.234Seriola_dumerili
ENSPNYG00000024165RPA19961.732ENSSLDG00000011806rpa19961.732Seriola_lalandi_dorsalis
ENSPNYG00000024165RPA19978.070ENSSLDG00000020784RPA19978.070Seriola_lalandi_dorsalis
ENSPNYG00000024165RPA19747.504ENSSARG00000007506RPA19847.504Sorex_araneus
ENSPNYG00000024165RPA19755.233ENSSPUG00000007223RPA19855.233Sphenodon_punctatus
ENSPNYG00000024165RPA19875.676ENSSPAG00000011165RPA19875.517Stegastes_partitus
ENSPNYG00000024165RPA19961.732ENSSPAG00000009903rpa19961.732Stegastes_partitus
ENSPNYG00000024165RPA19757.878ENSSSCG00000017822RPA19858.132Sus_scrofa
ENSPNYG00000024165RPA110055.296ENSTGUG00000005775RPA19955.296Taeniopygia_guttata
ENSPNYG00000024165RPA19967.181ENSTRUG00000000405RPA19967.181Takifugu_rubripes
ENSPNYG00000024165RPA19961.260ENSTRUG00000003616rpa19961.260Takifugu_rubripes
ENSPNYG00000024165RPA19962.107ENSTNIG00000016199rpa19962.107Tetraodon_nigroviridis
ENSPNYG00000024165RPA17365.297ENSTBEG00000002709RPA17965.297Tupaia_belangeri
ENSPNYG00000024165RPA19955.172ENSTTRG00000001169RPA19956.113Tursiops_truncatus
ENSPNYG00000024165RPA18775.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSPNYG00000024165RPA19957.680ENSUMAG00000009328RPA19958.307Ursus_maritimus
ENSPNYG00000024165RPA19955.521ENSVPAG00000009443RPA19955.521Vicugna_pacos
ENSPNYG00000024165RPA19956.583ENSVVUG00000021715RPA19956.897Vulpes_vulpes
ENSPNYG00000024165RPA19957.477ENSXETG00000013538rpa19958.346Xenopus_tropicalis
ENSPNYG00000024165RPA19672.059ENSXCOG00000009899-10072.059Xiphophorus_couchianus
ENSPNYG00000024165RPA19361.037ENSXCOG00000010068rpa19461.552Xiphophorus_couchianus
ENSPNYG00000024165RPA19961.260ENSXMAG00000004102rpa19961.745Xiphophorus_maculatus
ENSPNYG00000024165RPA110069.929ENSXMAG00000010333RPA110069.929Xiphophorus_maculatus

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